RNA–Protein interactions for RNA: ENST00000481605.5

TTC3-217, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 1,540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-217ENST00000481605 COL9A1P20849 921 aa26.29■■□□□ 1.8
TTC3-217ENST00000481605 SSTR3P32745 418 aaPredicted RBP26.29■■□□□ 1.8
TTC3-217ENST00000481605 FOSBP53539 338 aa26.29■■□□□ 1.8
TTC3-217ENST00000481605 ADAM15Q13444 863 aa26.29■■□□□ 1.8
TTC3-217ENST00000481605 CSPP1Q1MSJ5 1256 aa26.29■■□□□ 1.8
TTC3-217ENST00000481605 LRRC55Q6ZSA7 311 aa26.29■■□□□ 1.8
TTC3-217ENST00000481605 KSR1Q8IVT5 923 aa26.29■■□□□ 1.8
TTC3-217ENST00000481605 ZNF579Q8NAF0 562 aaKnown RBP26.29■■□□□ 1.8
TTC3-217ENST00000481605 MICAL1Q8TDZ2 1067 aa26.29■■□□□ 1.8
TTC3-217ENST00000481605 SLC7A3Q8WY07 619 aa26.29■■□□□ 1.8
TTC3-217ENST00000481605 NLRP4Q96MN2 994 aa26.29■■□□□ 1.8
TTC3-217ENST00000481605 LXNQ9BS40 222 aa26.29■■□□□ 1.8
TTC3-217ENST00000481605 RGL1Q9NZL6 768 aa26.29■■□□□ 1.8
TTC3-217ENST00000481605 BTBD18B2RXH4 712 aa26.29■■□□□ 1.8
TTC3-217ENST00000481605 SFPQP23246 707 aaKnown RBP eCLIP26.29■■□□□ 1.85e-8■■■□□ 17.3
TTC3-217ENST00000481605 SPIRE1Q08AE8 756 aa26.29■■□□□ 1.8
TTC3-217ENST00000481605 RBM23Q86U06 439 aaKnown RBP26.29■■□□□ 1.8
TTC3-217ENST00000481605 C4orf19Q8IY42 314 aa26.29■■□□□ 1.8
TTC3-217ENST00000481605 LRRC43Q8N309 656 aa26.29■■□□□ 1.8
TTC3-217ENST00000481605 INO80BQ9C086 356 aaPredicted RBP26.29■■□□□ 1.8
TTC3-217ENST00000481605 TLR9Q9NR96 1032 aa26.29■■□□□ 1.8
TTC3-217ENST00000481605 CHST12Q9NRB3 414 aa26.29■■□□□ 1.8
TTC3-217ENST00000481605 EOMESO95936 686 aa26.28■■□□□ 1.8
TTC3-217ENST00000481605 NRIP1P48552 1158 aa26.28■■□□□ 1.8
TTC3-217ENST00000481605 NDUFV1P49821 464 aa26.28■■□□□ 1.8
TTC3-217ENST00000481605 POLGP54098 1239 aaPredicted RBP26.28■■□□□ 1.8
TTC3-217ENST00000481605 TRIM29Q14134 588 aa26.28■■□□□ 1.8
TTC3-217ENST00000481605 CLLU1OSQ5K130 101 aa26.28■■□□□ 1.8
TTC3-217ENST00000481605 ZNF598Q86UK7 904 aaKnown RBP26.28■■□□□ 1.8
TTC3-217ENST00000481605 DYDC2Q96IM9 177 aa26.28■■□□□ 1.8
TTC3-217ENST00000481605 ATF7P17544 494 aaPredicted RBP26.27■■□□□ 1.8
TTC3-217ENST00000481605 YWHABP31946 246 aaKnown RBP26.27■■□□□ 1.8
TTC3-217ENST00000481605 DIS3L2Q8IYB7 885 aaKnown RBP26.27■■□□□ 1.8
TTC3-217ENST00000481605 EXOC8Q8IYI6 725 aa26.27■■□□□ 1.8
TTC3-217ENST00000481605 EFHBQ8N7U6 833 aa26.27■■□□□ 1.8
TTC3-217ENST00000481605 DHX33Q9H6R0 707 aaKnown RBP26.27■■□□□ 1.8
TTC3-217ENST00000481605 PPME1Q9Y570 386 aa26.27■■□□□ 1.8
TTC3-217ENST00000481605 C5orf42Q9H799 3197 aa26.27■■□□□ 1.8
TTC3-217ENST00000481605 ERVFC1P60507 584 aa26.26■■□□□ 1.79
TTC3-217ENST00000481605 CYP4A11Q02928 519 aa26.26■■□□□ 1.79
TTC3-217ENST00000481605 ST3GAL1Q11201 340 aa26.26■■□□□ 1.79
TTC3-217ENST00000481605 CTTNQ14247 550 aaKnown RBP26.26■■□□□ 1.79
TTC3-217ENST00000481605 KCNT2Q6UVM3 1135 aa26.26■■□□□ 1.79
TTC3-217ENST00000481605 OTUD6AQ7L8S5 288 aa26.26■■□□□ 1.79
TTC3-217ENST00000481605 ZSWIM4Q9H7M6 989 aa26.26■■□□□ 1.79
TTC3-217ENST00000481605 PRKAG3Q9UGI9 489 aa26.26■■□□□ 1.79
TTC3-217ENST00000481605 PIN4Q9Y237 131 aaKnown RBP26.26■■□□□ 1.79
TTC3-217ENST00000481605 COL4A3BPQ9Y5P4 624 aa26.26■■□□□ 1.79
TTC3-217ENST00000481605 MBTPS2O43462 519 aa26.25■■□□□ 1.79
TTC3-217ENST00000481605 PBX3P40426 434 aa26.25■■□□□ 1.79
TTC3-217ENST00000481605 CALCRLQ16602 461 aa26.25■■□□□ 1.79
TTC3-217ENST00000481605 TWF2Q6IBS0 349 aaKnown RBP26.25■■□□□ 1.79
TTC3-217ENST00000481605 HELQQ8TDG4 1101 aa26.25■■□□□ 1.79
TTC3-217ENST00000481605 TMEM143Q96AN5 459 aa26.25■■□□□ 1.79
TTC3-217ENST00000481605 ZNF558Q96NG5 402 aa26.25■■□□□ 1.79
TTC3-217ENST00000481605 TLE6Q9H808 572 aa26.25■■□□□ 1.79
TTC3-217ENST00000481605 IFT122Q9HBG6 1241 aa26.25■■□□□ 1.79
TTC3-217ENST00000481605 BMP2KQ9NSY1 1161 aaPredicted RBP26.25■■□□□ 1.79
TTC3-217ENST00000481605 CD207Q9UJ71 328 aa26.25■■□□□ 1.79
TTC3-217ENST00000481605 PCDHA12Q9UN75 941 aa26.25■■□□□ 1.79
TTC3-217ENST00000481605 ZBTB39O15060 712 aa26.24■■□□□ 1.79
TTC3-217ENST00000481605 RFC5P40937 340 aa26.24■■□□□ 1.79
TTC3-217ENST00000481605 PHKA2P46019 1235 aa26.24■■□□□ 1.79
TTC3-217ENST00000481605 PLCB3Q01970 1234 aa26.24■■□□□ 1.79
TTC3-217ENST00000481605 ZP2Q05996 745 aa26.24■■□□□ 1.79
TTC3-217ENST00000481605 SMAD4Q13485 552 aaKnown RBP26.24■■□□□ 1.79
TTC3-217ENST00000481605 SMAD2Q15796 467 aaKnown RBP26.24■■□□□ 1.79
TTC3-217ENST00000481605 CATSPER4Q7RTX7 472 aa26.24■■□□□ 1.79
TTC3-217ENST00000481605 TPH2Q8IWU9 490 aa26.24■■□□□ 1.79
TTC3-217ENST00000481605 PRPF31Q8WWY3 499 aaKnown RBP26.24■■□□□ 1.79
TTC3-217ENST00000481605 PSPC1Q8WXF1 523 aaKnown RBP26.24■■□□□ 1.79
TTC3-217ENST00000481605 MRPS27Q92552 414 aaKnown RBP26.24■■□□□ 1.79
TTC3-217ENST00000481605 MSLNLQ96KJ4 702 aa26.24■■□□□ 1.79
TTC3-217ENST00000481605 TRAIPQ9BWF2 469 aa26.24■■□□□ 1.79
TTC3-217ENST00000481605 PUF60Q9UHX1 559 aaKnown RBP26.24■■□□□ 1.79
TTC3-217ENST00000481605 LZTS1Q9Y250 596 aa26.24■■□□□ 1.79
TTC3-217ENST00000481605 PI4K2BG5E9Z4 385 aa26.24■■□□□ 1.79
TTC3-217ENST00000481605 WNT7AO00755 349 aa26.24■■□□□ 1.79
TTC3-217ENST00000481605 PER2O15055 1255 aa26.24■■□□□ 1.79
TTC3-217ENST00000481605 XKR9Q5GH70 373 aa26.24■■□□□ 1.79
TTC3-217ENST00000481605 PDE12Q6L8Q7 609 aaKnown RBP26.24■■□□□ 1.79
TTC3-217ENST00000481605 ADHFE1Q8IWW8 467 aa26.24■■□□□ 1.79
TTC3-217ENST00000481605 CLEC1BQ9P126 229 aa26.24■■□□□ 1.79
TTC3-217ENST00000481605 NEMFO60524 1076 aa26.23■■□□□ 1.79
TTC3-217ENST00000481605 SLITRK3O94933 977 aa26.23■■□□□ 1.79
TTC3-217ENST00000481605 GLP2RO95838 553 aa26.23■■□□□ 1.79
TTC3-217ENST00000481605 SRGAP2CP0DJJ0 459 aa26.23■■□□□ 1.79
TTC3-217ENST00000481605 PPM1AP35813 382 aa26.23■■□□□ 1.79
TTC3-217ENST00000481605 EIF2AK1Q9BQI3 630 aaKnown RBP26.23■■□□□ 1.79
TTC3-217ENST00000481605 TTC12Q9H892 705 aaPredicted RBP26.23■■□□□ 1.79
TTC3-217ENST00000481605 RAPGEFL1Q9UHV5 662 aa26.23■■□□□ 1.79
TTC3-217ENST00000481605 LIMCH1Q9UPQ0 1083 aa26.23■■□□□ 1.79
TTC3-217ENST00000481605 FSCN2O14926 492 aa26.22■■□□□ 1.79
TTC3-217ENST00000481605 GAS2O43903 313 aaKnown RBP26.22■■□□□ 1.79
TTC3-217ENST00000481605 SKIP12755 728 aa26.22■■□□□ 1.79
TTC3-217ENST00000481605 EMC2Q15006 297 aa26.22■■□□□ 1.79
TTC3-217ENST00000481605 LONRF3Q496Y0 759 aa26.22■■□□□ 1.79
TTC3-217ENST00000481605 LPPQ93052 612 aa26.22■■□□□ 1.79
TTC3-217ENST00000481605 MRPL9Q9BYD2 267 aaKnown RBP26.22■■□□□ 1.79
TTC3-217ENST00000481605 FAM105AQ9NUU6 356 aa26.22■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms