RNA–Protein interactions for RNA: ENST00000481484.1

VPS13D-208, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 360 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-208ENST00000481484 PAK2Q13177 524 aa4.7□□□□□ -1.66
VPS13D-208ENST00000481484 GPNMBQ14956 572 aa4.7□□□□□ -1.66
VPS13D-208ENST00000481484 CCDC85BQ15834 202 aaPredicted RBP4.7□□□□□ -1.66
VPS13D-208ENST00000481484 UBE2SQ16763 222 aa4.7□□□□□ -1.66
VPS13D-208ENST00000481484 LEXMQ3ZCV2 418 aa4.7□□□□□ -1.66
VPS13D-208ENST00000481484 EPC2Q52LR7 807 aa4.7□□□□□ -1.66
VPS13D-208ENST00000481484 ZNF484Q5JVG2 852 aa4.7□□□□□ -1.66
VPS13D-208ENST00000481484 FBXO47Q5MNV8 452 aa4.7□□□□□ -1.66
VPS13D-208ENST00000481484 UTP14CQ5TAP6 766 aaKnown RBP4.7□□□□□ -1.66
VPS13D-208ENST00000481484 ZNF746Q6NUN9 644 aaPredicted RBP4.7□□□□□ -1.66
VPS13D-208ENST00000481484 MIS18BP1Q6P0N0 1132 aa4.7□□□□□ -1.66
VPS13D-208ENST00000481484 CPLX2Q6PUV4 134 aaKnown RBP4.7□□□□□ -1.66
VPS13D-208ENST00000481484 TMEM192Q8IY95 271 aa4.7□□□□□ -1.66
VPS13D-208ENST00000481484 TRIM22Q8IYM9 498 aa4.7□□□□□ -1.66
VPS13D-208ENST00000481484 FIBCD1Q8N539 461 aa4.7□□□□□ -1.66
VPS13D-208ENST00000481484 RDM1Q8NG50 284 aa4.7□□□□□ -1.66
VPS13D-208ENST00000481484 RNF217Q8TC41 542 aa4.7□□□□□ -1.66
VPS13D-208ENST00000481484 ATP8B4Q8TF62 1192 aa4.7□□□□□ -1.66
VPS13D-208ENST00000481484 PIBF1Q8WXW3 757 aa4.7□□□□□ -1.66
VPS13D-208ENST00000481484 PPM1EQ8WY54 764 aa4.7□□□□□ -1.66
VPS13D-208ENST00000481484 KCNB2Q92953 911 aa4.7□□□□□ -1.66
VPS13D-208ENST00000481484 CLP1Q92989 425 aaKnown RBP4.7□□□□□ -1.66
VPS13D-208ENST00000481484 PABPC5Q96DU9 382 aaKnown RBP4.7□□□□□ -1.66
VPS13D-208ENST00000481484 IL17RAQ96F46 866 aa4.7□□□□□ -1.66
VPS13D-208ENST00000481484 MAP7D2Q96T17 732 aa4.7□□□□□ -1.66
VPS13D-208ENST00000481484 RNF26Q9BY78 433 aaPredicted RBP4.7□□□□□ -1.66
VPS13D-208ENST00000481484 ZMYND12Q9H0C1 365 aa4.7□□□□□ -1.66
VPS13D-208ENST00000481484 C6orf50Q9HD87 102 aa4.7□□□□□ -1.66
VPS13D-208ENST00000481484 CYLDQ9NQC7 956 aa4.7□□□□□ -1.66
VPS13D-208ENST00000481484 SH3GLB2Q9NR46 395 aa4.7□□□□□ -1.66
VPS13D-208ENST00000481484 KCNH7Q9NS40 1196 aa4.7□□□□□ -1.66
VPS13D-208ENST00000481484 TBC1D22BQ9NU19 505 aa4.7□□□□□ -1.66
VPS13D-208ENST00000481484 SETD4Q9NVD3 440 aa4.7□□□□□ -1.66
VPS13D-208ENST00000481484 PCDHA6Q9UN73 950 aa4.7□□□□□ -1.66
VPS13D-208ENST00000481484 PCDHA8Q9Y5H6 950 aa4.7□□□□□ -1.66
VPS13D-208ENST00000481484 TDRD15B5MCY1 1934 aaKnown RBP4.7□□□□□ -1.66
VPS13D-208ENST00000481484 TECTAO75443 2155 aa4.7□□□□□ -1.66
VPS13D-208ENST00000481484 IGKV6D-21A0A0A0MT36 114 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.69□□□□□ -1.66
VPS13D-208ENST00000481484 GSTTP1A0A1W2PQM5 241 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 SMCO2A6NFE2 343 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 IPO5O00410 1097 aaKnown RBP4.69□□□□□ -1.66
VPS13D-208ENST00000481484 BACH1O14867 736 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 MAGEB2O15479 319 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 TRAK2O60296 914 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 SORBS3O60504 671 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 CDKL5O76039 1030 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 ARHGEF15O94989 841 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 ATG7O95352 703 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 PSAPP07602 524 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 IFNAR1P17181 557 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 RXRAP19793 462 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 MARK3P27448 753 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 TMOD1P28289 359 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 SFNP31947 248 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 CIITAP33076 1130 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 HSPA4P34932 840 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 PPM1AP35813 382 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 ZNF76P36508 570 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 RNF144AP50876 292 aaPredicted RBP4.69□□□□□ -1.66
VPS13D-208ENST00000481484 STAT5BP51692 787 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 ZNF200P98182 395 aaPredicted RBP4.69□□□□□ -1.66
VPS13D-208ENST00000481484 CDC42EP1Q00587 391 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 EXOSC10Q01780 885 aaKnown RBP4.69□□□□□ -1.66
VPS13D-208ENST00000481484 UBE3AQ05086 875 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 LPIN1Q14693 890 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 FOXD4L5Q5VV16 416 aaPredicted RBP4.69□□□□□ -1.66
VPS13D-208ENST00000481484 GALNT17Q6IS24 598 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 MOXD1Q6UVY6 613 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 PHTF2Q8N3S3 785 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 CRYGNQ8WXF5 182 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 NANOS1Q8WY41 292 aaKnown RBP4.69□□□□□ -1.66
VPS13D-208ENST00000481484 JAKMIP1Q96N16 626 aaKnown RBP4.69□□□□□ -1.66
VPS13D-208ENST00000481484 RIT2Q99578 217 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 NAP1L4Q99733 375 aaKnown RBP4.69□□□□□ -1.66
VPS13D-208ENST00000481484 JPH2Q9BR39 696 aaPredicted RBP4.69□□□□□ -1.66
VPS13D-208ENST00000481484 AGXT2Q9BYV1 514 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 CERS4Q9HA82 394 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 SUGCTQ9HAC7 445 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 AGO4Q9HCK5 861 aaKnown RBP4.69□□□□□ -1.66
VPS13D-208ENST00000481484 RTEL1Q9NZ71 1219 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 STK17AQ9UEE5 414 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 STK39Q9UEW8 545 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 MTUS1Q9ULD2 1270 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 LRFN2Q9ULH4 789 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 PPME1Q9Y570 386 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 CDY2AQ9Y6F7 541 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 WDFY4Q6ZS81 3184 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 STK36Q9NRP7 1315 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 KMT2EQ8IZD2 1858 aa4.69□□□□□ -1.66
VPS13D-208ENST00000481484 GVINP1Q7Z2Y8 2422 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 SPTBN4Q9H254 2564 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 ZMYM2Q9UBW7 1377 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 IGLV3-22A0A075B6J6 115 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 DENND3A2RUS2 1198 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 CPLX1O14810 134 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 GPR182O15218 404 aa4.68□□□□□ -1.66
VPS13D-208ENST00000481484 PRPF3O43395 683 aaKnown RBP4.68□□□□□ -1.66
VPS13D-208ENST00000481484 GAS2O43903 313 aaKnown RBP4.68□□□□□ -1.66
VPS13D-208ENST00000481484 DKC1O60832 514 aaKnown RBP eCLIP4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms