RNA–Protein interactions for RNA: ENST00000481242.5

GARNL3-216, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2

Gene GARNL3, Length 4,816 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-216ENST00000481242 PWP2Q15269 919 aaKnown RBP10.15□□□□□ -0.78
GARNL3-216ENST00000481242 KRT31Q15323 416 aa10.15□□□□□ -0.78
GARNL3-216ENST00000481242 SLFNL1Q499Z3 407 aa10.15□□□□□ -0.78
GARNL3-216ENST00000481242 TADA2BQ86TJ2 420 aa10.15□□□□□ -0.78
GARNL3-216ENST00000481242 GRAMD1CQ8IYS0 662 aa10.15□□□□□ -0.78
GARNL3-216ENST00000481242 TRPV6Q9H1D0 765 aa10.15□□□□□ -0.78
GARNL3-216ENST00000481242 NHEJ1Q9H9Q4 299 aaPredicted RBP10.15□□□□□ -0.78
GARNL3-216ENST00000481242 MYOZ2Q9NPC6 264 aa10.15□□□□□ -0.78
GARNL3-216ENST00000481242 SAMSN1Q9NSI8 373 aaKnown RBP10.15□□□□□ -0.78
GARNL3-216ENST00000481242 INPP5FQ9Y2H2 1132 aa10.15□□□□□ -0.78
GARNL3-216ENST00000481242 USP32Q8NFA0 1604 aa10.15□□□□□ -0.78
GARNL3-216ENST00000481242 MYO1CO00159 1063 aa10.15□□□□□ -0.79
GARNL3-216ENST00000481242 RFC5P40937 340 aa10.15□□□□□ -0.79
GARNL3-216ENST00000481242 GMPSP49915 693 aaPredicted RBP10.15□□□□□ -0.79
GARNL3-216ENST00000481242 IL9RQ01113 521 aa10.15□□□□□ -0.79
GARNL3-216ENST00000481242 GUCY2DQ02846 1103 aa10.15□□□□□ -0.79
GARNL3-216ENST00000481242 KCNB1Q14721 858 aa10.15□□□□□ -0.79
GARNL3-216ENST00000481242 IQCB1Q15051 598 aa10.15□□□□□ -0.79
GARNL3-216ENST00000481242 ANGEL2Q5VTE6 544 aaKnown RBP10.15□□□□□ -0.79
GARNL3-216ENST00000481242 IER5Q5VY09 327 aa10.15□□□□□ -0.79
GARNL3-216ENST00000481242 OR6J1Q8NGC5 347 aa10.15□□□□□ -0.79
GARNL3-216ENST00000481242 RIT2Q99578 217 aa10.15□□□□□ -0.79
GARNL3-216ENST00000481242 POLR3FQ9H1D9 316 aaPredicted RBP10.15□□□□□ -0.79
GARNL3-216ENST00000481242 HPCAL4Q9UM19 191 aa10.15□□□□□ -0.79
GARNL3-216ENST00000481242 FARP1Q9Y4F1 1045 aaPredicted RBP10.15□□□□□ -0.79
GARNL3-216ENST00000481242 PPP2R3BQ9Y5P8 575 aa10.15□□□□□ -0.79
GARNL3-216ENST00000481242 RIMBP3CA6NJZ7 1639 aa10.15□□□□□ -0.79
GARNL3-216ENST00000481242 RIMBP3BA6NNM3 1639 aa10.15□□□□□ -0.79
GARNL3-216ENST00000481242 RIMBP3Q9UFD9 1639 aa10.15□□□□□ -0.79
GARNL3-216ENST00000481242 CCDC160A6NGH7 325 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 SLC16A4O15374 487 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 MYBL1P10243 752 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 SNRPFP62306 86 aaKnown RBP10.14□□□□□ -0.79
GARNL3-216ENST00000481242 TAP1Q03518 808 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 ITPK1Q13572 414 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 TSNAXIP1Q2TAA8 658 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 ANKRD42Q8N9B4 389 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 GPRC5AQ8NFJ5 357 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 LRRC8CQ8TDW0 803 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 EIF2AK1Q9BQI3 630 aaKnown RBP10.14□□□□□ -0.79
GARNL3-216ENST00000481242 BPIFA3Q9BQP9 254 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 MAGEB5Q9BZ81 275 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 GPBP1L1Q9HC44 474 aaPredicted RBP10.14□□□□□ -0.79
GARNL3-216ENST00000481242 SPTLC3Q9NUV7 552 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 POTEB3A0JP26 581 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 ZBBXA8MT70 800 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 POTECB2RU33 542 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 KIF28PB7ZC32 967 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 PODXLO00592 558 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 PAMP19021 973 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 PSMA2P25787 234 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 VAMP7P51809 220 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 RAD51Q06609 339 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 SCARF1Q14162 830 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 POTEBQ6S5H4 581 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 GPD1LQ8N335 351 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 SLC35F6Q8N357 371 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 DDX50Q9BQ39 737 aaKnown RBP10.14□□□□□ -0.79
GARNL3-216ENST00000481242 HAUS8Q9BT25 410 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 VPS33BQ9H267 617 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 CXorf56Q9H5V9 222 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 PPRC1Q5VV67 1664 aaKnown RBP10.14□□□□□ -0.79
GARNL3-216ENST00000481242 IQSEC2Q5JU85 1478 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 E9PMD0 336 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 PDXKO00764 312 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 ZRANB2O95218 330 aaKnown RBP eCLIP10.14□□□□□ -0.79
GARNL3-216ENST00000481242 DPEP1P16444 411 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 SDC4P31431 198 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 SCARA5Q6ZMJ2 495 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 GBP7Q8N8V2 638 aaPredicted RBP10.14□□□□□ -0.79
GARNL3-216ENST00000481242 HDAC11Q96DB2 347 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 PDLIM2Q96JY6 352 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 DEFB129Q9H1M3 183 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 NRBP1Q9UHY1 535 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 SYNGAP1Q96PV0 1343 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 CCDC151A5D8V7 595 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 TTI1O43156 1089 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 GAS2O43903 313 aaKnown RBP10.14□□□□□ -0.79
GARNL3-216ENST00000481242 NMT2O60551 498 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 NR3C2P08235 984 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 KRT7P08729 469 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 MSH2P43246 934 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 KCNJ6P48051 423 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 HUNKP57058 714 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 ZBTB17Q13105 803 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 RAPH1Q70E73 1250 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 HAUS6Q7Z4H7 955 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 FAM213AQ9BRX8 229 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 KLC2Q9H0B6 622 aa10.14□□□□□ -0.79
GARNL3-216ENST00000481242 AGO2Q9UKV8 859 aaKnown RBP10.14□□□□□ -0.79
GARNL3-216ENST00000481242 CEP170BQ9Y4F5 1589 aaPredicted RBP10.14□□□□□ -0.79
GARNL3-216ENST00000481242 RRN3P2A6NIE6 340 aa10.13□□□□□ -0.79
GARNL3-216ENST00000481242 PSMD14O00487 310 aa10.13□□□□□ -0.79
GARNL3-216ENST00000481242 EVI5O60447 810 aa10.13□□□□□ -0.79
GARNL3-216ENST00000481242 EIF3BP55884 814 aaKnown RBP10.13□□□□□ -0.79
GARNL3-216ENST00000481242 STX1BP61266 288 aa10.13□□□□□ -0.79
GARNL3-216ENST00000481242 GPC5P78333 572 aa10.13□□□□□ -0.79
GARNL3-216ENST00000481242 ATP6V1E2Q96A05 226 aa10.13□□□□□ -0.79
GARNL3-216ENST00000481242 NUDT12Q9BQG2 462 aa10.13□□□□□ -0.79
GARNL3-216ENST00000481242 ADAMTS1Q9UHI8 967 aa10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms