RNA–Protein interactions for RNA: ENST00000481131.5

UPF3A-207, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 3

Gene UPF3A, Length 678 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-207ENST00000481131 KCMF1Q9P0J7 381 aa6.81□□□□□ -1.32
UPF3A-207ENST00000481131 MAGEL2Q9UJ55 1249 aa6.81□□□□□ -1.32
UPF3A-207ENST00000481131 PCDHB6Q9Y5E3 794 aa6.81□□□□□ -1.32
UPF3A-207ENST00000481131 KNG1P01042 644 aa6.8□□□□□ -1.32
UPF3A-207ENST00000481131 CYP2C19P33261 490 aa6.8□□□□□ -1.32
UPF3A-207ENST00000481131 ADCY8P40145 1251 aa6.8□□□□□ -1.32
UPF3A-207ENST00000481131 SLC5A3P53794 718 aa6.8□□□□□ -1.32
UPF3A-207ENST00000481131 ADKP55263 362 aaKnown RBP6.8□□□□□ -1.32
UPF3A-207ENST00000481131 DLG4P78352 724 aa6.8□□□□□ -1.32
UPF3A-207ENST00000481131 RRP12Q5JTH9 1297 aaKnown RBP6.8□□□□□ -1.32
UPF3A-207ENST00000481131 TMEM132EQ6IEE7 984 aa6.8□□□□□ -1.32
UPF3A-207ENST00000481131 BMP8AQ7Z5Y6 402 aa6.8□□□□□ -1.32
UPF3A-207ENST00000481131 TMEFF1Q8IYR6 380 aa6.8□□□□□ -1.32
UPF3A-207ENST00000481131 PPM1NQ8N819 430 aa6.8□□□□□ -1.32
UPF3A-207ENST00000481131 KYQ8NBH2 561 aa6.8□□□□□ -1.32
UPF3A-207ENST00000481131 GAB3Q8WWW8 586 aa6.8□□□□□ -1.32
UPF3A-207ENST00000481131 RSAD2Q8WXG1 361 aa6.8□□□□□ -1.32
UPF3A-207ENST00000481131 NOL10Q9BSC4 688 aaKnown RBP6.8□□□□□ -1.32
UPF3A-207ENST00000481131 SLC12A5Q9H2X9 1139 aa6.8□□□□□ -1.32
UPF3A-207ENST00000481131 PCDH18Q9HCL0 1135 aa6.8□□□□□ -1.32
UPF3A-207ENST00000481131 CROTQ9UKG9 612 aa6.8□□□□□ -1.32
UPF3A-207ENST00000481131 KIF3BO15066 747 aa6.79□□□□□ -1.32
UPF3A-207ENST00000481131 FXR1P51114 621 aaKnown RBP eCLIP6.79□□□□□ -1.32
UPF3A-207ENST00000481131 MLLT6P55198 1093 aaPredicted RBP6.79□□□□□ -1.32
UPF3A-207ENST00000481131 SPIDRQ14159 915 aa6.79□□□□□ -1.32
UPF3A-207ENST00000481131 PRR31Q5SQ13 230 aa6.79□□□□□ -1.32
UPF3A-207ENST00000481131 B3GNT9Q6UX72 402 aa6.79□□□□□ -1.32
UPF3A-207ENST00000481131 CXXC5Q7LFL8 322 aaKnown RBP6.79□□□□□ -1.32
UPF3A-207ENST00000481131 CDYL2Q8N8U2 506 aa6.79□□□□□ -1.32
UPF3A-207ENST00000481131 ZBTB8AQ96BR9 441 aa6.79□□□□□ -1.32
UPF3A-207ENST00000481131 CLIP3Q96DZ5 547 aa6.79□□□□□ -1.32
UPF3A-207ENST00000481131 LRGUKQ96M69 825 aa6.79□□□□□ -1.32
UPF3A-207ENST00000481131 AIFM3Q96NN9 605 aa6.79□□□□□ -1.32
UPF3A-207ENST00000481131 EPB41L4AQ9HCS5 686 aaPredicted RBP6.79□□□□□ -1.32
UPF3A-207ENST00000481131 EIF4G1Q04637 1599 aaKnown RBP6.78□□□□□ -1.32
UPF3A-207ENST00000481131 CCDC194A0A1B0GVG4 234 aa6.78□□□□□ -1.32
UPF3A-207ENST00000481131 VSTM5A8MXK1 200 aa6.78□□□□□ -1.32
UPF3A-207ENST00000481131 CUTAO60888 179 aa6.78□□□□□ -1.32
UPF3A-207ENST00000481131 SEC24DO94855 1032 aaPredicted RBP6.78□□□□□ -1.32
UPF3A-207ENST00000481131 KIF23Q02241 960 aaPredicted RBP6.78□□□□□ -1.32
UPF3A-207ENST00000481131 GTF2H3Q13889 308 aa6.78□□□□□ -1.32
UPF3A-207ENST00000481131 ADRM1Q16186 407 aa6.78□□□□□ -1.32
UPF3A-207ENST00000481131 ANO4Q32M45 955 aa6.78□□□□□ -1.32
UPF3A-207ENST00000481131 GFOD2Q3B7J2 385 aa6.78□□□□□ -1.32
UPF3A-207ENST00000481131 WDR72Q3MJ13 1102 aa6.78□□□□□ -1.32
UPF3A-207ENST00000481131 TMEM200BQ69YZ2 307 aa6.78□□□□□ -1.32
UPF3A-207ENST00000481131 DPP8Q6V1X1 898 aaPredicted RBP6.78□□□□□ -1.32
UPF3A-207ENST00000481131 CATIPQ7Z7H3 387 aa6.78□□□□□ -1.32
UPF3A-207ENST00000481131 TTLL6Q8N841 843 aa6.78□□□□□ -1.32
UPF3A-207ENST00000481131 FBXO15Q8NCQ5 510 aaPredicted RBP6.78□□□□□ -1.32
UPF3A-207ENST00000481131 WDR48Q8TAF3 677 aa6.78□□□□□ -1.32
UPF3A-207ENST00000481131 ZCCHC14Q8WYQ9 949 aaKnown RBP6.78□□□□□ -1.32
UPF3A-207ENST00000481131 COA7Q96BR5 231 aa6.78□□□□□ -1.32
UPF3A-207ENST00000481131 ACE2Q9BYF1 805 aaPredicted RBP6.78□□□□□ -1.32
UPF3A-207ENST00000481131 SPATA6Q9NWH7 488 aaPredicted RBP6.78□□□□□ -1.32
UPF3A-207ENST00000481131 OBP2AQ9NY56 170 aa6.78□□□□□ -1.32
UPF3A-207ENST00000481131 GOLGA6CA6NDK9 693 aa6.77□□□□□ -1.33
UPF3A-207ENST00000481131 GOLGA6BA6NDN3 693 aa6.77□□□□□ -1.33
UPF3A-207ENST00000481131 MAP4K4O95819 1239 aaPredicted RBP6.77□□□□□ -1.33
UPF3A-207ENST00000481131 GOLGA6DP0CG33 693 aa6.77□□□□□ -1.33
UPF3A-207ENST00000481131 VCAM1P19320 739 aa6.77□□□□□ -1.33
UPF3A-207ENST00000481131 EDNRBP24530 442 aa6.77□□□□□ -1.33
UPF3A-207ENST00000481131 GPR15P49685 360 aa6.77□□□□□ -1.33
UPF3A-207ENST00000481131 DLX2Q07687 328 aaPredicted RBP6.77□□□□□ -1.33
UPF3A-207ENST00000481131 ZNF267Q14586 743 aaPredicted RBP6.77□□□□□ -1.33
UPF3A-207ENST00000481131 DGKDQ16760 1214 aa6.77□□□□□ -1.33
UPF3A-207ENST00000481131 GRAMD4Q6IC98 578 aa6.77□□□□□ -1.33
UPF3A-207ENST00000481131 CCDC146Q8IYE0 955 aa6.77□□□□□ -1.33
UPF3A-207ENST00000481131 THEMISQ8N1K5 641 aaPredicted RBP6.77□□□□□ -1.33
UPF3A-207ENST00000481131 RUNDC1Q96C34 613 aa6.77□□□□□ -1.33
UPF3A-207ENST00000481131 CCDC136Q96JN2 1154 aa6.77□□□□□ -1.33
UPF3A-207ENST00000481131 HIST1H2AHQ96KK5 128 aa6.77□□□□□ -1.33
UPF3A-207ENST00000481131 WRNIP1Q96S55 665 aa6.77□□□□□ -1.33
UPF3A-207ENST00000481131 HIST1H2AJQ99878 128 aa6.77□□□□□ -1.33
UPF3A-207ENST00000481131 GTPBP4Q9BZE4 634 aaKnown RBP6.77□□□□□ -1.33
UPF3A-207ENST00000481131 CSRNP2Q9H175 543 aa6.77□□□□□ -1.33
UPF3A-207ENST00000481131 GOLGA6AQ9NYA3 693 aa6.77□□□□□ -1.33
UPF3A-207ENST00000481131 SCOCQ9UIL1 159 aa6.77□□□□□ -1.33
UPF3A-207ENST00000481131 CC2D2AQ9P2K1 1620 aa6.76□□□□□ -1.33
UPF3A-207ENST00000481131 ETV2O00321 342 aaPredicted RBP6.76□□□□□ -1.33
UPF3A-207ENST00000481131 FARP2O94887 1054 aaPredicted RBP6.76□□□□□ -1.33
UPF3A-207ENST00000481131 KRT1P04264 644 aa6.76□□□□□ -1.33
UPF3A-207ENST00000481131 CHGBP05060 677 aa6.76□□□□□ -1.33
UPF3A-207ENST00000481131 POU2F2P09086 479 aa6.76□□□□□ -1.33
UPF3A-207ENST00000481131 U2AF1L5P0DN76 240 aaPredicted RBP6.76□□□□□ -1.33
UPF3A-207ENST00000481131 AKAP5P24588 427 aa6.76□□□□□ -1.33
UPF3A-207ENST00000481131 U2AF1Q01081 240 aaKnown RBP eCLIP6.76□□□□□ -1.33
UPF3A-207ENST00000481131 MALLQ13021 153 aa6.76□□□□□ -1.33
UPF3A-207ENST00000481131 MINDY4Q4G0A6 757 aa6.76□□□□□ -1.33
UPF3A-207ENST00000481131 CCDC178Q5BJE1 867 aa6.76□□□□□ -1.33
UPF3A-207ENST00000481131 IFIT1BQ5T764 474 aaKnown RBP6.76□□□□□ -1.33
UPF3A-207ENST00000481131 LCE4AQ5TA78 99 aa6.76□□□□□ -1.33
UPF3A-207ENST00000481131 LILRA6Q6PI73 481 aa6.76□□□□□ -1.33
UPF3A-207ENST00000481131 MIER2Q8N344 545 aa6.76□□□□□ -1.33
UPF3A-207ENST00000481131 PPP1R14CQ8TAE6 165 aa6.76□□□□□ -1.33
UPF3A-207ENST00000481131 FNIP1Q8TF40 1166 aa6.76□□□□□ -1.33
UPF3A-207ENST00000481131 DYDC2Q96IM9 177 aa6.76□□□□□ -1.33
UPF3A-207ENST00000481131 TAAR9Q96RI9 348 aa6.76□□□□□ -1.33
UPF3A-207ENST00000481131 DMRT3Q9NQL9 472 aa6.76□□□□□ -1.33
UPF3A-207ENST00000481131 POLR3BQ9NW08 1133 aaPredicted RBP6.76□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms