RNA–Protein interactions for RNA: ENST00000480744.2

LIMS3-203, Transcript of LIM zinc finger domain containing 3, humanhuman

APPRIS P1 TSL 5 BASIC

Gene LIMS3, Length 1,197 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS3-203ENST00000480744 RBM10P98175 930 aaKnown RBP17.1■□□□□ 0.33
LIMS3-203ENST00000480744 CDC42EP1Q00587 391 aa17.1■□□□□ 0.33
LIMS3-203ENST00000480744 CLLU1OSQ5K130 101 aa17.1■□□□□ 0.33
LIMS3-203ENST00000480744 ANO5Q75V66 913 aa17.1■□□□□ 0.33
LIMS3-203ENST00000480744 MRPS27Q92552 414 aaKnown RBP17.1■□□□□ 0.33
LIMS3-203ENST00000480744 NLRP4Q96MN2 994 aa17.1■□□□□ 0.33
LIMS3-203ENST00000480744 CEP89Q96ST8 783 aa17.1■□□□□ 0.33
LIMS3-203ENST00000480744 ORC3Q9UBD5 711 aaPredicted RBP17.1■□□□□ 0.33
LIMS3-203ENST00000480744 VAV3Q9UKW4 847 aa17.1■□□□□ 0.33
LIMS3-203ENST00000480744 IGKV6-21A0A0C4DH24 114 aa17.09■□□□□ 0.33
LIMS3-203ENST00000480744 A0A0U1RQF3 1178 aa17.09■□□□□ 0.33
LIMS3-203ENST00000480744 PRR33A8MZF0 331 aa17.09■□□□□ 0.33
LIMS3-203ENST00000480744 FSCN2O14926 492 aa17.09■□□□□ 0.33
LIMS3-203ENST00000480744 MAFO75444 373 aaPredicted RBP17.09■□□□□ 0.33
LIMS3-203ENST00000480744 GCFC2P16383 781 aaKnown RBP17.09■□□□□ 0.33
LIMS3-203ENST00000480744 PPM1AP35813 382 aa17.09■□□□□ 0.33
LIMS3-203ENST00000480744 QARSP47897 775 aaKnown RBP17.09■□□□□ 0.33
LIMS3-203ENST00000480744 COASYQ13057 564 aa17.09■□□□□ 0.33
LIMS3-203ENST00000480744 PPP2R5CQ13362 524 aa17.09■□□□□ 0.33
LIMS3-203ENST00000480744 ANKRD1Q15327 319 aa17.09■□□□□ 0.33
LIMS3-203ENST00000480744 DUSP6Q16828 381 aa17.09■□□□□ 0.33
LIMS3-203ENST00000480744 LONRF3Q496Y0 759 aa17.09■□□□□ 0.33
LIMS3-203ENST00000480744 TWF2Q6IBS0 349 aaKnown RBP17.09■□□□□ 0.33
LIMS3-203ENST00000480744 PDE12Q6L8Q7 609 aaKnown RBP17.09■□□□□ 0.33
LIMS3-203ENST00000480744 KSR1Q8IVT5 923 aa17.09■□□□□ 0.33
LIMS3-203ENST00000480744 NECAB1Q8N987 351 aa17.09■□□□□ 0.33
LIMS3-203ENST00000480744 SMRP1Q8NCR6 262 aa17.09■□□□□ 0.33
LIMS3-203ENST00000480744 WASF1Q92558 559 aa17.09■□□□□ 0.33
LIMS3-203ENST00000480744 FAM20AQ96MK3 541 aa17.09■□□□□ 0.33
LIMS3-203ENST00000480744 TCF25Q9BQ70 676 aa17.09■□□□□ 0.33
LIMS3-203ENST00000480744 JPH2Q9BR39 696 aaPredicted RBP17.09■□□□□ 0.33
LIMS3-203ENST00000480744 KCNMB3Q9NPA1 279 aa17.09■□□□□ 0.33
LIMS3-203ENST00000480744 CYP26B1Q9NR63 512 aa17.09■□□□□ 0.33
LIMS3-203ENST00000480744 BMP2KQ9NSY1 1161 aaPredicted RBP17.09■□□□□ 0.33
LIMS3-203ENST00000480744 SPG21Q9NZD8 308 aa17.09■□□□□ 0.33
LIMS3-203ENST00000480744 PIN4Q9Y237 131 aaKnown RBP17.09■□□□□ 0.33
LIMS3-203ENST00000480744 LZTS1Q9Y250 596 aa17.09■□□□□ 0.33
LIMS3-203ENST00000480744 DKC1O60832 514 aaKnown RBP eCLIP17.08■□□□□ 0.32
LIMS3-203ENST00000480744 CTDNEP1O95476 244 aa17.08■□□□□ 0.32
LIMS3-203ENST00000480744 EYA4O95677 639 aa17.08■□□□□ 0.32
LIMS3-203ENST00000480744 EOMESO95936 686 aa17.08■□□□□ 0.32
LIMS3-203ENST00000480744 ATF7P17544 494 aaPredicted RBP17.08■□□□□ 0.32
LIMS3-203ENST00000480744 NPEPPSP55786 919 aa17.08■□□□□ 0.32
LIMS3-203ENST00000480744 ANAPC15P60006 121 aa17.08■□□□□ 0.32
LIMS3-203ENST00000480744 PLCB3Q01970 1234 aa17.08■□□□□ 0.32
LIMS3-203ENST00000480744 KRT17Q04695 432 aa17.08■□□□□ 0.32
LIMS3-203ENST00000480744 NCAPH2Q6IBW4 605 aa17.08■□□□□ 0.32
LIMS3-203ENST00000480744 PPP4R3AQ6IN85 833 aa17.08■□□□□ 0.32
LIMS3-203ENST00000480744 CATSPER4Q7RTX7 472 aa17.08■□□□□ 0.32
LIMS3-203ENST00000480744 ZNF598Q86UK7 904 aaKnown RBP17.08■□□□□ 0.32
LIMS3-203ENST00000480744 ZNF410Q86VK4 478 aa17.08■□□□□ 0.32
LIMS3-203ENST00000480744 POTEDQ86YR6 584 aa17.08■□□□□ 0.32
LIMS3-203ENST00000480744 CEP170P1Q96L14 293 aa17.08■□□□□ 0.32
LIMS3-203ENST00000480744 CDCA3Q99618 268 aaPredicted RBP17.08■□□□□ 0.32
LIMS3-203ENST00000480744 NAP1L4Q99733 375 aaKnown RBP17.08■□□□□ 0.32
LIMS3-203ENST00000480744 MRPL9Q9BYD2 267 aaKnown RBP17.08■□□□□ 0.32
LIMS3-203ENST00000480744 INO80BQ9C086 356 aaPredicted RBP17.08■□□□□ 0.32
LIMS3-203ENST00000480744 CHST12Q9NRB3 414 aa17.08■□□□□ 0.32
LIMS3-203ENST00000480744 MUTYHQ9UIF7 546 aa17.08■□□□□ 0.32
LIMS3-203ENST00000480744 USP15Q9Y4E8 981 aaPredicted RBP17.08■□□□□ 0.32
LIMS3-203ENST00000480744 FSD2A1L4K1 749 aa17.07■□□□□ 0.32
LIMS3-203ENST00000480744 FAM205CA6NFA0 338 aa17.07■□□□□ 0.32
LIMS3-203ENST00000480744 P4HBP07237 508 aaKnown RBP17.07■□□□□ 0.32
LIMS3-203ENST00000480744 SRGAP2BP0DMP2 458 aa17.07■□□□□ 0.32
LIMS3-203ENST00000480744 CA8P35219 290 aa17.07■□□□□ 0.32
LIMS3-203ENST00000480744 KRT2P35908 639 aa17.07■□□□□ 0.32
LIMS3-203ENST00000480744 PHKA2P46019 1235 aa17.07■□□□□ 0.32
LIMS3-203ENST00000480744 FOSBP53539 338 aa17.07■□□□□ 0.32
LIMS3-203ENST00000480744 POLGP54098 1239 aaPredicted RBP17.07■□□□□ 0.32
LIMS3-203ENST00000480744 EARS2Q5JPH6 523 aaKnown RBP17.07■□□□□ 0.32
LIMS3-203ENST00000480744 LLGL2Q6P1M3 1020 aa17.07■□□□□ 0.32
LIMS3-203ENST00000480744 TMC7Q7Z402 723 aa17.07■□□□□ 0.32
LIMS3-203ENST00000480744 RNF135Q8IUD6 432 aa17.07■□□□□ 0.32
LIMS3-203ENST00000480744 ZNF579Q8NAF0 562 aaKnown RBP17.07■□□□□ 0.32
LIMS3-203ENST00000480744 VN1R2Q8NFZ6 395 aa17.07■□□□□ 0.32
LIMS3-203ENST00000480744 SLC7A3Q8WY07 619 aa17.07■□□□□ 0.32
LIMS3-203ENST00000480744 HAS1Q92839 578 aa17.07■□□□□ 0.32
LIMS3-203ENST00000480744 LPPQ93052 612 aa17.07■□□□□ 0.32
LIMS3-203ENST00000480744 LXNQ9BS40 222 aa17.07■□□□□ 0.32
LIMS3-203ENST00000480744 BRMS1Q9HCU9 246 aa17.07■□□□□ 0.32
LIMS3-203ENST00000480744 COL4A3BPQ9Y5P4 624 aa17.07■□□□□ 0.32
LIMS3-203ENST00000480744 HIDE1A8MVS5 230 aa17.06■□□□□ 0.32
LIMS3-203ENST00000480744 NT5C1B-RDH14C9J2C7 533 aa17.06■□□□□ 0.32
LIMS3-203ENST00000480744 TBX3O15119 743 aa17.06■□□□□ 0.32
LIMS3-203ENST00000480744 BAG4O95429 457 aaKnown RBP17.06■□□□□ 0.32
LIMS3-203ENST00000480744 LARGE1O95461 756 aa17.06■□□□□ 0.32
LIMS3-203ENST00000480744 NR5A1Q13285 461 aa17.06■□□□□ 0.32
LIMS3-203ENST00000480744 SLC39A11Q8N1S5 342 aa17.06■□□□□ 0.32
LIMS3-203ENST00000480744 TMEM143Q96AN5 459 aa17.06■□□□□ 0.32
LIMS3-203ENST00000480744 APOL5Q9BWW9 433 aa17.06■□□□□ 0.32
LIMS3-203ENST00000480744 NGRNQ9NPE2 291 aaKnown RBP17.06■□□□□ 0.32
LIMS3-203ENST00000480744 RGL1Q9NZL6 768 aa17.06■□□□□ 0.32
LIMS3-203ENST00000480744 WRAP73Q9P2S5 460 aaPredicted RBP17.06■□□□□ 0.32
LIMS3-203ENST00000480744 INPP5FQ9Y2H2 1132 aa17.06■□□□□ 0.32
LIMS3-203ENST00000480744 ZC3H11AO75152 810 aaKnown RBP eCLIP17.05■□□□□ 0.32
LIMS3-203ENST00000480744 SRGAP2CP0DJJ0 459 aa17.05■□□□□ 0.32
LIMS3-203ENST00000480744 SKIP12755 728 aa17.05■□□□□ 0.32
LIMS3-203ENST00000480744 TECP42680 631 aa17.05■□□□□ 0.32
LIMS3-203ENST00000480744 ALDH7A1P49419 539 aaKnown RBP17.05■□□□□ 0.32
LIMS3-203ENST00000480744 BCAR1P56945 870 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms