RNA–Protein interactions for RNA: ENST00000480562.3

ABCF3-214, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 1 (best)

Gene ABCF3, Length 1,182 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-214ENST00000480562 PLA2G4FQ68DD2 849 aa21.15■□□□□ 0.98
ABCF3-214ENST00000480562 ANO5Q75V66 913 aa21.15■□□□□ 0.98
ABCF3-214ENST00000480562 KSR1Q8IVT5 923 aa21.15■□□□□ 0.98
ABCF3-214ENST00000480562 FAM177A1Q8N128 213 aaPredicted RBP21.15■□□□□ 0.98
ABCF3-214ENST00000480562 CDCA3Q99618 268 aaPredicted RBP21.15■□□□□ 0.98
ABCF3-214ENST00000480562 PHF20Q9BVI0 1012 aa21.15■□□□□ 0.98
ABCF3-214ENST00000480562 SLKQ9H2G2 1235 aaPredicted RBP21.15■□□□□ 0.98
ABCF3-214ENST00000480562 VAV3Q9UKW4 847 aa21.15■□□□□ 0.98
ABCF3-214ENST00000480562 TPCN1Q9ULQ1 816 aa21.15■□□□□ 0.98
ABCF3-214ENST00000480562 TRIOO75962 3097 aa21.14■□□□□ 0.98
ABCF3-214ENST00000480562 HIDE1A8MVS5 230 aa21.14■□□□□ 0.97
ABCF3-214ENST00000480562 CDKL5O76039 1030 aa21.14■□□□□ 0.97
ABCF3-214ENST00000480562 EOMESO95936 686 aa21.14■□□□□ 0.97
ABCF3-214ENST00000480562 PSMC5P62195 406 aa21.14■□□□□ 0.97
ABCF3-214ENST00000480562 CDC42EP1Q00587 391 aa21.14■□□□□ 0.97
ABCF3-214ENST00000480562 HERC4Q5GLZ8 1057 aaPredicted RBP21.14■□□□□ 0.97
ABCF3-214ENST00000480562 RHPN2Q8IUC4 686 aa21.14■□□□□ 0.97
ABCF3-214ENST00000480562 OXER1Q8TDS5 423 aa21.14■□□□□ 0.97
ABCF3-214ENST00000480562 KCNMB3Q9NPA1 279 aa21.14■□□□□ 0.97
ABCF3-214ENST00000480562 DACT1Q9NYF0 836 aa21.14■□□□□ 0.97
ABCF3-214ENST00000480562 SPG21Q9NZD8 308 aa21.14■□□□□ 0.97
ABCF3-214ENST00000480562 MUC6Q6W4X9 2439 aa21.13■□□□□ 0.97
ABCF3-214ENST00000480562 PPM1AP35813 382 aa21.13■□□□□ 0.97
ABCF3-214ENST00000480562 KRT17Q04695 432 aa21.13■□□□□ 0.97
ABCF3-214ENST00000480562 LONRF3Q496Y0 759 aa21.13■□□□□ 0.97
ABCF3-214ENST00000480562 LLGL2Q6P1M3 1020 aa21.13■□□□□ 0.97
ABCF3-214ENST00000480562 PIK3AP1Q6ZUJ8 805 aa21.13■□□□□ 0.97
ABCF3-214ENST00000480562 NEK8Q86SG6 692 aa21.13■□□□□ 0.97
ABCF3-214ENST00000480562 ZNF579Q8NAF0 562 aaKnown RBP21.13■□□□□ 0.97
ABCF3-214ENST00000480562 LPPQ93052 612 aa21.13■□□□□ 0.97
ABCF3-214ENST00000480562 NLRP4Q96MN2 994 aa21.13■□□□□ 0.97
ABCF3-214ENST00000480562 APOL5Q9BWW9 433 aa21.13■□□□□ 0.97
ABCF3-214ENST00000480562 NGRNQ9NPE2 291 aaKnown RBP21.13■□□□□ 0.97
ABCF3-214ENST00000480562 CHST12Q9NRB3 414 aa21.13■□□□□ 0.97
ABCF3-214ENST00000480562 STK36Q9NRP7 1315 aa21.12■□□□□ 0.97
ABCF3-214ENST00000480562 LOC730098B7Z3J9 87 aa21.12■□□□□ 0.97
ABCF3-214ENST00000480562 NT5C1B-RDH14C9J2C7 533 aa21.12■□□□□ 0.97
ABCF3-214ENST00000480562 PFKFB2O60825 505 aa21.12■□□□□ 0.97
ABCF3-214ENST00000480562 SFPQP23246 707 aaKnown RBP eCLIP21.12■□□□□ 0.97
ABCF3-214ENST00000480562 TECP42680 631 aa21.12■□□□□ 0.97
ABCF3-214ENST00000480562 PHKA2P46019 1235 aa21.12■□□□□ 0.97
ABCF3-214ENST00000480562 QARSP47897 775 aaKnown RBP21.12■□□□□ 0.97
ABCF3-214ENST00000480562 NPEPPSP55786 919 aa21.12■□□□□ 0.97
ABCF3-214ENST00000480562 PPP2R5CQ13362 524 aa21.12■□□□□ 0.97
ABCF3-214ENST00000480562 TWF2Q6IBS0 349 aaKnown RBP21.12■□□□□ 0.97
ABCF3-214ENST00000480562 HFE2Q6ZVN8 426 aa21.12■□□□□ 0.97
ABCF3-214ENST00000480562 TMC7Q7Z402 723 aa21.12■□□□□ 0.97
ABCF3-214ENST00000480562 ZNF410Q86VK4 478 aa21.12■□□□□ 0.97
ABCF3-214ENST00000480562 SLC39A11Q8N1S5 342 aa21.12■□□□□ 0.97
ABCF3-214ENST00000480562 RPGRIP1Q96KN7 1286 aa21.12■□□□□ 0.97
ABCF3-214ENST00000480562 FAM20AQ96MK3 541 aa21.12■□□□□ 0.97
ABCF3-214ENST00000480562 CYP26B1Q9NR63 512 aa21.12■□□□□ 0.97
ABCF3-214ENST00000480562 WRAP73Q9P2S5 460 aaPredicted RBP21.12■□□□□ 0.97
ABCF3-214ENST00000480562 PIN4Q9Y237 131 aaKnown RBP21.12■□□□□ 0.97
ABCF3-214ENST00000480562 FSD2A1L4K1 749 aa21.11■□□□□ 0.97
ABCF3-214ENST00000480562 CCNT1O60563 726 aaKnown RBP21.11■□□□□ 0.97
ABCF3-214ENST00000480562 CTDNEP1O95476 244 aa21.11■□□□□ 0.97
ABCF3-214ENST00000480562 KCNC3Q14003 757 aa21.11■□□□□ 0.97
ABCF3-214ENST00000480562 PPP4R3AQ6IN85 833 aa21.11■□□□□ 0.97
ABCF3-214ENST00000480562 ANKRD54Q6NXT1 300 aa21.11■□□□□ 0.97
ABCF3-214ENST00000480562 TMEM184AQ6ZMB5 413 aa21.11■□□□□ 0.97
ABCF3-214ENST00000480562 SUSD6Q92537 303 aa21.11■□□□□ 0.97
ABCF3-214ENST00000480562 PHF7Q9BWX1 381 aaPredicted RBP21.11■□□□□ 0.97
ABCF3-214ENST00000480562 MRPL9Q9BYD2 267 aaKnown RBP21.11■□□□□ 0.97
ABCF3-214ENST00000480562 MEIS3P2A8K0S8 358 aa21.1■□□□□ 0.97
ABCF3-214ENST00000480562 GCFC2P16383 781 aaKnown RBP21.1■□□□□ 0.97
ABCF3-214ENST00000480562 XBP1P17861 261 aa21.1■□□□□ 0.97
ABCF3-214ENST00000480562 HOXD11P31277 338 aaPredicted RBP21.1■□□□□ 0.97
ABCF3-214ENST00000480562 BCAR1P56945 870 aa21.1■□□□□ 0.97
ABCF3-214ENST00000480562 EARS2Q5JPH6 523 aaKnown RBP21.1■□□□□ 0.97
ABCF3-214ENST00000480562 SYCE2Q6PIF2 218 aa21.1■□□□□ 0.97
ABCF3-214ENST00000480562 CATSPER4Q7RTX7 472 aa21.1■□□□□ 0.97
ABCF3-214ENST00000480562 HAS1Q92839 578 aa21.1■□□□□ 0.97
ABCF3-214ENST00000480562 CEP170P1Q96L14 293 aa21.1■□□□□ 0.97
ABCF3-214ENST00000480562 JPH2Q9BR39 696 aaPredicted RBP21.1■□□□□ 0.97
ABCF3-214ENST00000480562 INO80BQ9C086 356 aaPredicted RBP21.1■□□□□ 0.97
ABCF3-214ENST00000480562 S1PR5Q9H228 398 aa21.1■□□□□ 0.97
ABCF3-214ENST00000480562 BMP2KQ9NSY1 1161 aaPredicted RBP21.1■□□□□ 0.97
ABCF3-214ENST00000480562 ORC3Q9UBD5 711 aaPredicted RBP21.1■□□□□ 0.97
ABCF3-214ENST00000480562 FAM205CA6NFA0 338 aa21.09■□□□□ 0.97
ABCF3-214ENST00000480562 MARCH6O60337 910 aa21.09■□□□□ 0.97
ABCF3-214ENST00000480562 P4HBP07237 508 aaKnown RBP21.09■□□□□ 0.97
ABCF3-214ENST00000480562 SRGAP2BP0DMP2 458 aa21.09■□□□□ 0.97
ABCF3-214ENST00000480562 ALDH7A1P49419 539 aaKnown RBP21.09■□□□□ 0.97
ABCF3-214ENST00000480562 AK2P54819 239 aa21.09■□□□□ 0.97
ABCF3-214ENST00000480562 SMC1AQ14683 1233 aaKnown RBP21.09■□□□□ 0.97
ABCF3-214ENST00000480562 CBX2Q14781 532 aaPredicted RBP21.09■□□□□ 0.97
ABCF3-214ENST00000480562 POTEDQ86YR6 584 aa21.09■□□□□ 0.97
ABCF3-214ENST00000480562 MRPL43Q8N983 215 aaKnown RBP21.09■□□□□ 0.97
ABCF3-214ENST00000480562 EDAQ92838 391 aa21.09■□□□□ 0.97
ABCF3-214ENST00000480562 TMEM143Q96AN5 459 aa21.09■□□□□ 0.97
ABCF3-214ENST00000480562 TRAIPQ9BWF2 469 aa21.09■□□□□ 0.97
ABCF3-214ENST00000480562 IFT122Q9HBG6 1241 aa21.09■□□□□ 0.97
ABCF3-214ENST00000480562 FAM105AQ9NUU6 356 aa21.09■□□□□ 0.97
ABCF3-214ENST00000480562 RGL1Q9NZL6 768 aa21.09■□□□□ 0.97
ABCF3-214ENST00000480562 INPP5FQ9Y2H2 1132 aa21.09■□□□□ 0.97
ABCF3-214ENST00000480562 COL4A3BPQ9Y5P4 624 aa21.09■□□□□ 0.97
ABCF3-214ENST00000480562 TECTAO75443 2155 aa21.09■□□□□ 0.97
ABCF3-214ENST00000480562 C2orf71A6NGG8 1288 aa21.08■□□□□ 0.97
ABCF3-214ENST00000480562 DKC1O60832 514 aaKnown RBP eCLIP21.08■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms