RNA–Protein interactions for RNA: ENST00000480067.1

CLDN11-205, Transcript of claudin 11, humanhuman

TSL 1 (best)

Gene CLDN11, Length 1,589 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN11-205ENST00000480067 RNF149Q8NC42 400 aa12.38□□□□□ -0.43
CLDN11-205ENST00000480067 ASAP3Q8TDY4 903 aa12.38□□□□□ -0.43
CLDN11-205ENST00000480067 PPP1R16BQ96T49 567 aa12.38□□□□□ -0.43
CLDN11-205ENST00000480067 CELF4Q9BZC1 486 aaKnown RBP12.38□□□□□ -0.43
CLDN11-205ENST00000480067 PVALEFA0A1B0GWK0 134 aa12.37□□□□□ -0.43
CLDN11-205ENST00000480067 LRRIQ4A6NIV6 560 aa12.37□□□□□ -0.43
CLDN11-205ENST00000480067 GPR32O75388 356 aa12.37□□□□□ -0.43
CLDN11-205ENST00000480067 SMC2O95347 1197 aa12.37□□□□□ -0.43
CLDN11-205ENST00000480067 SELPP16109 830 aa12.37□□□□□ -0.43
CLDN11-205ENST00000480067 GAP43P17677 238 aa12.37□□□□□ -0.43
CLDN11-205ENST00000480067 NAMPTP43490 491 aa12.37□□□□□ -0.43
CLDN11-205ENST00000480067 GPC3P51654 580 aa12.37□□□□□ -0.43
CLDN11-205ENST00000480067 ZNF131P52739 623 aa12.37□□□□□ -0.43
CLDN11-205ENST00000480067 CRYBB1P53674 252 aaPredicted RBP12.37□□□□□ -0.43
CLDN11-205ENST00000480067 PNOCQ13519 176 aa12.37□□□□□ -0.43
CLDN11-205ENST00000480067 ZNF410Q86VK4 478 aa12.37□□□□□ -0.43
CLDN11-205ENST00000480067 C7orf61Q8IZ16 206 aa12.37□□□□□ -0.43
CLDN11-205ENST00000480067 DEPTORQ8TB45 409 aa12.37□□□□□ -0.43
CLDN11-205ENST00000480067 CCDC47Q96A33 483 aaKnown RBP12.37□□□□□ -0.43
CLDN11-205ENST00000480067 ZNF668Q96K58 619 aaPredicted RBP12.37□□□□□ -0.43
CLDN11-205ENST00000480067 NOC4LQ9BVI4 516 aaKnown RBP12.37□□□□□ -0.43
CLDN11-205ENST00000480067 GCOM2Q9BZD3 368 aaPredicted RBP12.37□□□□□ -0.43
CLDN11-205ENST00000480067 PPP1R12CQ9BZL4 782 aa12.37□□□□□ -0.43
CLDN11-205ENST00000480067 TBX21Q9UL17 535 aa12.37□□□□□ -0.43
CLDN11-205ENST00000480067 CDY2AQ9Y6F7 541 aa12.37□□□□□ -0.43
CLDN11-205ENST00000480067 A0A087WZ62 844 aa12.36□□□□□ -0.43
CLDN11-205ENST00000480067 KIAA0355O15063 1070 aa12.36□□□□□ -0.43
CLDN11-205ENST00000480067 CHRNA1P02708 482 aa12.36□□□□□ -0.43
CLDN11-205ENST00000480067 RPN1P04843 607 aaKnown RBP12.36□□□□□ -0.43
CLDN11-205ENST00000480067 PRR29P0C7W0 189 aa12.36□□□□□ -0.43
CLDN11-205ENST00000480067 RAG1P15918 1043 aa12.36□□□□□ -0.43
CLDN11-205ENST00000480067 PHKA2P46019 1235 aa12.36□□□□□ -0.43
CLDN11-205ENST00000480067 NPTX2P47972 431 aa12.36□□□□□ -0.43
CLDN11-205ENST00000480067 POU5F1BQ06416 359 aa12.36□□□□□ -0.43
CLDN11-205ENST00000480067 RBL2Q08999 1139 aa12.36□□□□□ -0.43
CLDN11-205ENST00000480067 DPYDQ12882 1025 aa12.36□□□□□ -0.43
CLDN11-205ENST00000480067 CAPSQ13938 189 aa12.36□□□□□ -0.43
CLDN11-205ENST00000480067 SKOR2Q2VWA4 1001 aaPredicted RBP12.36□□□□□ -0.43
CLDN11-205ENST00000480067 FAM26DQ5JW98 314 aa12.36□□□□□ -0.43
CLDN11-205ENST00000480067 UNC13DQ70J99 1090 aa12.36□□□□□ -0.43
CLDN11-205ENST00000480067 LRRC8DQ7L1W4 858 aa12.36□□□□□ -0.43
CLDN11-205ENST00000480067 FAM178BQ8IXR5 827 aa12.36□□□□□ -0.43
CLDN11-205ENST00000480067 BSNDQ8WZ55 320 aa12.36□□□□□ -0.43
CLDN11-205ENST00000480067 SMARCE1Q969G3 411 aa12.36□□□□□ -0.43
CLDN11-205ENST00000480067 FDXACB1Q9BRP7 624 aaPredicted RBP12.36□□□□□ -0.43
CLDN11-205ENST00000480067 NTPCRQ9BSD7 190 aaKnown RBP12.36□□□□□ -0.43
CLDN11-205ENST00000480067 NUP62CLQ9H1M0 184 aa12.36□□□□□ -0.43
CLDN11-205ENST00000480067 ADAMTS10Q9H324 1103 aa12.36□□□□□ -0.43
CLDN11-205ENST00000480067 CLSTN2Q9H4D0 955 aa12.36□□□□□ -0.43
CLDN11-205ENST00000480067 MRPL44Q9H9J2 332 aaKnown RBP12.36□□□□□ -0.43
CLDN11-205ENST00000480067 KMT5AQ9NQR1 393 aa12.36□□□□□ -0.43
CLDN11-205ENST00000480067 SEL1LQ9UBV2 794 aa12.36□□□□□ -0.43
CLDN11-205ENST00000480067 TRPV2Q9Y5S1 764 aa12.36□□□□□ -0.43
CLDN11-205ENST00000480067 FRMD3A2A2Y4 597 aa12.35□□□□□ -0.43
CLDN11-205ENST00000480067 TRIM43BA6NCK2 446 aa12.35□□□□□ -0.43
CLDN11-205ENST00000480067 TRAK2O60296 914 aa12.35□□□□□ -0.43
CLDN11-205ENST00000480067 CAPN15O75808 1086 aa12.35□□□□□ -0.43
CLDN11-205ENST00000480067 TIMP1P01033 207 aa12.35□□□□□ -0.43
CLDN11-205ENST00000480067 EIF4BP23588 611 aaKnown RBP12.35□□□□□ -0.43
CLDN11-205ENST00000480067 CYP2C18P33260 490 aa12.35□□□□□ -0.43
CLDN11-205ENST00000480067 CCL23P55773 120 aa12.35□□□□□ -0.43
CLDN11-205ENST00000480067 ZBTB8OSQ8IWT0 167 aa12.35□□□□□ -0.43
CLDN11-205ENST00000480067 SPIRE2Q8WWL2 714 aa12.35□□□□□ -0.43
CLDN11-205ENST00000480067 ERCC4Q92889 916 aaPredicted RBP12.35□□□□□ -0.43
CLDN11-205ENST00000480067 TRIM43Q96BQ3 446 aaPredicted RBP12.35□□□□□ -0.43
CLDN11-205ENST00000480067 OSMRQ99650 979 aa12.35□□□□□ -0.43
CLDN11-205ENST00000480067 INO80BQ9C086 356 aaPredicted RBP12.35□□□□□ -0.43
CLDN11-205ENST00000480067 C2orf40Q9H1Z8 148 aa12.35□□□□□ -0.43
CLDN11-205ENST00000480067 CDHR5Q9HBB8 845 aa12.35□□□□□ -0.43
CLDN11-205ENST00000480067 IFT122Q9HBG6 1241 aa12.35□□□□□ -0.43
CLDN11-205ENST00000480067 EXOC1Q9NV70 894 aa12.35□□□□□ -0.43
CLDN11-205ENST00000480067 RMND1Q9NWS8 449 aa12.35□□□□□ -0.43
CLDN11-205ENST00000480067 PCDHA5Q9Y5H7 936 aa12.35□□□□□ -0.43
CLDN11-205ENST00000480067 H0YCG3 227 aa12.35□□□□□ -0.43
CLDN11-205ENST00000480067 INO80B-WBP1J3KQ70 363 aa12.35□□□□□ -0.43
CLDN11-205ENST00000480067 SLC16A4O15374 487 aa12.35□□□□□ -0.43
CLDN11-205ENST00000480067 PARNO95453 639 aaKnown RBP12.35□□□□□ -0.43
CLDN11-205ENST00000480067 IQCF3P0C7M6 154 aa12.35□□□□□ -0.43
CLDN11-205ENST00000480067 DARSP14868 501 aaKnown RBP12.35□□□□□ -0.43
CLDN11-205ENST00000480067 EFNA5P52803 228 aa12.35□□□□□ -0.43
CLDN11-205ENST00000480067 PTENP60484 403 aa12.35□□□□□ -0.43
CLDN11-205ENST00000480067 MGAT3Q09327 533 aa12.35□□□□□ -0.43
CLDN11-205ENST00000480067 COASYQ13057 564 aa12.35□□□□□ -0.43
CLDN11-205ENST00000480067 KLHL40Q2TBA0 621 aa12.35□□□□□ -0.43
CLDN11-205ENST00000480067 SFR1Q86XK3 245 aa12.35□□□□□ -0.43
CLDN11-205ENST00000480067 SLC17A8Q8NDX2 589 aa12.35□□□□□ -0.43
CLDN11-205ENST00000480067 SYAP1Q96A49 352 aaPredicted RBP12.35□□□□□ -0.43
CLDN11-205ENST00000480067 GSDMAQ96QA5 445 aa12.35□□□□□ -0.43
CLDN11-205ENST00000480067 KIFC3Q9BVG8 833 aa12.35□□□□□ -0.43
CLDN11-205ENST00000480067 NFKBIZQ9BYH8 718 aa12.35□□□□□ -0.43
CLDN11-205ENST00000480067 OLFML3Q9NRN5 406 aa12.35□□□□□ -0.43
CLDN11-205ENST00000480067 TBC1D7Q9P0N9 293 aa12.35□□□□□ -0.43
CLDN11-205ENST00000480067 NR2E3Q9Y5X4 410 aa12.35□□□□□ -0.43
CLDN11-205ENST00000480067 UMODL1Q5DID0 1318 aa12.34□□□□□ -0.43
CLDN11-205ENST00000480067 TRIP12Q14669 1992 aaPredicted RBP12.34□□□□□ -0.43
CLDN11-205ENST00000480067 LOXHD1Q8IVV2 1947 aa12.34□□□□□ -0.43
CLDN11-205ENST00000480067 K7ERI5 159 aa12.34□□□□□ -0.43
CLDN11-205ENST00000480067 KLRC4O43908 158 aa12.34□□□□□ -0.43
CLDN11-205ENST00000480067 CSDE1O75534 798 aaKnown RBP12.34□□□□□ -0.43
CLDN11-205ENST00000480067 MAPTP10636 758 aaKnown RBP12.34□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms