RNA–Protein interactions for RNA: ENST00000479361.1

PERM1-203, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

TSL 1 (best)

Gene PERM1, Length 1,208 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-203ENST00000479361 PHKA2P46019 1235 aa27.72■■■□□ 2.03
PERM1-203ENST00000479361 KCNJ6P48051 423 aa27.72■■■□□ 2.03
PERM1-203ENST00000479361 NFX1Q12986 1120 aaKnown RBP27.72■■■□□ 2.03
PERM1-203ENST00000479361 RESP18Q5W5W9 173 aa27.72■■■□□ 2.03
PERM1-203ENST00000479361 ADALQ6DHV7 355 aa27.72■■■□□ 2.03
PERM1-203ENST00000479361 ASAP3Q8TDY4 903 aa27.72■■■□□ 2.03
PERM1-203ENST00000479361 DRC1Q96MC2 740 aa27.72■■■□□ 2.03
PERM1-203ENST00000479361 ERVK-5Q9HDB9 667 aa27.72■■■□□ 2.03
PERM1-203ENST00000479361 SLC4A7Q9Y6M7 1214 aa27.72■■■□□ 2.03
PERM1-203ENST00000479361 SFPQP23246 707 aaKnown RBP eCLIP27.71■■■□□ 2.03
PERM1-203ENST00000479361 MCM6Q14566 821 aa27.71■■■□□ 2.03
PERM1-203ENST00000479361 PPP2R5AQ15172 486 aa27.71■■■□□ 2.03
PERM1-203ENST00000479361 SRGAP1Q7Z6B7 1085 aa27.71■■■□□ 2.03
PERM1-203ENST00000479361 FAM228AQ86W67 206 aa27.71■■■□□ 2.03
PERM1-203ENST00000479361 IFT74Q96LB3 600 aa27.71■■■□□ 2.03
PERM1-203ENST00000479361 PANK2Q9BZ23 570 aa27.71■■■□□ 2.03
PERM1-203ENST00000479361 IFT122Q9HBG6 1241 aa27.71■■■□□ 2.03
PERM1-203ENST00000479361 CXXC1Q9P0U4 656 aaPredicted RBP27.71■■■□□ 2.03
PERM1-203ENST00000479361 ST3GAL5Q9UNP4 418 aa27.71■■■□□ 2.03
PERM1-203ENST00000479361 CAPSQ13938 189 aa27.7■■■□□ 2.02
PERM1-203ENST00000479361 DHX8Q14562 1220 aaKnown RBP27.7■■■□□ 2.02
PERM1-203ENST00000479361 TCTN1Q2MV58 587 aa27.7■■■□□ 2.02
PERM1-203ENST00000479361 GPBP1Q86WP2 473 aa27.7■■■□□ 2.02
PERM1-203ENST00000479361 PDILTQ8N807 584 aa27.7■■■□□ 2.02
PERM1-203ENST00000479361 LRRC15Q8TF66 581 aa27.7■■■□□ 2.02
PERM1-203ENST00000479361 PYM1Q9BRP8 204 aaKnown RBP27.7■■■□□ 2.02
PERM1-203ENST00000479361 NFKBIZQ9BYH8 718 aa27.7■■■□□ 2.02
PERM1-203ENST00000479361 HIP1RO75146 1068 aa27.69■■■□□ 2.02
PERM1-203ENST00000479361 CMA1P23946 247 aa27.69■■■□□ 2.02
PERM1-203ENST00000479361 WDR5P61964 334 aaKnown RBP27.69■■■□□ 2.02
PERM1-203ENST00000479361 SV2BQ7L1I2 683 aa27.69■■■□□ 2.02
PERM1-203ENST00000479361 IQUBQ8NA54 791 aa27.69■■■□□ 2.02
PERM1-203ENST00000479361 CUEDC2Q9H467 287 aa27.69■■■□□ 2.02
PERM1-203ENST00000479361 C17orf75Q9HAS0 396 aa27.69■■■□□ 2.02
PERM1-203ENST00000479361 GDPD2Q9HCC8 539 aa27.69■■■□□ 2.02
PERM1-203ENST00000479361 A0A087X0B3 334 aa27.68■■■□□ 2.02
PERM1-203ENST00000479361 LRRIQ4A6NIV6 560 aa27.68■■■□□ 2.02
PERM1-203ENST00000479361 NAMPTP43490 491 aa27.68■■■□□ 2.02
PERM1-203ENST00000479361 PTENP60484 403 aa27.68■■■□□ 2.02
PERM1-203ENST00000479361 PCBP1Q15365 356 aaKnown RBP eCLIP27.68■■■□□ 2.02
PERM1-203ENST00000479361 LRIT3Q3SXY7 679 aa27.68■■■□□ 2.02
PERM1-203ENST00000479361 NAALADL2Q58DX5 795 aa27.68■■■□□ 2.02
PERM1-203ENST00000479361 IFNLR1Q8IU57 520 aaPredicted RBP27.68■■■□□ 2.02
PERM1-203ENST00000479361 PHOSPHO2Q8TCD6 241 aa27.68■■■□□ 2.02
PERM1-203ENST00000479361 SLC9A7Q96T83 725 aa27.68■■■□□ 2.02
PERM1-203ENST00000479361 KCNG1Q9UIX4 513 aa27.68■■■□□ 2.02
PERM1-203ENST00000479361 AMHP03971 560 aa27.67■■■□□ 2.02
PERM1-203ENST00000479361 KRT18P05783 430 aaKnown RBP27.67■■■□□ 2.02
PERM1-203ENST00000479361 ATP2A2P16615 1042 aaKnown RBP27.67■■■□□ 2.02
PERM1-203ENST00000479361 CSPP1Q1MSJ5 1256 aa27.67■■■□□ 2.02
PERM1-203ENST00000479361 ARSHQ5FYA8 562 aa27.67■■■□□ 2.02
PERM1-203ENST00000479361 C2orf40Q9H1Z8 148 aa27.67■■■□□ 2.02
PERM1-203ENST00000479361 KCNH3Q9ULD8 1083 aa27.67■■■□□ 2.02
PERM1-203ENST00000479361 ODF2LQ9ULJ1 636 aa27.67■■■□□ 2.02
PERM1-203ENST00000479361 DENND3A2RUS2 1198 aa27.66■■■□□ 2.02
PERM1-203ENST00000479361 CSDE1O75534 798 aaKnown RBP27.66■■■□□ 2.02
PERM1-203ENST00000479361 RAD51AP2Q09MP3 1159 aa27.66■■■□□ 2.02
PERM1-203ENST00000479361 DMP1Q13316 513 aaPredicted RBP27.66■■■□□ 2.02
PERM1-203ENST00000479361 CATSPER4Q7RTX7 472 aa27.66■■■□□ 2.02
PERM1-203ENST00000479361 ZBTB8OSQ8IWT0 167 aa27.66■■■□□ 2.02
PERM1-203ENST00000479361 DAW1Q8N136 415 aa27.66■■■□□ 2.02
PERM1-203ENST00000479361 DEPTORQ8TB45 409 aa27.66■■■□□ 2.02
PERM1-203ENST00000479361 DHX58Q96C10 678 aa27.66■■■□□ 2.02
PERM1-203ENST00000479361 TMX1Q9H3N1 280 aa27.66■■■□□ 2.02
PERM1-203ENST00000479361 TCHHQ07283 1943 aa27.66■■■□□ 2.02
PERM1-203ENST00000479361 HSFX4A0A1B0GTS1 333 aaPredicted RBP27.65■■■□□ 2.02
PERM1-203ENST00000479361 HSFX3A0A1B0GWH4 333 aaPredicted RBP27.65■■■□□ 2.02
PERM1-203ENST00000479361 A0A1W2PQ27 194 aa27.65■■■□□ 2.02
PERM1-203ENST00000479361 A0A1W2PQ64 194 aa27.65■■■□□ 2.02
PERM1-203ENST00000479361 A0A1W2PQD8 194 aa27.65■■■□□ 2.02
PERM1-203ENST00000479361 GOLGA6L4A6NEF3 574 aa27.65■■■□□ 2.02
PERM1-203ENST00000479361 POLR2DO15514 142 aaKnown RBP27.65■■■□□ 2.02
PERM1-203ENST00000479361 ZSCAN20P17040 1043 aaPredicted RBP27.65■■■□□ 2.02
PERM1-203ENST00000479361 FGFR4P22455 802 aa27.65■■■□□ 2.02
PERM1-203ENST00000479361 MAPK7Q13164 816 aa27.65■■■□□ 2.02
PERM1-203ENST00000479361 E2F4Q16254 413 aa27.65■■■□□ 2.02
PERM1-203ENST00000479361 HABP4Q5JVS0 413 aaKnown RBP27.65■■■□□ 2.02
PERM1-203ENST00000479361 BSNDQ8WZ55 320 aa27.65■■■□□ 2.02
PERM1-203ENST00000479361 TSPYL2Q9H2G4 693 aaPredicted RBP27.65■■■□□ 2.02
PERM1-203ENST00000479361 POLD4Q9HCU8 107 aa27.65■■■□□ 2.02
PERM1-203ENST00000479361 INO80B-WBP1J3KQ70 363 aa27.64■■■□□ 2.02
PERM1-203ENST00000479361 ENPP3O14638 875 aa27.64■■■□□ 2.02
PERM1-203ENST00000479361 ERLIN2O94905 339 aa27.64■■■□□ 2.02
PERM1-203ENST00000479361 NCBP1Q09161 790 aaKnown RBP27.64■■■□□ 2.02
PERM1-203ENST00000479361 CDCA2Q69YH5 1023 aaPredicted RBP27.64■■■□□ 2.02
PERM1-203ENST00000479361 LIN28BQ6ZN17 250 aaKnown RBP eCLIP27.64■■■□□ 2.02
PERM1-203ENST00000479361 ADAM2Q99965 735 aa27.64■■■□□ 2.02
PERM1-203ENST00000479361 REEP2Q9BRK0 252 aa27.64■■■□□ 2.02
PERM1-203ENST00000479361 LRRC27Q9C0I9 530 aa27.64■■■□□ 2.02
PERM1-203ENST00000479361 MINDY3Q9H8M7 445 aa27.64■■■□□ 2.02
PERM1-203ENST00000479361 MAGEF1Q9HAY2 307 aa27.64■■■□□ 2.02
PERM1-203ENST00000479361 CHST12Q9NRB3 414 aa27.64■■■□□ 2.02
PERM1-203ENST00000479361 C1orf112Q9NSG2 853 aa27.64■■■□□ 2.02
PERM1-203ENST00000479361 LARSQ9P2J5 1176 aaKnown RBP27.64■■■□□ 2.02
PERM1-203ENST00000479361 TRIOBPQ9H2D6 2365 aa27.63■■■□□ 2.01
PERM1-203ENST00000479361 NPHP3-ACAD11A0A0J9YXS1 232 aa27.63■■■□□ 2.01
PERM1-203ENST00000479361 LOC101059915A0A1B0GWI6 518 aaPredicted RBP27.63■■■□□ 2.01
PERM1-203ENST00000479361 TBCAO75347 108 aaKnown RBP27.63■■■□□ 2.01
PERM1-203ENST00000479361 PLS3P13797 630 aa27.63■■■□□ 2.01
PERM1-203ENST00000479361 PFKFB1P16118 471 aa27.63■■■□□ 2.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms