RNA–Protein interactions for RNA: ENST00000479135.5

EWSR1-216, Transcript of EWS RNA binding protein 1, humanhuman

TSL 1 (best)

Gene EWSR1, Length 7,285 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EWSR1-216ENST00000479135 FUT11Q495W5 492 aa11.68□□□□□ -0.54
EWSR1-216ENST00000479135 SLC44A2Q8IWA5 706 aaPredicted RBP11.68□□□□□ -0.54
EWSR1-216ENST00000479135 LRRC71Q8N4P6 559 aa11.68□□□□□ -0.54
EWSR1-216ENST00000479135 GNAQP50148 359 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 SGO1Q5FBB7 561 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 KIAA0825Q8IV33 1275 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 SYNPOQ8N3V7 929 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 NT5C3AQ9H0P0 336 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 CNNM2Q9H8M5 875 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 WDR64B1ANS9 1081 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 TK2O00142 265 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 C4BPBP20851 252 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 IL12RB1P42701 662 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 YWHAZP63104 245 aaKnown RBP11.67□□□□□ -0.54
EWSR1-216ENST00000479135 KIZQ2M2Z5 673 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 PPP1R42Q7Z4L9 355 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 RTL9Q8NET4 1388 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 B4E1Z4 1266 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 MAPK4P31152 587 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 HMBOX1Q6NT76 420 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 SIX6OS1Q8N1H7 587 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 ROGDIQ9GZN7 287 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 ZNF624Q9P2J8 865 aaPredicted RBP11.67□□□□□ -0.54
EWSR1-216ENST00000479135 KCNJ14Q9UNX9 436 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 HPS5Q9UPZ3 1129 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 NFE2L3Q9Y4A8 694 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 TRIM17Q9Y577 477 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 ERBINQ96RT1 1412 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 IL10P22301 178 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 E4F1Q66K89 784 aaPredicted RBP11.67□□□□□ -0.54
EWSR1-216ENST00000479135 CABP7Q86V35 215 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 SMC5Q8IY18 1101 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 FAM172AQ8WUF8 416 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 IFT43Q96FT9 208 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 ANKRD36BP1Q96IX9 119 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 CDK19Q9BWU1 502 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 FANCEQ9HB96 536 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 C1orf112Q9NSG2 853 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 UGGT2Q9NYU1 1516 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 MCMDC2Q4G0Z9 681 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 HES6Q96HZ4 224 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 EHD3Q9NZN3 535 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 CTNNAL1Q9UBT7 734 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 FAM32AQ9Y421 112 aaKnown RBP11.67□□□□□ -0.54
EWSR1-216ENST00000479135 CLCN6P51797 869 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 KIAA1841Q6NSI8 718 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 PARP9Q8IXQ6 854 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 PYROXD1Q8WU10 500 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 IL17RAQ96F46 866 aa11.67□□□□□ -0.54
EWSR1-216ENST00000479135 PA2G4Q9UQ80 394 aaKnown RBP11.66□□□□□ -0.54
EWSR1-216ENST00000479135 PCDHGA4Q9Y5G9 962 aa11.66□□□□□ -0.54
EWSR1-216ENST00000479135 CFAP99D6REC4 459 aa11.66□□□□□ -0.54
EWSR1-216ENST00000479135 CD58P19256 250 aa11.66□□□□□ -0.54
EWSR1-216ENST00000479135 PLCD1P51178 756 aa11.66□□□□□ -0.54
EWSR1-216ENST00000479135 DSG1Q02413 1049 aa11.66□□□□□ -0.54
EWSR1-216ENST00000479135 RARS2Q5T160 578 aaKnown RBP11.66□□□□□ -0.54
EWSR1-216ENST00000479135 ABI1Q8IZP0 508 aa11.66□□□□□ -0.54
EWSR1-216ENST00000479135 SCG3Q8WXD2 468 aaKnown RBP11.66□□□□□ -0.54
EWSR1-216ENST00000479135 E2F7Q96AV8 911 aa11.66□□□□□ -0.54
EWSR1-216ENST00000479135 C10orf88Q9H8K7 445 aa11.66□□□□□ -0.54
EWSR1-216ENST00000479135 MLXIPQ9HAP2 919 aa11.66□□□□□ -0.54
EWSR1-216ENST00000479135 ZFATQ9P243 1243 aa11.66□□□□□ -0.54
EWSR1-216ENST00000479135 DAPK2Q9UIK4 370 aa11.66□□□□□ -0.54
EWSR1-216ENST00000479135 LRRIQ4A6NIV6 560 aa11.66□□□□□ -0.54
EWSR1-216ENST00000479135 POLR2BP30876 1174 aaKnown RBP11.66□□□□□ -0.54
EWSR1-216ENST00000479135 ICE2Q659A1 982 aa11.66□□□□□ -0.54
EWSR1-216ENST00000479135 TBC1D9BQ66K14 1250 aa11.66□□□□□ -0.54
EWSR1-216ENST00000479135 PLEKHA7Q6IQ23 1121 aa11.66□□□□□ -0.54
EWSR1-216ENST00000479135 MSANTD1Q6ZTZ1 278 aa11.66□□□□□ -0.54
EWSR1-216ENST00000479135 ANKS3Q6ZW76 656 aa11.66□□□□□ -0.54
EWSR1-216ENST00000479135 GPBP1Q86WP2 473 aa11.66□□□□□ -0.54
EWSR1-216ENST00000479135 SLC12A5Q9H2X9 1139 aa11.66□□□□□ -0.54
EWSR1-216ENST00000479135 SLC35C2Q9NQQ7 365 aa11.66□□□□□ -0.54
EWSR1-216ENST00000479135 ATG7O95352 703 aa11.66□□□□□ -0.54
EWSR1-216ENST00000479135 SERPINA3P01011 423 aa11.66□□□□□ -0.54
EWSR1-216ENST00000479135 ENO3P13929 434 aaPredicted RBP11.66□□□□□ -0.54
EWSR1-216ENST00000479135 ARL4DP49703 201 aa11.66□□□□□ -0.54
EWSR1-216ENST00000479135 COPS2P61201 443 aa11.66□□□□□ -0.54
EWSR1-216ENST00000479135 RNF219Q5W0B1 726 aaPredicted RBP11.66□□□□□ -0.54
EWSR1-216ENST00000479135 CHKBQ9Y259 395 aa11.66□□□□□ -0.54
EWSR1-216ENST00000479135 PRODHO43272 600 aa11.66□□□□□ -0.54
EWSR1-216ENST00000479135 GSSP48637 474 aa11.66□□□□□ -0.54
EWSR1-216ENST00000479135 TUBB2AQ13885 445 aa11.66□□□□□ -0.54
EWSR1-216ENST00000479135 HACE1Q8IYU2 909 aa11.66□□□□□ -0.54
EWSR1-216ENST00000479135 KRT78Q8N1N4 520 aa11.66□□□□□ -0.54
EWSR1-216ENST00000479135 PHC3Q8NDX5 983 aa11.66□□□□□ -0.54
EWSR1-216ENST00000479135 CATSPER1Q8NEC5 780 aa11.66□□□□□ -0.54
EWSR1-216ENST00000479135 TUBB2BQ9BVA1 445 aa11.66□□□□□ -0.54
EWSR1-216ENST00000479135 V9GY48 417 aaPredicted RBP11.66□□□□□ -0.54
EWSR1-216ENST00000479135 KCNJ18B7U540 433 aa11.65□□□□□ -0.54
EWSR1-216ENST00000479135 GADD45BO75293 160 aaPredicted RBP11.65□□□□□ -0.54
EWSR1-216ENST00000479135 SDSP20132 328 aa11.65□□□□□ -0.54
EWSR1-216ENST00000479135 KCNJ12Q14500 433 aa11.65□□□□□ -0.54
EWSR1-216ENST00000479135 R3HDM1Q15032 1099 aaKnown RBP11.65□□□□□ -0.54
EWSR1-216ENST00000479135 BZW1Q7L1Q6 419 aaKnown RBP11.65□□□□□ -0.54
EWSR1-216ENST00000479135 ANKRD2Q9GZV1 360 aa11.65□□□□□ -0.54
EWSR1-216ENST00000479135 SUPT6HQ7KZ85 1726 aaKnown RBP11.65□□□□□ -0.54
EWSR1-216ENST00000479135 CFAP65Q6ZU64 1925 aaKnown RBP11.65□□□□□ -0.54
EWSR1-216ENST00000479135 COPEO14579 308 aa11.65□□□□□ -0.54
EWSR1-216ENST00000479135 KRT37O76014 449 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms