RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 OR10A2Q9H208 303 aa6.21□□□□□ -1.42
SMNDC1-205ENST00000477763 PTPN22Q9Y2R2 807 aa6.21□□□□□ -1.42
SMNDC1-205ENST00000477763 GOLGA8AA7E2F4 631 aa6.2□□□□□ -1.42
SMNDC1-205ENST00000477763 GOLGA8BA8MQT2 603 aa6.2□□□□□ -1.42
SMNDC1-205ENST00000477763 ELL2O00472 640 aaPredicted RBP6.2□□□□□ -1.42
SMNDC1-205ENST00000477763 ARHGAP6O43182 974 aa6.2□□□□□ -1.42
SMNDC1-205ENST00000477763 OPHN1O60890 802 aa6.2□□□□□ -1.42
SMNDC1-205ENST00000477763 SYN1P17600 705 aa6.2□□□□□ -1.42
SMNDC1-205ENST00000477763 ODR4Q5SWX8 454 aa6.2□□□□□ -1.42
SMNDC1-205ENST00000477763 USP30Q70CQ3 517 aa6.2□□□□□ -1.42
SMNDC1-205ENST00000477763 CXorf67Q86X51 503 aaPredicted RBP6.2□□□□□ -1.42
SMNDC1-205ENST00000477763 GFM2Q969S9 779 aaKnown RBP6.2□□□□□ -1.42
SMNDC1-205ENST00000477763 SSBP3Q9BWW4 388 aaPredicted RBP6.2□□□□□ -1.42
SMNDC1-205ENST00000477763 ASPSCR1Q9BZE9 553 aa6.2□□□□□ -1.42
SMNDC1-205ENST00000477763 TRIM8Q9BZR9 551 aa6.2□□□□□ -1.42
SMNDC1-205ENST00000477763 KIAA1683Q9H0B3 1180 aa6.2□□□□□ -1.42
SMNDC1-205ENST00000477763 SEMA4AQ9H3S1 761 aa6.2□□□□□ -1.42
SMNDC1-205ENST00000477763 MTG2Q9H4K7 406 aa6.2□□□□□ -1.42
SMNDC1-205ENST00000477763 VTA1Q9NP79 307 aa6.2□□□□□ -1.42
SMNDC1-205ENST00000477763 POLR3BQ9NW08 1133 aaPredicted RBP6.2□□□□□ -1.42
SMNDC1-205ENST00000477763 PPP4R1LQ9P1A2 415 aa6.2□□□□□ -1.42
SMNDC1-205ENST00000477763 TRHDEQ9UKU6 1024 aa6.2□□□□□ -1.42
SMNDC1-205ENST00000477763 SYNPO2Q9UMS6 1093 aa6.2□□□□□ -1.42
SMNDC1-205ENST00000477763 ZNF536O15090 1300 aa6.2□□□□□ -1.42
SMNDC1-205ENST00000477763 WASHC2AQ641Q2 1341 aa6.2□□□□□ -1.42
SMNDC1-205ENST00000477763 ST20-MTHFSA0A0A6YYL1 179 aa6.19□□□□□ -1.42
SMNDC1-205ENST00000477763 PMS2P1A4D2B8 440 aa6.19□□□□□ -1.42
SMNDC1-205ENST00000477763 KDM1AO60341 852 aa6.19□□□□□ -1.42
SMNDC1-205ENST00000477763 H2AFYO75367 372 aaKnown RBP6.19□□□□□ -1.42
SMNDC1-205ENST00000477763 ALDH1L1O75891 902 aa6.19□□□□□ -1.42
SMNDC1-205ENST00000477763 APOL3O95236 402 aa6.19□□□□□ -1.42
SMNDC1-205ENST00000477763 STAT5BP51692 787 aa6.19□□□□□ -1.42
SMNDC1-205ENST00000477763 RRADP55042 308 aa6.19□□□□□ -1.42
SMNDC1-205ENST00000477763 ANTXR2P58335 489 aa6.19□□□□□ -1.42
SMNDC1-205ENST00000477763 KLF1Q13351 362 aaPredicted RBP6.19□□□□□ -1.42
SMNDC1-205ENST00000477763 GLB1LQ6UWU2 654 aa6.19□□□□□ -1.42
SMNDC1-205ENST00000477763 UNQ6494/PRO21346Q6UXR6 183 aa6.19□□□□□ -1.42
SMNDC1-205ENST00000477763 RSAD2Q8WXG1 361 aa6.19□□□□□ -1.42
SMNDC1-205ENST00000477763 NKD2Q969F2 451 aaPredicted RBP6.19□□□□□ -1.42
SMNDC1-205ENST00000477763 FERMT2Q96AC1 680 aa6.19□□□□□ -1.42
SMNDC1-205ENST00000477763 DYDC2Q96IM9 177 aa6.19□□□□□ -1.42
SMNDC1-205ENST00000477763 BDH2Q9BUT1 245 aa6.19□□□□□ -1.42
SMNDC1-205ENST00000477763 MEGF9Q9H1U4 602 aa6.19□□□□□ -1.42
SMNDC1-205ENST00000477763 JADE2Q9NQC1 790 aa6.19□□□□□ -1.42
SMNDC1-205ENST00000477763 TOPORSQ9NS56 1045 aaPredicted RBP6.19□□□□□ -1.42
SMNDC1-205ENST00000477763 C14orf119Q9NWQ9 140 aa6.19□□□□□ -1.42
SMNDC1-205ENST00000477763 CTDP1Q9Y5B0 961 aaPredicted RBP6.19□□□□□ -1.42
SMNDC1-205ENST00000477763 MYPNQ86TC9 1320 aa6.19□□□□□ -1.42
SMNDC1-205ENST00000477763 NPEPPSL1A6NEC2 478 aa6.18□□□□□ -1.42
SMNDC1-205ENST00000477763 CFBP00751 764 aa6.18□□□□□ -1.42
SMNDC1-205ENST00000477763 PFKMP08237 780 aa6.18□□□□□ -1.42
SMNDC1-205ENST00000477763 CELA3BP08861 270 aa6.18□□□□□ -1.42
SMNDC1-205ENST00000477763 GPR15P49685 360 aa6.18□□□□□ -1.42
SMNDC1-205ENST00000477763 MANFP55145 182 aaKnown RBP6.18□□□□□ -1.42
SMNDC1-205ENST00000477763 SCAND1P57086 179 aa6.18□□□□□ -1.42
SMNDC1-205ENST00000477763 RAC3P60763 192 aa6.18□□□□□ -1.42
SMNDC1-205ENST00000477763 RNF151Q2KHN1 245 aa6.18□□□□□ -1.42
SMNDC1-205ENST00000477763 CCDC178Q5BJE1 867 aa6.18□□□□□ -1.42
SMNDC1-205ENST00000477763 ZBTB41Q5SVQ8 909 aa6.18□□□□□ -1.42
SMNDC1-205ENST00000477763 NEIL1Q96FI4 390 aaPredicted RBP6.18□□□□□ -1.42
SMNDC1-205ENST00000477763 HIST1H2AHQ96KK5 128 aa6.18□□□□□ -1.42
SMNDC1-205ENST00000477763 WDR92Q96MX6 357 aa6.18□□□□□ -1.42
SMNDC1-205ENST00000477763 ACAP3Q96P50 834 aa6.18□□□□□ -1.42
SMNDC1-205ENST00000477763 LMF1Q96S06 567 aa6.18□□□□□ -1.42
SMNDC1-205ENST00000477763 SMAD5Q99717 465 aaKnown RBP6.18□□□□□ -1.42
SMNDC1-205ENST00000477763 HIST1H2AJQ99878 128 aa6.18□□□□□ -1.42
SMNDC1-205ENST00000477763 OSBPL6Q9BZF3 934 aa6.18□□□□□ -1.42
SMNDC1-205ENST00000477763 MS4A5Q9H3V2 200 aa6.18□□□□□ -1.42
SMNDC1-205ENST00000477763 NR2E1Q9Y466 385 aa6.18□□□□□ -1.42
SMNDC1-205ENST00000477763 NUMBLQ9Y6R0 609 aa6.18□□□□□ -1.42
SMNDC1-205ENST00000477763 SHTN1A0MZ66 631 aa6.17□□□□□ -1.42
SMNDC1-205ENST00000477763 GABRDO14764 452 aa6.17□□□□□ -1.42
SMNDC1-205ENST00000477763 CCND1P24385 295 aa6.17□□□□□ -1.42
SMNDC1-205ENST00000477763 EPHB1P54762 984 aa6.17□□□□□ -1.42
SMNDC1-205ENST00000477763 ERVK-21P61565 698 aa6.17□□□□□ -1.42
SMNDC1-205ENST00000477763 HGFACQ04756 655 aa6.17□□□□□ -1.42
SMNDC1-205ENST00000477763 PLP2Q04941 152 aa6.17□□□□□ -1.42
SMNDC1-205ENST00000477763 TTF1Q15361 905 aaPredicted RBP6.17□□□□□ -1.42
SMNDC1-205ENST00000477763 TBR1Q16650 682 aa6.17□□□□□ -1.42
SMNDC1-205ENST00000477763 MAN2A1Q16706 1144 aa6.17□□□□□ -1.42
SMNDC1-205ENST00000477763 TTC9BQ8N6N2 239 aa6.17□□□□□ -1.42
SMNDC1-205ENST00000477763 CDYL2Q8N8U2 506 aa6.17□□□□□ -1.42
SMNDC1-205ENST00000477763 JDP2Q8WYK2 163 aa6.17□□□□□ -1.42
SMNDC1-205ENST00000477763 SAMD11Q96NU1 681 aa6.17□□□□□ -1.42
SMNDC1-205ENST00000477763 NOL10Q9BSC4 688 aaKnown RBP6.17□□□□□ -1.42
SMNDC1-205ENST00000477763 TCEAL9Q9UHQ7 104 aa6.17□□□□□ -1.42
SMNDC1-205ENST00000477763 OAZ3Q9UMX2 235 aa6.17□□□□□ -1.42
SMNDC1-205ENST00000477763 G3BP2Q9UN86 482 aaKnown RBP6.17□□□□□ -1.42
SMNDC1-205ENST00000477763 PCDHB6Q9Y5E3 794 aa6.17□□□□□ -1.42
SMNDC1-205ENST00000477763 PRSS38A1L453 326 aa6.16□□□□□ -1.42
SMNDC1-205ENST00000477763 K7ESM1 405 aa6.16□□□□□ -1.42
SMNDC1-205ENST00000477763 MYBL2P10244 700 aa6.16□□□□□ -1.42
SMNDC1-205ENST00000477763 NEK2P51955 445 aa6.16□□□□□ -1.42
SMNDC1-205ENST00000477763 PGM2L1Q6PCE3 622 aa6.16□□□□□ -1.42
SMNDC1-205ENST00000477763 CIR1Q86X95 450 aaPredicted RBP6.16□□□□□ -1.42
SMNDC1-205ENST00000477763 AMOTL1Q8IY63 956 aa6.16□□□□□ -1.42
SMNDC1-205ENST00000477763 PPP1R14CQ8TAE6 165 aa6.16□□□□□ -1.42
SMNDC1-205ENST00000477763 LMBR1Q8WVP7 490 aa6.16□□□□□ -1.42
SMNDC1-205ENST00000477763 CFHR4Q92496 578 aa6.16□□□□□ -1.42
SMNDC1-205ENST00000477763 CHMP4CQ96CF2 233 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms