RNA–Protein interactions for RNA: ENST00000477605.1

CCM2-209, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 2,050 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-209ENST00000477605 RBM5P52756 815 aaKnown RBP eCLIP19.63■□□□□ 0.73
CCM2-209ENST00000477605 CTTNQ14247 550 aaKnown RBP19.63■□□□□ 0.73
CCM2-209ENST00000477605 INTS2Q9H0H0 1204 aaKnown RBP19.63■□□□□ 0.73
CCM2-209ENST00000477605 AGPAT3Q9NRZ7 376 aa19.63■□□□□ 0.73
CCM2-209ENST00000477605 APEX2Q9UBZ4 518 aa19.63■□□□□ 0.73
CCM2-209ENST00000477605 MEFVO15553 781 aaPredicted RBP19.62■□□□□ 0.73
CCM2-209ENST00000477605 BUB1BO60566 1050 aaPredicted RBP19.62■□□□□ 0.73
CCM2-209ENST00000477605 GDF11O95390 407 aa19.62■□□□□ 0.73
CCM2-209ENST00000477605 FAM107AO95990 144 aa19.62■□□□□ 0.73
CCM2-209ENST00000477605 GUCY2CP25092 1073 aa19.62■□□□□ 0.73
CCM2-209ENST00000477605 EIF3BP55884 814 aaKnown RBP19.62■□□□□ 0.73
CCM2-209ENST00000477605 GUCY1A3Q02108 690 aa19.62■□□□□ 0.73
CCM2-209ENST00000477605 ZNF844Q08AG5 666 aa19.62■□□□□ 0.73
CCM2-209ENST00000477605 KIF22Q14807 665 aa19.62■□□□□ 0.73
CCM2-209ENST00000477605 NAA35Q5VZE5 725 aa19.62■□□□□ 0.73
CCM2-209ENST00000477605 FAM178BQ8IXR5 827 aa19.62■□□□□ 0.73
CCM2-209ENST00000477605 PIGOQ8TEQ8 1089 aa19.62■□□□□ 0.73
CCM2-209ENST00000477605 WDR18Q9BV38 432 aa19.62■□□□□ 0.73
CCM2-209ENST00000477605 ADAMTSL1Q8N6G6 1762 aa19.61■□□□□ 0.73
CCM2-209ENST00000477605 ANKRD62A6NC57 917 aa19.61■□□□□ 0.73
CCM2-209ENST00000477605 FAM187AA6NFU0 413 aa19.61■□□□□ 0.73
CCM2-209ENST00000477605 DDX3YO15523 660 aaKnown RBP19.61■□□□□ 0.73
CCM2-209ENST00000477605 POLR2MP0CAP2 368 aa19.61■□□□□ 0.73
CCM2-209ENST00000477605 TNFAIP3P21580 790 aa19.61■□□□□ 0.73
CCM2-209ENST00000477605 STAT2P52630 851 aa19.61■□□□□ 0.73
CCM2-209ENST00000477605 PTENP60484 403 aa19.61■□□□□ 0.73
CCM2-209ENST00000477605 PLS1Q14651 629 aa19.61■□□□□ 0.73
CCM2-209ENST00000477605 NLRP14Q86W24 1093 aa19.61■□□□□ 0.73
CCM2-209ENST00000477605 GLYCTKQ8IVS8 523 aa19.61■□□□□ 0.73
CCM2-209ENST00000477605 RHOT2Q8IXI1 618 aa19.61■□□□□ 0.73
CCM2-209ENST00000477605 NEK9Q8TD19 979 aa19.61■□□□□ 0.73
CCM2-209ENST00000477605 ZNF473Q8WTR7 871 aaKnown RBP19.61■□□□□ 0.73
CCM2-209ENST00000477605 AMACRQ9UHK6 382 aa19.61■□□□□ 0.73
CCM2-209ENST00000477605 GOLGA6L10A0A0M3HER8 536 aa19.61■□□□□ 0.73
CCM2-209ENST00000477605 SFI1A8K8P3 1242 aa19.61■□□□□ 0.73
CCM2-209ENST00000477605 P4HA2O15460 535 aa19.61■□□□□ 0.73
CCM2-209ENST00000477605 GH2P01242 217 aa19.61■□□□□ 0.73
CCM2-209ENST00000477605 ALCAMQ13740 583 aa19.61■□□□□ 0.73
CCM2-209ENST00000477605 GPR162Q16538 588 aa19.61■□□□□ 0.73
CCM2-209ENST00000477605 TMC3Q7Z5M5 1100 aa19.61■□□□□ 0.73
CCM2-209ENST00000477605 CCT8L2Q96SF2 557 aa19.61■□□□□ 0.73
CCM2-209ENST00000477605 STRA6Q9BX79 667 aa19.61■□□□□ 0.73
CCM2-209ENST00000477605 GPR88Q9GZN0 384 aa19.61■□□□□ 0.73
CCM2-209ENST00000477605 DBNDD1Q9H9R9 158 aa19.61■□□□□ 0.73
CCM2-209ENST00000477605 SAMM50Q9Y512 469 aa19.61■□□□□ 0.73
CCM2-209ENST00000477605 DAPK3O43293 454 aa19.6■□□□□ 0.73
CCM2-209ENST00000477605 GAS7O60861 476 aa19.6■□□□□ 0.73
CCM2-209ENST00000477605 MAPTP10636 758 aaKnown RBP19.6■□□□□ 0.73
CCM2-209ENST00000477605 ITGA4P13612 1032 aa19.6■□□□□ 0.73
CCM2-209ENST00000477605 HSPA6P17066 643 aa19.6■□□□□ 0.73
CCM2-209ENST00000477605 DRG2P55039 364 aaKnown RBP19.6■□□□□ 0.73
CCM2-209ENST00000477605 SETQ01105 290 aaPredicted RBP19.6■□□□□ 0.73
CCM2-209ENST00000477605 MYL7Q01449 175 aa19.6■□□□□ 0.73
CCM2-209ENST00000477605 ZC2HC1CQ53FD0 456 aaPredicted RBP19.6■□□□□ 0.73
CCM2-209ENST00000477605 DDX42Q86XP3 938 aaKnown RBP eCLIP19.6■□□□□ 0.73
CCM2-209ENST00000477605 OTUD6BQ8N6M0 293 aa19.6■□□□□ 0.73
CCM2-209ENST00000477605 MYCBPAPQ8TBZ2 947 aa19.6■□□□□ 0.73
CCM2-209ENST00000477605 NEUROG2Q9H2A3 272 aa19.6■□□□□ 0.73
CCM2-209ENST00000477605 ARHGEF10LQ9HCE6 1279 aa19.6■□□□□ 0.73
CCM2-209ENST00000477605 SLTMQ9NWH9 1034 aaKnown RBP eCLIP19.6■□□□□ 0.73
CCM2-209ENST00000477605 HERC5Q9UII4 1024 aaKnown RBP19.6■□□□□ 0.73
CCM2-209ENST00000477605 NRXN2Q9P2S2 1712 aa19.6■□□□□ 0.73
CCM2-209ENST00000477605 ANKRD31Q8N7Z5 1873 aa19.6■□□□□ 0.73
CCM2-209ENST00000477605 MIF4GDA9UHW6 222 aaKnown RBP19.6■□□□□ 0.73
CCM2-209ENST00000477605 FGGP02679 453 aa19.6■□□□□ 0.73
CCM2-209ENST00000477605 BCRP11274 1271 aa19.6■□□□□ 0.73
CCM2-209ENST00000477605 DHX34Q14147 1143 aaKnown RBP19.6■□□□□ 0.73
CCM2-209ENST00000477605 CEP55Q53EZ4 464 aa19.6■□□□□ 0.73
CCM2-209ENST00000477605 SUGP1Q8IWZ8 645 aaKnown RBP19.6■□□□□ 0.73
CCM2-209ENST00000477605 MRPL11Q9Y3B7 192 aaKnown RBP19.6■□□□□ 0.73
CCM2-209ENST00000477605 PFASO15067 1338 aa19.59■□□□□ 0.73
CCM2-209ENST00000477605 MYO1FO00160 1098 aa19.59■□□□□ 0.73
CCM2-209ENST00000477605 TULP1O00294 542 aaPredicted RBP19.59■□□□□ 0.73
CCM2-209ENST00000477605 TTI1O43156 1089 aa19.59■□□□□ 0.73
CCM2-209ENST00000477605 PPFIA2O75334 1257 aa19.59■□□□□ 0.73
CCM2-209ENST00000477605 FSBPO95073 299 aa19.59■□□□□ 0.73
CCM2-209ENST00000477605 VIL1P09327 827 aaKnown RBP19.59■□□□□ 0.73
CCM2-209ENST00000477605 GBP1P32455 592 aa19.59■□□□□ 0.73
CCM2-209ENST00000477605 BFSP1Q12934 665 aa19.59■□□□□ 0.73
CCM2-209ENST00000477605 ODR4Q5SWX8 454 aa19.59■□□□□ 0.73
CCM2-209ENST00000477605 DNAAF5Q86Y56 855 aa19.59■□□□□ 0.73
CCM2-209ENST00000477605 UBLCP1Q8WVY7 318 aaPredicted RBP19.59■□□□□ 0.73
CCM2-209ENST00000477605 BCAS3Q9H6U6 928 aa19.59■□□□□ 0.73
CCM2-209ENST00000477605 SLC12A6Q9UHW9 1150 aa19.59■□□□□ 0.73
CCM2-209ENST00000477605 PLA2G6O60733 806 aa19.58■□□□□ 0.73
CCM2-209ENST00000477605 PAEPP09466 180 aa19.58■□□□□ 0.73
CCM2-209ENST00000477605 LIG3P49916 1009 aa19.58■□□□□ 0.73
CCM2-209ENST00000477605 CETN1Q12798 172 aa19.58■□□□□ 0.73
CCM2-209ENST00000477605 DRP2Q13474 957 aa19.58■□□□□ 0.73
CCM2-209ENST00000477605 CBWD6Q4V339 395 aa19.58■□□□□ 0.73
CCM2-209ENST00000477605 CBWD3Q5JTY5 395 aa19.58■□□□□ 0.73
CCM2-209ENST00000477605 CBWD5Q5RIA9 395 aa19.58■□□□□ 0.73
CCM2-209ENST00000477605 C11orf63Q6NUN7 778 aa19.58■□□□□ 0.73
CCM2-209ENST00000477605 B3GNT9Q6UX72 402 aa19.58■□□□□ 0.73
CCM2-209ENST00000477605 MMS22LQ6ZRQ5 1243 aa19.58■□□□□ 0.73
CCM2-209ENST00000477605 ARMC9Q7Z3E5 817 aa19.58■□□□□ 0.73
CCM2-209ENST00000477605 CHURC1Q8WUH1 139 aa19.58■□□□□ 0.73
CCM2-209ENST00000477605 RIT2Q99578 217 aa19.58■□□□□ 0.73
CCM2-209ENST00000477605 TXLNGYQ9BZA5 131 aa19.58■□□□□ 0.73
CCM2-209ENST00000477605 RABEP2Q9H5N1 569 aa19.58■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms