RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 F2P00734 622 aa6.59□□□□□ -1.35
VPS50-213ENST00000477572 ACRV1P26436 265 aa6.59□□□□□ -1.35
VPS50-213ENST00000477572 MIIPQ5JXC2 388 aa6.59□□□□□ -1.35
VPS50-213ENST00000477572 KRT40Q6A162 431 aa6.59□□□□□ -1.35
VPS50-213ENST00000477572 TIGD7Q6NT04 549 aaPredicted RBP6.59□□□□□ -1.35
VPS50-213ENST00000477572 USP51Q70EK9 711 aa6.59□□□□□ -1.35
VPS50-213ENST00000477572 ADGRE4PQ86SQ3 457 aa6.59□□□□□ -1.35
VPS50-213ENST00000477572 CLEC14AQ86T13 490 aa6.59□□□□□ -1.35
VPS50-213ENST00000477572 GPR101Q96P66 508 aaPredicted RBP6.59□□□□□ -1.35
VPS50-213ENST00000477572 MRIQ9BWK5 157 aa6.59□□□□□ -1.35
VPS50-213ENST00000477572 MS4A5Q9H3V2 200 aa6.59□□□□□ -1.35
VPS50-213ENST00000477572 TOX4O94842 621 aa6.58□□□□□ -1.36
VPS50-213ENST00000477572 ZNF202O95125 648 aa6.58□□□□□ -1.36
VPS50-213ENST00000477572 HMGA2P52926 109 aa6.58□□□□□ -1.36
VPS50-213ENST00000477572 BCAR1P56945 870 aa6.58□□□□□ -1.36
VPS50-213ENST00000477572 ADAM8P78325 824 aa6.58□□□□□ -1.36
VPS50-213ENST00000477572 DSG1Q02413 1049 aa6.58□□□□□ -1.36
VPS50-213ENST00000477572 PTH1RQ03431 593 aa6.58□□□□□ -1.36
VPS50-213ENST00000477572 ADCY1Q08828 1119 aa6.58□□□□□ -1.36
VPS50-213ENST00000477572 CRHR2Q13324 411 aa6.58□□□□□ -1.36
VPS50-213ENST00000477572 LSM12Q3MHD2 195 aaKnown RBP6.58□□□□□ -1.36
VPS50-213ENST00000477572 BMP8AQ7Z5Y6 402 aa6.58□□□□□ -1.36
VPS50-213ENST00000477572 JAZF1Q86VZ6 243 aa6.58□□□□□ -1.36
VPS50-213ENST00000477572 PHYKPLQ8IUZ5 450 aa6.58□□□□□ -1.36
VPS50-213ENST00000477572 SYNPOQ8N3V7 929 aa6.58□□□□□ -1.36
VPS50-213ENST00000477572 PLA2G15Q8NCC3 412 aa6.58□□□□□ -1.36
VPS50-213ENST00000477572 NINJ1Q92982 152 aa6.58□□□□□ -1.36
VPS50-213ENST00000477572 GIT1Q9Y2X7 761 aa6.58□□□□□ -1.36
VPS50-213ENST00000477572 CDC45O75419 566 aa6.57□□□□□ -1.36
VPS50-213ENST00000477572 PCDH8O95206 1070 aa6.57□□□□□ -1.36
VPS50-213ENST00000477572 SEPT7Q16181 437 aaKnown RBP6.57□□□□□ -1.36
VPS50-213ENST00000477572 KANSL1Q7Z3B3 1105 aa6.57□□□□□ -1.36
VPS50-213ENST00000477572 NPM2Q86SE8 214 aaKnown RBP6.57□□□□□ -1.36
VPS50-213ENST00000477572 NIM1KQ8IY84 436 aa6.57□□□□□ -1.36
VPS50-213ENST00000477572 LPPQ93052 612 aa6.57□□□□□ -1.36
VPS50-213ENST00000477572 NOL10Q9BSC4 688 aaKnown RBP6.57□□□□□ -1.36
VPS50-213ENST00000477572 TARS2Q9BW92 718 aaKnown RBP6.57□□□□□ -1.36
VPS50-213ENST00000477572 MSL2Q9HCI7 577 aa6.57□□□□□ -1.36
VPS50-213ENST00000477572 IL23AQ9NPF7 189 aa6.57□□□□□ -1.36
VPS50-213ENST00000477572 RCAN3Q9UKA8 241 aa6.57□□□□□ -1.36
VPS50-213ENST00000477572 PMS2P1A4D2B8 440 aa6.56□□□□□ -1.36
VPS50-213ENST00000477572 ELL2O00472 640 aaPredicted RBP6.56□□□□□ -1.36
VPS50-213ENST00000477572 CYR61O00622 381 aa6.56□□□□□ -1.36
VPS50-213ENST00000477572 TGM5O43548 720 aa6.56□□□□□ -1.36
VPS50-213ENST00000477572 RRP1BQ14684 758 aaKnown RBP6.56□□□□□ -1.36
VPS50-213ENST00000477572 KIAA1841Q6NSI8 718 aa6.56□□□□□ -1.36
VPS50-213ENST00000477572 FAM111BQ6SJ93 734 aa6.56□□□□□ -1.36
VPS50-213ENST00000477572 Q6ZRM9 215 aa6.56□□□□□ -1.36
VPS50-213ENST00000477572 ZNF496Q96IT1 587 aaPredicted RBP6.56□□□□□ -1.36
VPS50-213ENST00000477572 PCED1AQ9H1Q7 454 aa6.56□□□□□ -1.36
VPS50-213ENST00000477572 SYNPO2Q9UMS6 1093 aa6.56□□□□□ -1.36
VPS50-213ENST00000477572 A0A0A6YYJ9 748 aa6.55□□□□□ -1.36
VPS50-213ENST00000477572 A0A0A6YYK5 440 aaPredicted RBP6.55□□□□□ -1.36
VPS50-213ENST00000477572 DAPK3O43293 454 aa6.55□□□□□ -1.36
VPS50-213ENST00000477572 NARSO43776 548 aaKnown RBP6.55□□□□□ -1.36
VPS50-213ENST00000477572 OPHN1O60890 802 aa6.55□□□□□ -1.36
VPS50-213ENST00000477572 SCNN1GP51170 649 aa6.55□□□□□ -1.36
VPS50-213ENST00000477572 KPNA1P52294 538 aaPredicted RBP6.55□□□□□ -1.36
VPS50-213ENST00000477572 SMAD3P84022 425 aaKnown RBP6.55□□□□□ -1.36
VPS50-213ENST00000477572 ELAVL1Q15717 326 aaKnown RBP6.55□□□□□ -1.36
VPS50-213ENST00000477572 KIF18BQ86Y91 864 aa6.55□□□□□ -1.36
VPS50-213ENST00000477572 ELOA2Q8IYF1 753 aaPredicted RBP6.55□□□□□ -1.36
VPS50-213ENST00000477572 THEMISQ8N1K5 641 aaPredicted RBP6.55□□□□□ -1.36
VPS50-213ENST00000477572 EFHBQ8N7U6 833 aa6.55□□□□□ -1.36
VPS50-213ENST00000477572 PGBD4Q96DM1 585 aa6.55□□□□□ -1.36
VPS50-213ENST00000477572 TCF25Q9BQ70 676 aa6.55□□□□□ -1.36
VPS50-213ENST00000477572 ORAI3Q9BRQ5 295 aa6.55□□□□□ -1.36
VPS50-213ENST00000477572 SOX7Q9BT81 388 aa6.55□□□□□ -1.36
VPS50-213ENST00000477572 HAPLN2Q9GZV7 340 aa6.55□□□□□ -1.36
VPS50-213ENST00000477572 XPO5Q9HAV4 1204 aaKnown RBP eCLIP6.55□□□□□ -1.36
VPS50-213ENST00000477572 SPTLC3Q9NUV7 552 aa6.55□□□□□ -1.36
VPS50-213ENST00000477572 MSRAQ9UJ68 235 aa6.55□□□□□ -1.36
VPS50-213ENST00000477572 USP18Q9UMW8 372 aa6.55□□□□□ -1.36
VPS50-213ENST00000477572 VSIG10L2P0DP72 767 aa6.54□□□□□ -1.36
VPS50-213ENST00000477572 POU3F2P20265 443 aaPredicted RBP6.54□□□□□ -1.36
VPS50-213ENST00000477572 CD40P25942 277 aa6.54□□□□□ -1.36
VPS50-213ENST00000477572 SCNN1BP51168 640 aa6.54□□□□□ -1.36
VPS50-213ENST00000477572 FHL2Q14192 279 aa6.54□□□□□ -1.36
VPS50-213ENST00000477572 SART3Q15020 963 aaKnown RBP6.54□□□□□ -1.36
VPS50-213ENST00000477572 DALRD3Q5D0E6 543 aaKnown RBP6.54□□□□□ -1.36
VPS50-213ENST00000477572 PASD1Q8IV76 773 aa6.54□□□□□ -1.36
VPS50-213ENST00000477572 ZZZ3Q8IYH5 903 aa6.54□□□□□ -1.36
VPS50-213ENST00000477572 MB21D1Q8N884 522 aa6.54□□□□□ -1.36
VPS50-213ENST00000477572 SMC1BQ8NDV3 1235 aa6.54□□□□□ -1.36
VPS50-213ENST00000477572 CACTINQ8WUQ7 758 aaKnown RBP6.54□□□□□ -1.36
VPS50-213ENST00000477572 MPHOSPH9Q99550 1183 aa6.54□□□□□ -1.36
VPS50-213ENST00000477572 PITHD1Q9GZP4 211 aaPredicted RBP6.54□□□□□ -1.36
VPS50-213ENST00000477572 STC2O76061 302 aa6.53□□□□□ -1.36
VPS50-213ENST00000477572 IL2P60568 153 aa6.53□□□□□ -1.36
VPS50-213ENST00000477572 ZBTB41Q5SVQ8 909 aa6.53□□□□□ -1.36
VPS50-213ENST00000477572 FKBP15Q5T1M5 1219 aa6.53□□□□□ -1.36
VPS50-213ENST00000477572 GSPT2Q8IYD1 628 aaKnown RBP6.53□□□□□ -1.36
VPS50-213ENST00000477572 ANKRD35Q8N283 1001 aa6.53□□□□□ -1.36
VPS50-213ENST00000477572 LEO1Q8WVC0 666 aaPredicted RBP6.53□□□□□ -1.36
VPS50-213ENST00000477572 FERMT2Q96AC1 680 aa6.53□□□□□ -1.36
VPS50-213ENST00000477572 ARL8AQ96BM9 186 aa6.53□□□□□ -1.36
VPS50-213ENST00000477572 UIMC1Q96RL1 719 aa6.53□□□□□ -1.36
VPS50-213ENST00000477572 ING3Q9NXR8 418 aa6.53□□□□□ -1.36
VPS50-213ENST00000477572 CEP72Q9P209 647 aa6.53□□□□□ -1.36
VPS50-213ENST00000477572 REXO2Q9Y3B8 237 aaKnown RBP6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms