RNA–Protein interactions for RNA: ENST00000477508.1

TOP3A-205, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 600 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-205ENST00000477508 STAT6P42226 847 aa14.55□□□□□ -0.08
TOP3A-205ENST00000477508 KCNJ6P48051 423 aa14.55□□□□□ -0.08
TOP3A-205ENST00000477508 CSPP1Q1MSJ5 1256 aa14.55□□□□□ -0.08
TOP3A-205ENST00000477508 FAM102BQ5T8I3 360 aa14.55□□□□□ -0.08
TOP3A-205ENST00000477508 ADALQ6DHV7 355 aa14.55□□□□□ -0.08
TOP3A-205ENST00000477508 C1orf186Q6ZWK4 172 aa14.55□□□□□ -0.08
TOP3A-205ENST00000477508 SRGAP1Q7Z6B7 1085 aa14.55□□□□□ -0.08
TOP3A-205ENST00000477508 PHOSPHO2Q8TCD6 241 aa14.55□□□□□ -0.08
TOP3A-205ENST00000477508 LARP4BQ92615 738 aaKnown RBP14.55□□□□□ -0.08
TOP3A-205ENST00000477508 RAD54LQ92698 747 aa14.55□□□□□ -0.08
TOP3A-205ENST00000477508 IFT74Q96LB3 600 aa14.55□□□□□ -0.08
TOP3A-205ENST00000477508 FDXACB1Q9BRP7 624 aaPredicted RBP14.55□□□□□ -0.08
TOP3A-205ENST00000477508 NFKBIZQ9BYH8 718 aa14.55□□□□□ -0.08
TOP3A-205ENST00000477508 POLR3FQ9H1D9 316 aaPredicted RBP14.55□□□□□ -0.08
TOP3A-205ENST00000477508 AGO3Q9H9G7 860 aaKnown RBP14.55□□□□□ -0.08
TOP3A-205ENST00000477508 CDHR5Q9HBB8 845 aa14.55□□□□□ -0.08
TOP3A-205ENST00000477508 NOC2LQ9Y3T9 749 aaKnown RBP14.55□□□□□ -0.08
TOP3A-205ENST00000477508 SLC4A7Q9Y6M7 1214 aa14.55□□□□□ -0.08
TOP3A-205ENST00000477508 TRIOBPQ9H2D6 2365 aa14.54□□□□□ -0.08
TOP3A-205ENST00000477508 ZBBXA8MT70 800 aa14.54□□□□□ -0.08
TOP3A-205ENST00000477508 SFPQP23246 707 aaKnown RBP eCLIP14.54□□□□□ -0.08
TOP3A-205ENST00000477508 CMA1P23946 247 aa14.54□□□□□ -0.08
TOP3A-205ENST00000477508 CD52P31358 61 aa14.54□□□□□ -0.08
TOP3A-205ENST00000477508 NFX1Q12986 1120 aaKnown RBP14.54□□□□□ -0.08
TOP3A-205ENST00000477508 LRIT3Q3SXY7 679 aa14.54□□□□□ -0.08
TOP3A-205ENST00000477508 RESP18Q5W5W9 173 aa14.54□□□□□ -0.08
TOP3A-205ENST00000477508 SHC4Q6S5L8 630 aa14.54□□□□□ -0.08
TOP3A-205ENST00000477508 SV2BQ7L1I2 683 aa14.54□□□□□ -0.08
TOP3A-205ENST00000477508 MAEAQ7L5Y9 396 aa14.54□□□□□ -0.08
TOP3A-205ENST00000477508 KSR1Q8IVT5 923 aa14.54□□□□□ -0.08
TOP3A-205ENST00000477508 IQUBQ8NA54 791 aa14.54□□□□□ -0.08
TOP3A-205ENST00000477508 RNF149Q8NC42 400 aa14.54□□□□□ -0.08
TOP3A-205ENST00000477508 TMEM40Q8WWA1 233 aa14.54□□□□□ -0.08
TOP3A-205ENST00000477508 PPP1R16BQ96T49 567 aa14.54□□□□□ -0.08
TOP3A-205ENST00000477508 SLC9A7Q96T83 725 aa14.54□□□□□ -0.08
TOP3A-205ENST00000477508 LRRC27Q9C0I9 530 aa14.54□□□□□ -0.08
TOP3A-205ENST00000477508 C2orf40Q9H1Z8 148 aa14.54□□□□□ -0.08
TOP3A-205ENST00000477508 ERVK-5Q9HDB9 667 aa14.54□□□□□ -0.08
TOP3A-205ENST00000477508 BLOC1S4Q9NUP1 217 aa14.54□□□□□ -0.08
TOP3A-205ENST00000477508 ST3GAL5Q9UNP4 418 aa14.54□□□□□ -0.08
TOP3A-205ENST00000477508 SIP14410 1827 aa14.53□□□□□ -0.08
TOP3A-205ENST00000477508 PHLPP2Q6ZVD8 1323 aa14.53□□□□□ -0.08
TOP3A-205ENST00000477508 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.53□□□□□ -0.08
TOP3A-205ENST00000477508 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.53□□□□□ -0.08
TOP3A-205ENST00000477508 AMHP03971 560 aa14.53□□□□□ -0.08
TOP3A-205ENST00000477508 GLRA2P23416 452 aa14.53□□□□□ -0.08
TOP3A-205ENST00000477508 NAMPTP43490 491 aa14.53□□□□□ -0.08
TOP3A-205ENST00000477508 PTENP60484 403 aa14.53□□□□□ -0.08
TOP3A-205ENST00000477508 NCBP1Q09161 790 aaKnown RBP14.53□□□□□ -0.08
TOP3A-205ENST00000477508 FAM228AQ86W67 206 aa14.53□□□□□ -0.08
TOP3A-205ENST00000477508 GPBP1Q86WP2 473 aa14.53□□□□□ -0.08
TOP3A-205ENST00000477508 RUSC1Q9BVN2 902 aa14.53□□□□□ -0.08
TOP3A-205ENST00000477508 OSBPL7Q9BZF2 842 aa14.53□□□□□ -0.08
TOP3A-205ENST00000477508 MAGEF1Q9HAY2 307 aa14.53□□□□□ -0.08
TOP3A-205ENST00000477508 IFT122Q9HBG6 1241 aa14.53□□□□□ -0.08
TOP3A-205ENST00000477508 GPRC5CQ9NQ84 441 aa14.53□□□□□ -0.08
TOP3A-205ENST00000477508 CHST12Q9NRB3 414 aa14.53□□□□□ -0.08
TOP3A-205ENST00000477508 ODF2LQ9ULJ1 636 aa14.53□□□□□ -0.08
TOP3A-205ENST00000477508 A0A1W2PQ27 194 aa14.52□□□□□ -0.09
TOP3A-205ENST00000477508 A0A1W2PQ64 194 aa14.52□□□□□ -0.09
TOP3A-205ENST00000477508 A0A1W2PQD8 194 aa14.52□□□□□ -0.09
TOP3A-205ENST00000477508 LRRIQ4A6NIV6 560 aa14.52□□□□□ -0.09
TOP3A-205ENST00000477508 KRT18P05783 430 aaKnown RBP14.52□□□□□ -0.09
TOP3A-205ENST00000477508 ZSCAN20P17040 1043 aaPredicted RBP14.52□□□□□ -0.09
TOP3A-205ENST00000477508 SCP2P22307 547 aa14.52□□□□□ -0.09
TOP3A-205ENST00000477508 EFNA5P52803 228 aa14.52□□□□□ -0.09
TOP3A-205ENST00000477508 WDR5P61964 334 aaKnown RBP14.52□□□□□ -0.09
TOP3A-205ENST00000477508 AMPD3Q01432 767 aa14.52□□□□□ -0.09
TOP3A-205ENST00000477508 CAPSQ13938 189 aa14.52□□□□□ -0.09
TOP3A-205ENST00000477508 MCM6Q14566 821 aa14.52□□□□□ -0.09
TOP3A-205ENST00000477508 ZBTB8OSQ8IWT0 167 aa14.52□□□□□ -0.09
TOP3A-205ENST00000477508 ASAP3Q8TDY4 903 aa14.52□□□□□ -0.09
TOP3A-205ENST00000477508 TSPYL2Q9H2G4 693 aaPredicted RBP14.52□□□□□ -0.09
TOP3A-205ENST00000477508 C1orf112Q9NSG2 853 aa14.52□□□□□ -0.09
TOP3A-205ENST00000477508 DACT1Q9NYF0 836 aa14.52□□□□□ -0.09
TOP3A-205ENST00000477508 CXXC1Q9P0U4 656 aaPredicted RBP14.52□□□□□ -0.09
TOP3A-205ENST00000477508 USP25Q9UHP3 1055 aa14.52□□□□□ -0.09
TOP3A-205ENST00000477508 DENND3A2RUS2 1198 aa14.51□□□□□ -0.09
TOP3A-205ENST00000477508 GOLGA6L4A6NEF3 574 aa14.51□□□□□ -0.09
TOP3A-205ENST00000477508 ENPP3O14638 875 aa14.51□□□□□ -0.09
TOP3A-205ENST00000477508 HIP1RO75146 1068 aa14.51□□□□□ -0.09
TOP3A-205ENST00000477508 ATP2A2P16615 1042 aaKnown RBP14.51□□□□□ -0.09
TOP3A-205ENST00000477508 AXLP30530 894 aa14.51□□□□□ -0.09
TOP3A-205ENST00000477508 SMTNP53814 917 aa14.51□□□□□ -0.09
TOP3A-205ENST00000477508 SMAD3P84022 425 aaKnown RBP14.51□□□□□ -0.09
TOP3A-205ENST00000477508 DMP1Q13316 513 aaPredicted RBP14.51□□□□□ -0.09
TOP3A-205ENST00000477508 DHX8Q14562 1220 aaKnown RBP14.51□□□□□ -0.09
TOP3A-205ENST00000477508 NAALADL2Q58DX5 795 aa14.51□□□□□ -0.09
TOP3A-205ENST00000477508 ARSHQ5FYA8 562 aa14.51□□□□□ -0.09
TOP3A-205ENST00000477508 CATSPER4Q7RTX7 472 aa14.51□□□□□ -0.09
TOP3A-205ENST00000477508 PDILTQ8N807 584 aa14.51□□□□□ -0.09
TOP3A-205ENST00000477508 DEPTORQ8TB45 409 aa14.51□□□□□ -0.09
TOP3A-205ENST00000477508 ZNF668Q96K58 619 aaPredicted RBP14.51□□□□□ -0.09
TOP3A-205ENST00000477508 NTPCRQ9BSD7 190 aaKnown RBP14.51□□□□□ -0.09
TOP3A-205ENST00000477508 PANK2Q9BZ23 570 aa14.51□□□□□ -0.09
TOP3A-205ENST00000477508 TNMDQ9H2S6 317 aa14.51□□□□□ -0.09
TOP3A-205ENST00000477508 LARSQ9P2J5 1176 aaKnown RBP14.51□□□□□ -0.09
TOP3A-205ENST00000477508 KCNH3Q9ULD8 1083 aa14.51□□□□□ -0.09
TOP3A-205ENST00000477508 MICAL3Q7RTP6 2002 aa14.51□□□□□ -0.09
TOP3A-205ENST00000477508 FAM237AA0A1B0GTK4 181 aa14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms