RNA–Protein interactions for RNA: ENST00000476994.1

SREBF1-211, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-211ENST00000476994 PPME1Q9Y570 386 aa19.59■□□□□ 0.73
SREBF1-211ENST00000476994 ARHGEF35A5YM69 484 aa19.58■□□□□ 0.72
SREBF1-211ENST00000476994 TRAK2O60296 914 aa19.58■□□□□ 0.72
SREBF1-211ENST00000476994 AFMP43652 599 aa19.58■□□□□ 0.72
SREBF1-211ENST00000476994 DPYDQ12882 1025 aa19.58■□□□□ 0.72
SREBF1-211ENST00000476994 PPFIA1Q13136 1202 aa19.58■□□□□ 0.72
SREBF1-211ENST00000476994 GPBP1Q86WP2 473 aa19.58■□□□□ 0.72
SREBF1-211ENST00000476994 LINC01465Q8N7H1 131 aa19.58■□□□□ 0.72
SREBF1-211ENST00000476994 LMBR1Q8WVP7 490 aa19.58■□□□□ 0.72
SREBF1-211ENST00000476994 MBLAC1A4D2B0 266 aaPredicted RBP19.57■□□□□ 0.72
SREBF1-211ENST00000476994 C22orf31O95567 290 aa19.57■□□□□ 0.72
SREBF1-211ENST00000476994 SSBP05455 408 aaKnown RBP eCLIP19.57■□□□□ 0.72
SREBF1-211ENST00000476994 GUCY2CP25092 1073 aa19.57■□□□□ 0.72
SREBF1-211ENST00000476994 MAPK7Q13164 816 aa19.57■□□□□ 0.72
SREBF1-211ENST00000476994 CUL4BQ13620 913 aa19.57■□□□□ 0.72
SREBF1-211ENST00000476994 DHX8Q14562 1220 aaKnown RBP19.57■□□□□ 0.72
SREBF1-211ENST00000476994 GRIK4Q16099 956 aa19.57■□□□□ 0.72
SREBF1-211ENST00000476994 SKOR2Q2VWA4 1001 aaPredicted RBP19.57■□□□□ 0.72
SREBF1-211ENST00000476994 KANK3Q6NY19 840 aa19.57■□□□□ 0.72
SREBF1-211ENST00000476994 RBM43Q6ZSC3 357 aaKnown RBP19.57■□□□□ 0.72
SREBF1-211ENST00000476994 HERC6Q8IVU3 1022 aa19.57■□□□□ 0.72
SREBF1-211ENST00000476994 DAW1Q8N136 415 aa19.57■□□□□ 0.72
SREBF1-211ENST00000476994 SPATA20Q8TB22 786 aa19.57■□□□□ 0.72
SREBF1-211ENST00000476994 VWCEQ96DN2 955 aa19.57■□□□□ 0.72
SREBF1-211ENST00000476994 ASB2Q96Q27 587 aa19.57■□□□□ 0.72
SREBF1-211ENST00000476994 ZBED2Q9BTP6 218 aa19.57■□□□□ 0.72
SREBF1-211ENST00000476994 PRDM6Q9NQX0 595 aa19.57■□□□□ 0.72
SREBF1-211ENST00000476994 KCND2Q9NZV8 630 aa19.57■□□□□ 0.72
SREBF1-211ENST00000476994 HDAC6Q9UBN7 1215 aa19.57■□□□□ 0.72
SREBF1-211ENST00000476994 CHD7Q9P2D1 2997 aa19.56■□□□□ 0.72
SREBF1-211ENST00000476994 NPHP3-ACAD11A0A0J9YXS1 232 aa19.56■□□□□ 0.72
SREBF1-211ENST00000476994 FRMD3A2A2Y4 597 aa19.56■□□□□ 0.72
SREBF1-211ENST00000476994 TNFRSF10AO00220 468 aa19.56■□□□□ 0.72
SREBF1-211ENST00000476994 TLL1O43897 1013 aa19.56■□□□□ 0.72
SREBF1-211ENST00000476994 KLRC4O43908 158 aa19.56■□□□□ 0.72
SREBF1-211ENST00000476994 USO1O60763 962 aaKnown RBP19.56■□□□□ 0.72
SREBF1-211ENST00000476994 EFCAB14O75071 495 aa19.56■□□□□ 0.72
SREBF1-211ENST00000476994 MAFO75444 373 aaPredicted RBP19.56■□□□□ 0.72
SREBF1-211ENST00000476994 DGAT1O75907 488 aa19.56■□□□□ 0.72
SREBF1-211ENST00000476994 PTK7Q13308 1070 aa19.56■□□□□ 0.72
SREBF1-211ENST00000476994 MKRN4PQ13434 485 aaPredicted RBP19.56■□□□□ 0.72
SREBF1-211ENST00000476994 PNOCQ13519 176 aa19.56■□□□□ 0.72
SREBF1-211ENST00000476994 GIT2Q14161 759 aa19.56■□□□□ 0.72
SREBF1-211ENST00000476994 POSTNQ15063 836 aa19.56■□□□□ 0.72
SREBF1-211ENST00000476994 SKIV2LQ15477 1246 aaKnown RBP19.56■□□□□ 0.72
SREBF1-211ENST00000476994 AAK1Q2M2I8 961 aa19.56■□□□□ 0.72
SREBF1-211ENST00000476994 CNKSR3Q6P9H4 555 aa19.56■□□□□ 0.72
SREBF1-211ENST00000476994 DDX12PQ92771 950 aa19.56■□□□□ 0.72
SREBF1-211ENST00000476994 ZBTB10Q96DT7 871 aa19.56■□□□□ 0.72
SREBF1-211ENST00000476994 CTAGE1Q96RT6 745 aa19.56■□□□□ 0.72
SREBF1-211ENST00000476994 REEP2Q9BRK0 252 aa19.56■□□□□ 0.72
SREBF1-211ENST00000476994 NUP62CLQ9H1M0 184 aa19.56■□□□□ 0.72
SREBF1-211ENST00000476994 BLZF1Q9H2G9 400 aa19.56■□□□□ 0.72
SREBF1-211ENST00000476994 SETD4Q9NVD3 440 aa19.56■□□□□ 0.72
SREBF1-211ENST00000476994 PTPRSQ13332 1948 aa19.56■□□□□ 0.72
SREBF1-211ENST00000476994 NCOR1O75376 2440 aa19.55■□□□□ 0.72
SREBF1-211ENST00000476994 NRCAMQ92823 1304 aa19.55■□□□□ 0.72
SREBF1-211ENST00000476994 RRN3P2A6NIE6 340 aa19.55■□□□□ 0.72
SREBF1-211ENST00000476994 MYL1P05976 194 aa19.55■□□□□ 0.72
SREBF1-211ENST00000476994 CKBP12277 381 aa19.55■□□□□ 0.72
SREBF1-211ENST00000476994 RFC5P40937 340 aa19.55■□□□□ 0.72
SREBF1-211ENST00000476994 EHHADHQ08426 723 aa19.55■□□□□ 0.72
SREBF1-211ENST00000476994 RBL2Q08999 1139 aa19.55■□□□□ 0.72
SREBF1-211ENST00000476994 EMC2Q15006 297 aa19.55■□□□□ 0.72
SREBF1-211ENST00000476994 CAMK4Q16566 473 aa19.55■□□□□ 0.72
SREBF1-211ENST00000476994 ERCC4Q92889 916 aaPredicted RBP19.55■□□□□ 0.72
SREBF1-211ENST00000476994 PRRC2BQ5JSZ5 2229 aaKnown RBP19.55■□□□□ 0.72
SREBF1-211ENST00000476994 TRANK1O15050 2925 aa19.55■□□□□ 0.72
SREBF1-211ENST00000476994 RSPH10B2B2RC85 870 aa19.54■□□□□ 0.72
SREBF1-211ENST00000476994 RSPH10BP0C881 870 aa19.54■□□□□ 0.72
SREBF1-211ENST00000476994 SARSP49591 514 aaKnown RBP19.54■□□□□ 0.72
SREBF1-211ENST00000476994 ZNF131P52739 623 aa19.54■□□□□ 0.72
SREBF1-211ENST00000476994 ZNF200P98182 395 aaPredicted RBP19.54■□□□□ 0.72
SREBF1-211ENST00000476994 AMPD3Q01432 767 aa19.54■□□□□ 0.72
SREBF1-211ENST00000476994 DRP2Q13474 957 aa19.54■□□□□ 0.72
SREBF1-211ENST00000476994 IKBKEQ14164 716 aa19.54■□□□□ 0.72
SREBF1-211ENST00000476994 CCDC183Q5T5S1 534 aa19.54■□□□□ 0.72
SREBF1-211ENST00000476994 CAVIN1Q6NZI2 390 aaKnown RBP19.54■□□□□ 0.72
SREBF1-211ENST00000476994 MTHFD1LQ6UB35 978 aa19.54■□□□□ 0.72
SREBF1-211ENST00000476994 ARNTL2Q8WYA1 636 aa19.54■□□□□ 0.72
SREBF1-211ENST00000476994 CERS4Q9HA82 394 aa19.54■□□□□ 0.72
SREBF1-211ENST00000476994 ATP6V0A4Q9HBG4 840 aa19.54■□□□□ 0.72
SREBF1-211ENST00000476994 BMP2KQ9NSY1 1161 aaPredicted RBP19.54■□□□□ 0.72
SREBF1-211ENST00000476994 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP19.53■□□□□ 0.72
SREBF1-211ENST00000476994 ABHD14A-ACY1A0A1B0GW23 586 aa19.53■□□□□ 0.72
SREBF1-211ENST00000476994 KLRC1P26715 233 aa19.53■□□□□ 0.72
SREBF1-211ENST00000476994 WDR5P61964 334 aaKnown RBP19.53■□□□□ 0.72
SREBF1-211ENST00000476994 IGBP1P78318 339 aa19.53■□□□□ 0.72
SREBF1-211ENST00000476994 CACNB1Q02641 598 aaPredicted RBP19.53■□□□□ 0.72
SREBF1-211ENST00000476994 TBC1D8BQ0IIM8 1120 aa19.53■□□□□ 0.72
SREBF1-211ENST00000476994 NT5DC1Q5TFE4 455 aa19.53■□□□□ 0.72
SREBF1-211ENST00000476994 DYMQ7RTS9 669 aa19.53■□□□□ 0.72
SREBF1-211ENST00000476994 CCDC43Q96MW1 224 aaKnown RBP19.53■□□□□ 0.72
SREBF1-211ENST00000476994 TIPINQ9BVW5 301 aa19.53■□□□□ 0.72
SREBF1-211ENST00000476994 LRRC27Q9C0I9 530 aa19.53■□□□□ 0.72
SREBF1-211ENST00000476994 POLD4Q9HCU8 107 aa19.53■□□□□ 0.72
SREBF1-211ENST00000476994 GPRC5CQ9NQ84 441 aa19.53■□□□□ 0.72
SREBF1-211ENST00000476994 TUBE1Q9UJT0 475 aa19.53■□□□□ 0.72
SREBF1-211ENST00000476994 ODF2LQ9ULJ1 636 aa19.53■□□□□ 0.72
SREBF1-211ENST00000476994 TCF20Q9UGU0 1960 aaKnown RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms