RNA–Protein interactions for RNA: ENST00000476954.1

SMG5-204, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 1,161 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-204ENST00000476954 DNAJB4Q9UDY4 337 aa17.51■□□□□ 0.39
SMG5-204ENST00000476954 FRYQ5TBA9 3013 aa17.51■□□□□ 0.39
SMG5-204ENST00000476954 SETXQ7Z333 2677 aaKnown RBP17.5■□□□□ 0.39
SMG5-204ENST00000476954 DDX39AO00148 427 aaKnown RBP17.5■□□□□ 0.39
SMG5-204ENST00000476954 SLC30A4O14863 429 aa17.5■□□□□ 0.39
SMG5-204ENST00000476954 RFPL2O75678 378 aa17.5■□□□□ 0.39
SMG5-204ENST00000476954 CCNE2O96020 404 aa17.5■□□□□ 0.39
SMG5-204ENST00000476954 GALTP07902 379 aa17.5■□□□□ 0.39
SMG5-204ENST00000476954 ATP4AP20648 1035 aa17.5■□□□□ 0.39
SMG5-204ENST00000476954 CLCN3P51790 818 aa17.5■□□□□ 0.39
SMG5-204ENST00000476954 TROAPQ12815 778 aa17.5■□□□□ 0.39
SMG5-204ENST00000476954 SNW1Q13573 536 aaKnown RBP17.5■□□□□ 0.39
SMG5-204ENST00000476954 HTR4Q13639 388 aa17.5■□□□□ 0.39
SMG5-204ENST00000476954 LPAL2Q16609 132 aa17.5■□□□□ 0.39
SMG5-204ENST00000476954 CCDC60Q8IWA6 550 aaPredicted RBP17.5■□□□□ 0.39
SMG5-204ENST00000476954 METTL13Q8N6R0 699 aa17.5■□□□□ 0.39
SMG5-204ENST00000476954 LPPQ93052 612 aa17.5■□□□□ 0.39
SMG5-204ENST00000476954 MRPL9Q9BYD2 267 aaKnown RBP17.5■□□□□ 0.39
SMG5-204ENST00000476954 ZSCAN32Q9NX65 697 aa17.5■□□□□ 0.39
SMG5-204ENST00000476954 NUMBLQ9Y6R0 609 aa17.5■□□□□ 0.39
SMG5-204ENST00000476954 IGF2RP11717 2491 aa17.5■□□□□ 0.39
SMG5-204ENST00000476954 COL1A2P08123 1366 aa17.5■□□□□ 0.39
SMG5-204ENST00000476954 IGKV6D-21A0A0A0MT36 114 aa17.49■□□□□ 0.39
SMG5-204ENST00000476954 A0A0U1RQF3 1178 aa17.49■□□□□ 0.39
SMG5-204ENST00000476954 LOC105378220A0A1B0GUY1 285 aaPredicted RBP17.49■□□□□ 0.39
SMG5-204ENST00000476954 INPPL1O15357 1258 aa17.49■□□□□ 0.39
SMG5-204ENST00000476954 LILRB3O75022 631 aa17.49■□□□□ 0.39
SMG5-204ENST00000476954 ATG7O95352 703 aa17.49■□□□□ 0.39
SMG5-204ENST00000476954 LAMP2P13473 410 aa17.49■□□□□ 0.39
SMG5-204ENST00000476954 SLC11A1P49279 550 aa17.49■□□□□ 0.39
SMG5-204ENST00000476954 NLRP11P59045 1033 aaKnown RBP17.49■□□□□ 0.39
SMG5-204ENST00000476954 GPC5P78333 572 aa17.49■□□□□ 0.39
SMG5-204ENST00000476954 IMMTQ16891 758 aaKnown RBP17.49■□□□□ 0.39
SMG5-204ENST00000476954 ZNF484Q5JVG2 852 aa17.49■□□□□ 0.39
SMG5-204ENST00000476954 TRMT1LQ7Z2T5 733 aaKnown RBP17.49■□□□□ 0.39
SMG5-204ENST00000476954 CMASQ8NFW8 434 aaPredicted RBP17.49■□□□□ 0.39
SMG5-204ENST00000476954 BBXQ8WY36 941 aaPredicted RBP17.49■□□□□ 0.39
SMG5-204ENST00000476954 NELL1Q92832 810 aa17.49■□□□□ 0.39
SMG5-204ENST00000476954 RILPL2Q969X0 211 aa17.49■□□□□ 0.39
SMG5-204ENST00000476954 SDF4Q9BRK5 362 aa17.49■□□□□ 0.39
SMG5-204ENST00000476954 EMILIN2Q9BXX0 1053 aa17.49■□□□□ 0.39
SMG5-204ENST00000476954 BCO2Q9BYV7 579 aa17.49■□□□□ 0.39
SMG5-204ENST00000476954 GBP3Q9H0R5 595 aa17.49■□□□□ 0.39
SMG5-204ENST00000476954 ADAMTS10Q9H324 1103 aa17.49■□□□□ 0.39
SMG5-204ENST00000476954 MYH9P35579 1960 aaKnown RBP17.49■□□□□ 0.39
SMG5-204ENST00000476954 RALGAPA1Q6GYQ0 2036 aa17.48■□□□□ 0.39
SMG5-204ENST00000476954 NFASCO94856 1347 aa17.48■□□□□ 0.39
SMG5-204ENST00000476954 KANSL1LA0AUZ9 987 aa17.48■□□□□ 0.39
SMG5-204ENST00000476954 MEIS3P2A8K0S8 358 aa17.48■□□□□ 0.39
SMG5-204ENST00000476954 ANHXE9PGG2 379 aa17.48■□□□□ 0.39
SMG5-204ENST00000476954 BACH1O14867 736 aa17.48■□□□□ 0.39
SMG5-204ENST00000476954 MAFGO15525 162 aa17.48■□□□□ 0.39
SMG5-204ENST00000476954 SDSP20132 328 aa17.48■□□□□ 0.39
SMG5-204ENST00000476954 CD72P21854 359 aa17.48■□□□□ 0.39
SMG5-204ENST00000476954 MFAP1P55081 439 aaKnown RBP17.48■□□□□ 0.39
SMG5-204ENST00000476954 UBXN2BQ14CS0 331 aa17.48■□□□□ 0.39
SMG5-204ENST00000476954 ANKRD45Q5TZF3 282 aa17.48■□□□□ 0.39
SMG5-204ENST00000476954 GET4Q7L5D6 327 aaPredicted RBP17.48■□□□□ 0.39
SMG5-204ENST00000476954 SMG7Q92540 1137 aaKnown RBP17.48■□□□□ 0.39
SMG5-204ENST00000476954 STAMQ92783 540 aa17.48■□□□□ 0.39
SMG5-204ENST00000476954 NXPE3Q969Y0 559 aa17.48■□□□□ 0.39
SMG5-204ENST00000476954 ZNF707Q96C28 371 aaPredicted RBP17.48■□□□□ 0.39
SMG5-204ENST00000476954 MXRA8Q9BRK3 442 aa17.48■□□□□ 0.39
SMG5-204ENST00000476954 CNNM2Q9H8M5 875 aa17.48■□□□□ 0.39
SMG5-204ENST00000476954 PSTPIP2Q9H939 334 aa17.48■□□□□ 0.39
SMG5-204ENST00000476954 TBC1D13Q9NVG8 400 aa17.48■□□□□ 0.39
SMG5-204ENST00000476954 PCDHA6Q9UN73 950 aa17.48■□□□□ 0.39
SMG5-204ENST00000476954 INPP5FQ9Y2H2 1132 aa17.48■□□□□ 0.39
SMG5-204ENST00000476954 PCDHA8Q9Y5H6 950 aa17.48■□□□□ 0.39
SMG5-204ENST00000476954 C2CD2LO14523 706 aa17.47■□□□□ 0.39
SMG5-204ENST00000476954 CSDE1O75534 798 aaKnown RBP17.47■□□□□ 0.39
SMG5-204ENST00000476954 SPATA31D3P0C874 917 aa17.47■□□□□ 0.39
SMG5-204ENST00000476954 SLC26A2P50443 739 aa17.47■□□□□ 0.39
SMG5-204ENST00000476954 DMWDQ09019 674 aa17.47■□□□□ 0.39
SMG5-204ENST00000476954 CWC27Q6UX04 472 aaKnown RBP17.47■□□□□ 0.39
SMG5-204ENST00000476954 ABHD15Q6UXT9 468 aa17.47■□□□□ 0.39
SMG5-204ENST00000476954 SPATA31D4Q6ZUB0 917 aa17.47■□□□□ 0.39
SMG5-204ENST00000476954 NETO1Q8TDF5 533 aa17.47■□□□□ 0.39
SMG5-204ENST00000476954 DDX23Q9BUQ8 820 aaKnown RBP17.47■□□□□ 0.39
SMG5-204ENST00000476954 GMEB2Q9UKD1 530 aa17.47■□□□□ 0.39
SMG5-204ENST00000476954 ANGPTL2Q9UKU9 493 aa17.47■□□□□ 0.39
SMG5-204ENST00000476954 FAM170BA6NMN3 283 aa17.46■□□□□ 0.39
SMG5-204ENST00000476954 TBC1D4O60343 1298 aa17.46■□□□□ 0.39
SMG5-204ENST00000476954 GDF9O60383 454 aa17.46■□□□□ 0.39
SMG5-204ENST00000476954 EIF4BP23588 611 aaKnown RBP17.46■□□□□ 0.39
SMG5-204ENST00000476954 PDXDC2PQ6P474 469 aa17.46■□□□□ 0.39
SMG5-204ENST00000476954 ZNF280BQ86YH2 543 aa17.46■□□□□ 0.39
SMG5-204ENST00000476954 FGF14Q92915 247 aa17.46■□□□□ 0.39
SMG5-204ENST00000476954 RRP36Q96EU6 259 aaKnown RBP17.46■□□□□ 0.39
SMG5-204ENST00000476954 SHDQ96IW2 340 aa17.46■□□□□ 0.39
SMG5-204ENST00000476954 AGO4Q9HCK5 861 aaKnown RBP17.46■□□□□ 0.39
SMG5-204ENST00000476954 ZNF302Q9NR11 478 aa17.46■□□□□ 0.39
SMG5-204ENST00000476954 AKT3Q9Y243 479 aa17.46■□□□□ 0.39
SMG5-204ENST00000476954 MTCL1Q9Y4B5 1905 aaKnown RBP17.46■□□□□ 0.39
SMG5-204ENST00000476954 WDR81Q562E7 1941 aa17.45■□□□□ 0.38
SMG5-204ENST00000476954 hCG_1642624A0A1W2PR95 340 aa17.45■□□□□ 0.38
SMG5-204ENST00000476954 SPDYE3A6NKU9 549 aa17.45■□□□□ 0.38
SMG5-204ENST00000476954 IFIT3O14879 490 aaKnown RBP17.45■□□□□ 0.38
SMG5-204ENST00000476954 PMLP29590 882 aa17.45■□□□□ 0.38
SMG5-204ENST00000476954 MLF2Q15773 248 aaPredicted RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms