RNA–Protein interactions for RNA: ENST00000476858.5

APTX-220, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,068 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-220ENST00000476858 TMEM119Q4V9L6 283 aa13.85□□□□□ -0.19
APTX-220ENST00000476858 PADI6Q6TGC4 694 aa13.85□□□□□ -0.19
APTX-220ENST00000476858 ERMNQ8TAM6 284 aa13.85□□□□□ -0.19
APTX-220ENST00000476858 PHOSPHO2Q8TCD6 241 aa13.85□□□□□ -0.19
APTX-220ENST00000476858 SLC7A3Q8WY07 619 aa13.85□□□□□ -0.19
APTX-220ENST00000476858 MYLIPQ8WY64 445 aa13.85□□□□□ -0.19
APTX-220ENST00000476858 APBB2Q92870 758 aa13.85□□□□□ -0.19
APTX-220ENST00000476858 EPSTI1Q96J88 318 aa13.85□□□□□ -0.19
APTX-220ENST00000476858 SCLT1Q96NL6 688 aa13.85□□□□□ -0.19
APTX-220ENST00000476858 NACC1Q96RE7 527 aa13.85□□□□□ -0.19
APTX-220ENST00000476858 MTRQ99707 1265 aa13.85□□□□□ -0.19
APTX-220ENST00000476858 CSRNP2Q9H175 543 aa13.85□□□□□ -0.19
APTX-220ENST00000476858 POLR3FQ9H1D9 316 aaPredicted RBP13.85□□□□□ -0.19
APTX-220ENST00000476858 PRDM12Q9H4Q4 367 aa13.85□□□□□ -0.19
APTX-220ENST00000476858 ZNF576Q9H609 170 aa13.85□□□□□ -0.19
APTX-220ENST00000476858 RNF19AQ9NV58 838 aa13.85□□□□□ -0.19
APTX-220ENST00000476858 DBR1Q9UK59 544 aaKnown RBP13.85□□□□□ -0.19
APTX-220ENST00000476858 SQORQ9Y6N5 450 aa13.85□□□□□ -0.19
APTX-220ENST00000476858 REV3LO60673 3130 aa13.84□□□□□ -0.19
APTX-220ENST00000476858 A0A087X0B3 334 aa13.84□□□□□ -0.19
APTX-220ENST00000476858 NPHP3-ACAD11A0A0J9YXS1 232 aa13.84□□□□□ -0.19
APTX-220ENST00000476858 LINC01553A4QN01 128 aa13.84□□□□□ -0.19
APTX-220ENST00000476858 TTLL13PA6NNM8 815 aa13.84□□□□□ -0.19
APTX-220ENST00000476858 AMHP03971 560 aa13.84□□□□□ -0.19
APTX-220ENST00000476858 LINC00271P0C7V0 271 aa13.84□□□□□ -0.19
APTX-220ENST00000476858 HTRA4P83105 476 aaPredicted RBP13.84□□□□□ -0.19
APTX-220ENST00000476858 ADGRE1Q14246 886 aa13.84□□□□□ -0.19
APTX-220ENST00000476858 KARSQ15046 597 aaKnown RBP13.84□□□□□ -0.19
APTX-220ENST00000476858 ZNF697Q5TEC3 545 aa13.84□□□□□ -0.19
APTX-220ENST00000476858 ARL6IP4Q66PJ3 421 aaKnown RBP13.84□□□□□ -0.19
APTX-220ENST00000476858 CABP7Q86V35 215 aa13.84□□□□□ -0.19
APTX-220ENST00000476858 DAW1Q8N136 415 aa13.84□□□□□ -0.19
APTX-220ENST00000476858 RNF149Q8NC42 400 aa13.84□□□□□ -0.19
APTX-220ENST00000476858 CDX2Q99626 313 aaPredicted RBP13.84□□□□□ -0.19
APTX-220ENST00000476858 KIFC3Q9BVG8 833 aa13.84□□□□□ -0.19
APTX-220ENST00000476858 RC3H2Q9HBD1 1191 aaKnown RBP13.84□□□□□ -0.19
APTX-220ENST00000476858 ATP6V0A4Q9HBG4 840 aa13.84□□□□□ -0.19
APTX-220ENST00000476858 MSRAQ9UJ68 235 aa13.84□□□□□ -0.19
APTX-220ENST00000476858 MTUS1Q9ULD2 1270 aa13.84□□□□□ -0.19
APTX-220ENST00000476858 ARHGEF35A5YM69 484 aa13.83□□□□□ -0.2
APTX-220ENST00000476858 MEIS3P2A8K0S8 358 aa13.83□□□□□ -0.2
APTX-220ENST00000476858 C9IYK1 514 aa13.83□□□□□ -0.2
APTX-220ENST00000476858 B4GALT5O43286 388 aa13.83□□□□□ -0.2
APTX-220ENST00000476858 DGAT1O75907 488 aa13.83□□□□□ -0.2
APTX-220ENST00000476858 XRCC6P12956 609 aaKnown RBP eCLIP13.83□□□□□ -0.2
APTX-220ENST00000476858 ATF7P17544 494 aaPredicted RBP13.83□□□□□ -0.2
APTX-220ENST00000476858 DNM2P50570 870 aa13.83□□□□□ -0.2
APTX-220ENST00000476858 RAD51AP2Q09MP3 1159 aa13.83□□□□□ -0.2
APTX-220ENST00000476858 MAPK7Q13164 816 aa13.83□□□□□ -0.2
APTX-220ENST00000476858 RAB30Q15771 203 aa13.83□□□□□ -0.2
APTX-220ENST00000476858 LONRF3Q496Y0 759 aa13.83□□□□□ -0.2
APTX-220ENST00000476858 HYIQ5T013 277 aa13.83□□□□□ -0.2
APTX-220ENST00000476858 FAM102BQ5T8I3 360 aa13.83□□□□□ -0.2
APTX-220ENST00000476858 KRT79Q5XKE5 535 aa13.83□□□□□ -0.2
APTX-220ENST00000476858 PPP2R2DQ66LE6 453 aa13.83□□□□□ -0.2
APTX-220ENST00000476858 GPR153Q6NV75 609 aa13.83□□□□□ -0.2
APTX-220ENST00000476858 USP38Q8NB14 1042 aa13.83□□□□□ -0.2
APTX-220ENST00000476858 PSPC1Q8WXF1 523 aaKnown RBP13.83□□□□□ -0.2
APTX-220ENST00000476858 C17orf80Q9BSJ5 609 aa13.83□□□□□ -0.2
APTX-220ENST00000476858 ZBED2Q9BTP6 218 aa13.83□□□□□ -0.2
APTX-220ENST00000476858 BLOC1S4Q9NUP1 217 aa13.83□□□□□ -0.2
APTX-220ENST00000476858 ADGRA3Q8IWK6 1321 aa13.83□□□□□ -0.2
APTX-220ENST00000476858 COL6A3P12111 3177 aa13.83□□□□□ -0.2
APTX-220ENST00000476858 COL4A4P53420 1690 aaPredicted RBP13.82□□□□□ -0.2
APTX-220ENST00000476858 TTC3P53804 2025 aa13.82□□□□□ -0.2
APTX-220ENST00000476858 SFI1A8K8P3 1242 aa13.82□□□□□ -0.2
APTX-220ENST00000476858 SLC34A2O95436 690 aa13.82□□□□□ -0.2
APTX-220ENST00000476858 EYA4O95677 639 aa13.82□□□□□ -0.2
APTX-220ENST00000476858 BRD1O95696 1058 aa13.82□□□□□ -0.2
APTX-220ENST00000476858 RPLP2P05387 115 aaKnown RBP13.82□□□□□ -0.2
APTX-220ENST00000476858 FGFR1P11362 822 aa13.82□□□□□ -0.2
APTX-220ENST00000476858 CYP11B2P19099 503 aa13.82□□□□□ -0.2
APTX-220ENST00000476858 PLCG1P19174 1290 aa13.82□□□□□ -0.2
APTX-220ENST00000476858 HOXA11P31270 313 aaPredicted RBP13.82□□□□□ -0.2
APTX-220ENST00000476858 NASPP49321 788 aaPredicted RBP13.82□□□□□ -0.2
APTX-220ENST00000476858 DNM1Q05193 864 aaKnown RBP13.82□□□□□ -0.2
APTX-220ENST00000476858 SLC39A14Q15043 492 aa13.82□□□□□ -0.2
APTX-220ENST00000476858 AMHR2Q16671 573 aa13.82□□□□□ -0.2
APTX-220ENST00000476858 PAN2Q504Q3 1202 aaKnown RBP13.82□□□□□ -0.2
APTX-220ENST00000476858 ARSHQ5FYA8 562 aa13.82□□□□□ -0.2
APTX-220ENST00000476858 HAUS3Q68CZ6 603 aa13.82□□□□□ -0.2
APTX-220ENST00000476858 ZNF410Q86VK4 478 aa13.82□□□□□ -0.2
APTX-220ENST00000476858 CDR2LQ86X02 465 aaPredicted RBP13.82□□□□□ -0.2
APTX-220ENST00000476858 LINC00301Q8NCQ3 95 aa13.82□□□□□ -0.2
APTX-220ENST00000476858 SYMPKQ92797 1274 aaKnown RBP13.82□□□□□ -0.2
APTX-220ENST00000476858 CPB2Q96IY4 423 aa13.82□□□□□ -0.2
APTX-220ENST00000476858 RAD9AQ99638 391 aa13.82□□□□□ -0.2
APTX-220ENST00000476858 GCOM2Q9BZD3 368 aaPredicted RBP13.82□□□□□ -0.2
APTX-220ENST00000476858 ZSCAN16Q9H4T2 348 aaPredicted RBP13.82□□□□□ -0.2
APTX-220ENST00000476858 SLC28A3Q9HAS3 691 aa13.82□□□□□ -0.2
APTX-220ENST00000476858 RGS18Q9NS28 235 aa13.82□□□□□ -0.2
APTX-220ENST00000476858 GPR182O15218 404 aa13.81□□□□□ -0.2
APTX-220ENST00000476858 EFCAB14O75071 495 aa13.81□□□□□ -0.2
APTX-220ENST00000476858 DGKIO75912 1065 aa13.81□□□□□ -0.2
APTX-220ENST00000476858 SLC12A3P55017 1021 aa13.81□□□□□ -0.2
APTX-220ENST00000476858 PTENP60484 403 aa13.81□□□□□ -0.2
APTX-220ENST00000476858 FAM189BP81408 668 aa13.81□□□□□ -0.2
APTX-220ENST00000476858 MBTD1Q05BQ5 628 aa13.81□□□□□ -0.2
APTX-220ENST00000476858 DHX8Q14562 1220 aaKnown RBP13.81□□□□□ -0.2
APTX-220ENST00000476858 UBXN11Q5T124 520 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms