RNA–Protein interactions for RNA: ENST00000476597.1

SEC13-214, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 614 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-214ENST00000476597 ADGRD2Q7Z7M1 963 aa12.08□□□□□ -0.48
SEC13-214ENST00000476597 KSR1Q8IVT5 923 aa12.08□□□□□ -0.48
SEC13-214ENST00000476597 COLGALT1Q8NBJ5 622 aa12.08□□□□□ -0.48
SEC13-214ENST00000476597 PRPF31Q8WWY3 499 aaKnown RBP12.08□□□□□ -0.48
SEC13-214ENST00000476597 SLC7A3Q8WY07 619 aa12.08□□□□□ -0.48
SEC13-214ENST00000476597 PPP2R3CQ969Q6 453 aa12.08□□□□□ -0.48
SEC13-214ENST00000476597 ZSCAN31Q96LW9 406 aaPredicted RBP12.08□□□□□ -0.48
SEC13-214ENST00000476597 MTMR9Q96QG7 549 aa12.08□□□□□ -0.48
SEC13-214ENST00000476597 LLPHQ9BRT6 129 aaKnown RBP12.08□□□□□ -0.48
SEC13-214ENST00000476597 IGFLR1Q9H665 355 aa12.08□□□□□ -0.48
SEC13-214ENST00000476597 IFT122Q9HBG6 1241 aa12.08□□□□□ -0.48
SEC13-214ENST00000476597 CD320Q9NPF0 282 aa12.08□□□□□ -0.48
SEC13-214ENST00000476597 DACT1Q9NYF0 836 aa12.08□□□□□ -0.48
SEC13-214ENST00000476597 HCSTQ9UBK5 93 aa12.08□□□□□ -0.48
SEC13-214ENST00000476597 WNT7AO00755 349 aa12.07□□□□□ -0.48
SEC13-214ENST00000476597 ASAP2O43150 1006 aa12.07□□□□□ -0.48
SEC13-214ENST00000476597 ZNF623O75123 536 aa12.07□□□□□ -0.48
SEC13-214ENST00000476597 CSPG5O95196 566 aa12.07□□□□□ -0.48
SEC13-214ENST00000476597 LYPLA2O95372 231 aa12.07□□□□□ -0.48
SEC13-214ENST00000476597 ATF7P17544 494 aaPredicted RBP12.07□□□□□ -0.48
SEC13-214ENST00000476597 LAG3P18627 525 aa12.07□□□□□ -0.48
SEC13-214ENST00000476597 SFPQP23246 707 aaKnown RBP eCLIP12.07□□□□□ -0.48
SEC13-214ENST00000476597 TXKP42681 527 aa12.07□□□□□ -0.48
SEC13-214ENST00000476597 PHKA2P46019 1235 aa12.07□□□□□ -0.48
SEC13-214ENST00000476597 FOSBP53539 338 aa12.07□□□□□ -0.48
SEC13-214ENST00000476597 POLGP54098 1239 aaPredicted RBP12.07□□□□□ -0.48
SEC13-214ENST00000476597 PLCB3Q01970 1234 aa12.07□□□□□ -0.48
SEC13-214ENST00000476597 CYP4A11Q02928 519 aa12.07□□□□□ -0.48
SEC13-214ENST00000476597 CALCRLQ16602 461 aa12.07□□□□□ -0.48
SEC13-214ENST00000476597 C8orf34Q49A92 452 aa12.07□□□□□ -0.48
SEC13-214ENST00000476597 XKR9Q5GH70 373 aa12.07□□□□□ -0.48
SEC13-214ENST00000476597 CLLU1OSQ5K130 101 aa12.07□□□□□ -0.48
SEC13-214ENST00000476597 CCDC83Q8IWF9 413 aa12.07□□□□□ -0.48
SEC13-214ENST00000476597 TPH2Q8IWU9 490 aa12.07□□□□□ -0.48
SEC13-214ENST00000476597 RNF169Q8NCN4 708 aa12.07□□□□□ -0.48
SEC13-214ENST00000476597 TMEM143Q96AN5 459 aa12.07□□□□□ -0.48
SEC13-214ENST00000476597 EIF2AK1Q9BQI3 630 aaKnown RBP12.07□□□□□ -0.48
SEC13-214ENST00000476597 TTC12Q9H892 705 aaPredicted RBP12.07□□□□□ -0.48
SEC13-214ENST00000476597 COL4A3BPQ9Y5P4 624 aa12.07□□□□□ -0.48
SEC13-214ENST00000476597 EVPLQ92817 2033 aa12.06□□□□□ -0.48
SEC13-214ENST00000476597 LINC01565O15544 149 aa12.06□□□□□ -0.48
SEC13-214ENST00000476597 GAS2O43903 313 aaKnown RBP12.06□□□□□ -0.48
SEC13-214ENST00000476597 NEMFO60524 1076 aa12.06□□□□□ -0.48
SEC13-214ENST00000476597 SRGAP2CP0DJJ0 459 aa12.06□□□□□ -0.48
SEC13-214ENST00000476597 ERVFC1P60507 584 aa12.06□□□□□ -0.48
SEC13-214ENST00000476597 LAMTOR4Q0VGL1 99 aa12.06□□□□□ -0.48
SEC13-214ENST00000476597 SAFBQ15424 915 aaKnown RBP eCLIP12.06□□□□□ -0.48
SEC13-214ENST00000476597 KCNT2Q6UVM3 1135 aa12.06□□□□□ -0.48
SEC13-214ENST00000476597 CATSPER4Q7RTX7 472 aa12.06□□□□□ -0.48
SEC13-214ENST00000476597 SRGAP1Q7Z6B7 1085 aa12.06□□□□□ -0.48
SEC13-214ENST00000476597 THNSL1Q8IYQ7 743 aa12.06□□□□□ -0.48
SEC13-214ENST00000476597 ABI1Q8IZP0 508 aa12.06□□□□□ -0.48
SEC13-214ENST00000476597 GJD3Q8N144 294 aa12.06□□□□□ -0.48
SEC13-214ENST00000476597 LRRC43Q8N309 656 aa12.06□□□□□ -0.48
SEC13-214ENST00000476597 EFHBQ8N7U6 833 aa12.06□□□□□ -0.48
SEC13-214ENST00000476597 MICAL1Q8TDZ2 1067 aa12.06□□□□□ -0.48
SEC13-214ENST00000476597 TCP11Q8WWU5 503 aa12.06□□□□□ -0.48
SEC13-214ENST00000476597 PSPC1Q8WXF1 523 aaKnown RBP12.06□□□□□ -0.48
SEC13-214ENST00000476597 MRPS27Q92552 414 aaKnown RBP12.06□□□□□ -0.48
SEC13-214ENST00000476597 NLRP4Q96MN2 994 aa12.06□□□□□ -0.48
SEC13-214ENST00000476597 C1QTNF1Q9BXJ1 281 aa12.06□□□□□ -0.48
SEC13-214ENST00000476597 TMEM60Q9H2L4 133 aa12.06□□□□□ -0.48
SEC13-214ENST00000476597 EPHX3Q9H6B9 360 aa12.06□□□□□ -0.48
SEC13-214ENST00000476597 PUF60Q9UHX1 559 aaKnown RBP12.06□□□□□ -0.48
SEC13-214ENST00000476597 PIN4Q9Y237 131 aaKnown RBP12.06□□□□□ -0.48
SEC13-214ENST00000476597 FAM50BQ9Y247 325 aa12.06□□□□□ -0.48
SEC13-214ENST00000476597 LZTS1Q9Y250 596 aa12.06□□□□□ -0.48
SEC13-214ENST00000476597 MYH9P35579 1960 aaKnown RBP12.05□□□□□ -0.48
SEC13-214ENST00000476597 FSCN2O14926 492 aa12.05□□□□□ -0.48
SEC13-214ENST00000476597 MBTPS2O43462 519 aa12.05□□□□□ -0.48
SEC13-214ENST00000476597 SKIP12755 728 aa12.05□□□□□ -0.48
SEC13-214ENST00000476597 XRCC6P12956 609 aaKnown RBP eCLIP12.05□□□□□ -0.48
SEC13-214ENST00000476597 HOXA11P31270 313 aaPredicted RBP12.05□□□□□ -0.48
SEC13-214ENST00000476597 NRIP1P48552 1158 aa12.05□□□□□ -0.48
SEC13-214ENST00000476597 GUCY1B3Q02153 619 aa12.05□□□□□ -0.48
SEC13-214ENST00000476597 EMC2Q15006 297 aa12.05□□□□□ -0.48
SEC13-214ENST00000476597 TWF2Q6IBS0 349 aaKnown RBP12.05□□□□□ -0.48
SEC13-214ENST00000476597 PDE12Q6L8Q7 609 aaKnown RBP12.05□□□□□ -0.48
SEC13-214ENST00000476597 RBM23Q86U06 439 aaKnown RBP12.05□□□□□ -0.48
SEC13-214ENST00000476597 FERMT3Q86UX7 667 aa12.05□□□□□ -0.48
SEC13-214ENST00000476597 FBXO18Q8NFZ0 1043 aa12.05□□□□□ -0.48
SEC13-214ENST00000476597 HELQQ8TDG4 1101 aa12.05□□□□□ -0.48
SEC13-214ENST00000476597 RSPH1Q8WYR4 309 aa12.05□□□□□ -0.48
SEC13-214ENST00000476597 KHSRPQ92945 711 aaKnown RBP eCLIP12.05□□□□□ -0.48
SEC13-214ENST00000476597 C8orf76Q96K31 380 aa12.05□□□□□ -0.48
SEC13-214ENST00000476597 MSLNLQ96KJ4 702 aa12.05□□□□□ -0.48
SEC13-214ENST00000476597 ZNF558Q96NG5 402 aa12.05□□□□□ -0.48
SEC13-214ENST00000476597 TLE6Q9H808 572 aa12.05□□□□□ -0.48
SEC13-214ENST00000476597 MINDY3Q9H8M7 445 aa12.05□□□□□ -0.48
SEC13-214ENST00000476597 XPNPEP1Q9NQW7 623 aa12.05□□□□□ -0.48
SEC13-214ENST00000476597 TLR9Q9NR96 1032 aa12.05□□□□□ -0.48
SEC13-214ENST00000476597 SH2B1Q9NRF2 756 aaPredicted RBP12.05□□□□□ -0.48
SEC13-214ENST00000476597 ANKEF1Q9NU02 776 aa12.05□□□□□ -0.48
SEC13-214ENST00000476597 FAM105AQ9NUU6 356 aa12.05□□□□□ -0.48
SEC13-214ENST00000476597 CLEC1BQ9P126 229 aa12.05□□□□□ -0.48
SEC13-214ENST00000476597 PCDHGC5Q9Y5F6 944 aa12.05□□□□□ -0.48
SEC13-214ENST00000476597 TCF20Q9UGU0 1960 aaKnown RBP12.05□□□□□ -0.48
SEC13-214ENST00000476597 C19orf67A6NJJ6 358 aa12.04□□□□□ -0.48
SEC13-214ENST00000476597 PI4K2BG5E9Z4 385 aa12.04□□□□□ -0.48
SEC13-214ENST00000476597 PER2O15055 1255 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms