RNA–Protein interactions for RNA: ENST00000476590.1

CD55-208, Transcript of CD55 molecule (Cromer blood group), humanhuman

TSL 1 (best)

Gene CD55, Length 2,163 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD55-208ENST00000476590 PIH1D3Q9NQM4 214 aaKnown RBP4.47□□□□□ -1.69
CD55-208ENST00000476590 METTL5Q9NRN9 209 aaKnown RBP4.47□□□□□ -1.69
CD55-208ENST00000476590 CLIC5Q9NZA1 410 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 IL1RAPL1Q9NZN1 696 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 MTMR6Q9Y217 621 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 LRCH1Q9Y2L9 728 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 PRKAB1Q9Y478 270 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 PCDHGB3Q9Y5G1 929 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 NR2E3Q9Y5X4 410 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 NUMBLQ9Y6R0 609 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 KDM6BO15054 1643 aa4.47□□□□□ -1.69
CD55-208ENST00000476590 PCF11O94913 1555 aaKnown RBP4.47□□□□□ -1.69
CD55-208ENST00000476590 SNAPC4Q5SXM2 1469 aa4.46□□□□□ -1.69
CD55-208ENST00000476590 POGZQ7Z3K3 1410 aa4.46□□□□□ -1.69
CD55-208ENST00000476590 ADGRL3Q9HAR2 1447 aa4.46□□□□□ -1.69
CD55-208ENST00000476590 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 TMEM238LA0A1B0GVL6 79 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 A6NJY4 79 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 M0QX08 132 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 FBP2O00757 339 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 CDK2AP1O14519 115 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 IKBKBO14920 756 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 SORBS3O60504 671 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 ALDH1L1O75891 902 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 GLRX3O76003 335 aaKnown RBP4.46□□□□□ -1.7
CD55-208ENST00000476590 LMNAP02545 664 aaKnown RBP4.46□□□□□ -1.7
CD55-208ENST00000476590 CHRNB1P11230 501 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 KCNA3P22001 575 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 ETFBP38117 255 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 ALDH5A1P51649 535 aaPredicted RBP4.46□□□□□ -1.7
CD55-208ENST00000476590 RELAQ04206 551 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 DCTN2Q13561 401 aaKnown RBP4.46□□□□□ -1.7
CD55-208ENST00000476590 FAM173BQ6P4H8 233 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 PDXDC1Q6P996 788 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 CCDC62Q6P9F0 684 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 SLC4A10Q6U841 1118 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 PPP1R3FQ6ZSY5 799 aaPredicted RBP4.46□□□□□ -1.7
CD55-208ENST00000476590 MCM10Q7L590 875 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 PLEKHM2Q8IWE5 1019 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 ANKS4BQ8N8V4 417 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 FNDC8Q8TC99 324 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 MAML1Q92585 1016 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 RPGRQ92834 1020 aaKnown RBP4.46□□□□□ -1.7
CD55-208ENST00000476590 BRF1Q92994 677 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 E2F7Q96AV8 911 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 RRP36Q96EU6 259 aaKnown RBP4.46□□□□□ -1.7
CD55-208ENST00000476590 GIMAP5Q96F15 307 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 VPS50Q96JG6 964 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 NAPGQ99747 312 aaPredicted RBP4.46□□□□□ -1.7
CD55-208ENST00000476590 FAM129AQ9BZQ8 928 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 CCSER1Q9C0I3 900 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 ESF1Q9H501 851 aaKnown RBP4.46□□□□□ -1.7
CD55-208ENST00000476590 CNGB3Q9NQW8 809 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 SLTMQ9NWH9 1034 aaKnown RBP eCLIP4.46□□□□□ -1.7
CD55-208ENST00000476590 ADAM22Q9P0K1 906 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 STAP2Q9UGK3 403 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 AGAP1Q9UPQ3 857 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 HECW2Q9P2P5 1572 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 ARHGEF12Q9NZN5 1544 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 BCL9O00512 1426 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 KDM6AO15550 1401 aaPredicted RBP4.46□□□□□ -1.7
CD55-208ENST00000476590 SSH2Q76I76 1423 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 FAM196BA6NMK8 535 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 C2orf81A6NN90 581 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 NUTM2BA6NNL0 878 aaPredicted RBP4.46□□□□□ -1.7
CD55-208ENST00000476590 NUTM2EB1AL46 878 aaPredicted RBP4.46□□□□□ -1.7
CD55-208ENST00000476590 RASA4BC9J798 803 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 AKR1B15C9JRZ8 316 aaPredicted RBP4.46□□□□□ -1.7
CD55-208ENST00000476590 E9PMD0 336 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 C3orf80F5H4A9 247 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 hCG_1984214I3L0E3 225 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 IFIT3O14879 490 aaKnown RBP4.46□□□□□ -1.7
CD55-208ENST00000476590 RASA4O43374 803 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 TRAPPC3O43617 180 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 STRNO43815 780 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 ZBED1O96006 694 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 GNAI2P04899 355 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 ZFYP08048 801 aaPredicted RBP4.46□□□□□ -1.7
CD55-208ENST00000476590 SPATA31D3P0C874 917 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 TRIM27P14373 513 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 MYL6BP14649 208 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 GLULP15104 373 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 CALB2P22676 271 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 SERPINB3P29508 390 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 HMOX2P30519 316 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 NOS2P35228 1153 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 POLD2P49005 469 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 AP3M2P53677 418 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 EXOSC10Q01780 885 aaKnown RBP4.46□□□□□ -1.7
CD55-208ENST00000476590 NIPAL4Q0D2K0 466 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 PAK2Q13177 524 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 ITIH4Q14624 930 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 KPNB1Q14974 876 aaKnown RBP4.46□□□□□ -1.7
CD55-208ENST00000476590 TNIP1Q15025 636 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 KARSQ15046 597 aaKnown RBP4.46□□□□□ -1.7
CD55-208ENST00000476590 TTF1Q15361 905 aaPredicted RBP4.46□□□□□ -1.7
CD55-208ENST00000476590 GSTA3Q16772 222 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 MYLK3Q32MK0 819 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 GRAMD1BQ3KR37 738 aa4.46□□□□□ -1.7
CD55-208ENST00000476590 LIN52Q52LA3 116 aa4.46□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms