RNA–Protein interactions for RNA: ENST00000476494.1

CLDN4-205, Transcript of claudin 4, humanhuman

TSL 4

Gene CLDN4, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN4-205ENST00000476494 CTSAP10619 480 aa7.42□□□□□ -1.22
CLDN4-205ENST00000476494 GBP2P32456 591 aaPredicted RBP7.42□□□□□ -1.22
CLDN4-205ENST00000476494 PPM1AP35813 382 aa7.42□□□□□ -1.22
CLDN4-205ENST00000476494 NOVA1P51513 510 aaKnown RBP7.42□□□□□ -1.22
CLDN4-205ENST00000476494 CLCN4P51793 760 aa7.42□□□□□ -1.22
CLDN4-205ENST00000476494 TFAP4Q01664 338 aa7.42□□□□□ -1.22
CLDN4-205ENST00000476494 KCNV1Q6PIU1 500 aa7.42□□□□□ -1.22
CLDN4-205ENST00000476494 TMEM173Q86WV6 379 aaPredicted RBP7.42□□□□□ -1.22
CLDN4-205ENST00000476494 DCAF4Q8WV16 495 aa7.42□□□□□ -1.22
CLDN4-205ENST00000476494 FGF14Q92915 247 aa7.42□□□□□ -1.22
CLDN4-205ENST00000476494 ZBTB10Q96DT7 871 aa7.42□□□□□ -1.22
CLDN4-205ENST00000476494 ZNF558Q96NG5 402 aa7.42□□□□□ -1.22
CLDN4-205ENST00000476494 KIF2CQ99661 725 aa7.42□□□□□ -1.22
CLDN4-205ENST00000476494 PXMP2Q9NR77 195 aa7.42□□□□□ -1.22
CLDN4-205ENST00000476494 PNMA2Q9UL42 364 aa7.42□□□□□ -1.22
CLDN4-205ENST00000476494 ISY1Q9ULR0 285 aaKnown RBP7.42□□□□□ -1.22
CLDN4-205ENST00000476494 RAI2Q9Y5P3 530 aa7.42□□□□□ -1.22
CLDN4-205ENST00000476494 SNX14Q9Y5W7 946 aa7.42□□□□□ -1.22
CLDN4-205ENST00000476494 KDM3AQ9Y4C1 1321 aa7.42□□□□□ -1.22
CLDN4-205ENST00000476494 PLXNB3Q9ULL4 1909 aa7.41□□□□□ -1.22
CLDN4-205ENST00000476494 ZNF213O14771 459 aa7.41□□□□□ -1.22
CLDN4-205ENST00000476494 OPLAHO14841 1288 aa7.41□□□□□ -1.22
CLDN4-205ENST00000476494 SLC27A2O14975 620 aa7.41□□□□□ -1.22
CLDN4-205ENST00000476494 FGAP02671 866 aa7.41□□□□□ -1.22
CLDN4-205ENST00000476494 PCP11498 1178 aaKnown RBP7.41□□□□□ -1.22
CLDN4-205ENST00000476494 EIF2AK2P19525 551 aaKnown RBP7.41□□□□□ -1.22
CLDN4-205ENST00000476494 PARM1Q6UWI2 310 aa7.41□□□□□ -1.22
CLDN4-205ENST00000476494 FAM43BQ6ZT52 329 aaPredicted RBP7.41□□□□□ -1.22
CLDN4-205ENST00000476494 SLC24A5Q71RS6 500 aa7.41□□□□□ -1.22
CLDN4-205ENST00000476494 VSIG10LQ86VR7 867 aa7.41□□□□□ -1.22
CLDN4-205ENST00000476494 HSCBQ8IWL3 235 aa7.41□□□□□ -1.22
CLDN4-205ENST00000476494 IFNL3Q8IZI9 196 aa7.41□□□□□ -1.22
CLDN4-205ENST00000476494 VPS52Q8N1B4 723 aa7.41□□□□□ -1.22
CLDN4-205ENST00000476494 ZNF707Q96C28 371 aaPredicted RBP7.41□□□□□ -1.22
CLDN4-205ENST00000476494 NELL2Q99435 816 aa7.41□□□□□ -1.22
CLDN4-205ENST00000476494 ADAM2Q99965 735 aa7.41□□□□□ -1.22
CLDN4-205ENST00000476494 VN1R3Q9BXE9 311 aa7.41□□□□□ -1.22
CLDN4-205ENST00000476494 TMEM117Q9H0C3 514 aa7.41□□□□□ -1.22
CLDN4-205ENST00000476494 CHRDQ9H2X0 955 aa7.41□□□□□ -1.22
CLDN4-205ENST00000476494 ELAC1Q9H777 363 aaKnown RBP7.41□□□□□ -1.22
CLDN4-205ENST00000476494 ZSWIM6Q9HCJ5 1215 aa7.41□□□□□ -1.22
CLDN4-205ENST00000476494 FAM217BQ9NTX9 383 aaPredicted RBP7.41□□□□□ -1.22
CLDN4-205ENST00000476494 TMEM161AQ9NX61 479 aa7.41□□□□□ -1.22
CLDN4-205ENST00000476494 KLK13Q9UKR3 277 aa7.41□□□□□ -1.22
CLDN4-205ENST00000476494 CYP46A1Q9Y6A2 500 aa7.41□□□□□ -1.22
CLDN4-205ENST00000476494 CLUHO75153 1309 aa7.41□□□□□ -1.22
CLDN4-205ENST00000476494 TEX15Q9BXT5 2789 aa7.41□□□□□ -1.22
CLDN4-205ENST00000476494 NOTCH4Q99466 2003 aa7.4□□□□□ -1.22
CLDN4-205ENST00000476494 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP7.4□□□□□ -1.22
CLDN4-205ENST00000476494 HYAL3O43820 417 aaPredicted RBP7.4□□□□□ -1.22
CLDN4-205ENST00000476494 CYP21A2P08686 494 aa7.4□□□□□ -1.22
CLDN4-205ENST00000476494 TSPY3P0CV98 308 aa7.4□□□□□ -1.22
CLDN4-205ENST00000476494 TSPY8P0CW00 308 aa7.4□□□□□ -1.22
CLDN4-205ENST00000476494 CEACAM1P13688 526 aa7.4□□□□□ -1.22
CLDN4-205ENST00000476494 HOXC13P31276 330 aa7.4□□□□□ -1.22
CLDN4-205ENST00000476494 CNR2P34972 360 aa7.4□□□□□ -1.22
CLDN4-205ENST00000476494 RAP1GAPP47736 663 aa7.4□□□□□ -1.22
CLDN4-205ENST00000476494 NEK4P51957 841 aa7.4□□□□□ -1.22
CLDN4-205ENST00000476494 POLGP54098 1239 aaPredicted RBP7.4□□□□□ -1.22
CLDN4-205ENST00000476494 GHRHRQ02643 423 aa7.4□□□□□ -1.22
CLDN4-205ENST00000476494 SEMA3FQ13275 785 aa7.4□□□□□ -1.22
CLDN4-205ENST00000476494 GIT2Q14161 759 aa7.4□□□□□ -1.22
CLDN4-205ENST00000476494 GAS6Q14393 721 aa7.4□□□□□ -1.22
CLDN4-205ENST00000476494 DSC3Q14574 896 aa7.4□□□□□ -1.22
CLDN4-205ENST00000476494 ANKRD1Q15327 319 aa7.4□□□□□ -1.22
CLDN4-205ENST00000476494 TMEM266Q2M3C6 531 aa7.4□□□□□ -1.22
CLDN4-205ENST00000476494 SH3PXD2AQ5TCZ1 1133 aa7.4□□□□□ -1.22
CLDN4-205ENST00000476494 VPS53Q5VIR6 699 aa7.4□□□□□ -1.22
CLDN4-205ENST00000476494 CYP26C1Q6V0L0 522 aa7.4□□□□□ -1.22
CLDN4-205ENST00000476494 RSPH3Q86UC2 560 aa7.4□□□□□ -1.22
CLDN4-205ENST00000476494 IL31RAQ8NI17 732 aa7.4□□□□□ -1.22
CLDN4-205ENST00000476494 PDCD2LQ9BRP1 358 aa7.4□□□□□ -1.22
CLDN4-205ENST00000476494 CELF4Q9BZC1 486 aaKnown RBP7.4□□□□□ -1.22
CLDN4-205ENST00000476494 NAPBQ9H115 298 aa7.4□□□□□ -1.22
CLDN4-205ENST00000476494 ARRDC1-AS1Q9H2J1 176 aa7.4□□□□□ -1.22
CLDN4-205ENST00000476494 RNF41Q9H4P4 317 aaPredicted RBP7.4□□□□□ -1.22
CLDN4-205ENST00000476494 MLXIPQ9HAP2 919 aa7.4□□□□□ -1.22
CLDN4-205ENST00000476494 CDHR5Q9HBB8 845 aa7.4□□□□□ -1.22
CLDN4-205ENST00000476494 C1orf112Q9NSG2 853 aa7.4□□□□□ -1.22
CLDN4-205ENST00000476494 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.4□□□□□ -1.22
CLDN4-205ENST00000476494 TUBE1Q9UJT0 475 aa7.4□□□□□ -1.22
CLDN4-205ENST00000476494 ANKRD17O75179 2603 aaKnown RBP7.39□□□□□ -1.23
CLDN4-205ENST00000476494 COL6A6A6NMZ7 2263 aa7.39□□□□□ -1.23
CLDN4-205ENST00000476494 EML5Q05BV3 1969 aa7.39□□□□□ -1.23
CLDN4-205ENST00000476494 CCDC195A0A1B0GUA6 201 aa7.39□□□□□ -1.23
CLDN4-205ENST00000476494 CHURC1-FNTBB4DL54 471 aa7.39□□□□□ -1.23
CLDN4-205ENST00000476494 NT5C1B-RDH14C9J2C7 533 aa7.39□□□□□ -1.23
CLDN4-205ENST00000476494 K7ESF4 209 aa7.39□□□□□ -1.23
CLDN4-205ENST00000476494 TK2O00142 265 aa7.39□□□□□ -1.23
CLDN4-205ENST00000476494 ARHGAP6O43182 974 aa7.39□□□□□ -1.23
CLDN4-205ENST00000476494 SLC3A2P08195 630 aaKnown RBP7.39□□□□□ -1.23
CLDN4-205ENST00000476494 CNPP09543 421 aaKnown RBP7.39□□□□□ -1.23
CLDN4-205ENST00000476494 SNHG28P0DPA3 235 aa7.39□□□□□ -1.23
CLDN4-205ENST00000476494 CSRP1P21291 193 aaKnown RBP7.39□□□□□ -1.23
CLDN4-205ENST00000476494 TDO2P48775 406 aa7.39□□□□□ -1.23
CLDN4-205ENST00000476494 FNTBP49356 437 aa7.39□□□□□ -1.23
CLDN4-205ENST00000476494 ADCY1Q08828 1119 aa7.39□□□□□ -1.23
CLDN4-205ENST00000476494 TRDNQ13061 729 aa7.39□□□□□ -1.23
CLDN4-205ENST00000476494 PAK2Q13177 524 aa7.39□□□□□ -1.23
CLDN4-205ENST00000476494 GRIK4Q16099 956 aa7.39□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms