RNA–Protein interactions for RNA: ENST00000476061.5

PTPN7-208, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 4

Gene PTPN7, Length 550 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-208ENST00000476061 GJA10Q969M2 543 aa11.13□□□□□ -0.63
PTPN7-208ENST00000476061 FAM122AQ96E09 287 aa11.13□□□□□ -0.63
PTPN7-208ENST00000476061 LARP6Q9BRS8 491 aaKnown RBP11.13□□□□□ -0.63
PTPN7-208ENST00000476061 MRPL9Q9BYD2 267 aaKnown RBP11.13□□□□□ -0.63
PTPN7-208ENST00000476061 NGRNQ9NPE2 291 aaKnown RBP11.13□□□□□ -0.63
PTPN7-208ENST00000476061 SLC37A4O43826 429 aa11.12□□□□□ -0.63
PTPN7-208ENST00000476061 EIF5BO60841 1220 aaKnown RBP11.12□□□□□ -0.63
PTPN7-208ENST00000476061 P4HBP07237 508 aaKnown RBP11.12□□□□□ -0.63
PTPN7-208ENST00000476061 SRGAP2BP0DMP2 458 aa11.12□□□□□ -0.63
PTPN7-208ENST00000476061 ATF7P17544 494 aaPredicted RBP11.12□□□□□ -0.63
PTPN7-208ENST00000476061 IBSPP21815 317 aaPredicted RBP11.12□□□□□ -0.63
PTPN7-208ENST00000476061 SFPQP23246 707 aaKnown RBP eCLIP11.12□□□□□ -0.63
PTPN7-208ENST00000476061 QARSP47897 775 aaKnown RBP11.12□□□□□ -0.63
PTPN7-208ENST00000476061 KRT17Q04695 432 aa11.12□□□□□ -0.63
PTPN7-208ENST00000476061 DRP2Q13474 957 aa11.12□□□□□ -0.63
PTPN7-208ENST00000476061 CLUL1Q15846 466 aa11.12□□□□□ -0.63
PTPN7-208ENST00000476061 HERC4Q5GLZ8 1057 aaPredicted RBP11.12□□□□□ -0.63
PTPN7-208ENST00000476061 RBM23Q86U06 439 aaKnown RBP11.12□□□□□ -0.63
PTPN7-208ENST00000476061 C4orf19Q8IY42 314 aa11.12□□□□□ -0.63
PTPN7-208ENST00000476061 ZNF558Q96NG5 402 aa11.12□□□□□ -0.63
PTPN7-208ENST00000476061 SCLT1Q96NL6 688 aa11.12□□□□□ -0.63
PTPN7-208ENST00000476061 CYP26B1Q9NR63 512 aa11.12□□□□□ -0.63
PTPN7-208ENST00000476061 HCSTQ9UBK5 93 aa11.12□□□□□ -0.63
PTPN7-208ENST00000476061 VAV3Q9UKW4 847 aa11.12□□□□□ -0.63
PTPN7-208ENST00000476061 TPCN1Q9ULQ1 816 aa11.12□□□□□ -0.63
PTPN7-208ENST00000476061 KCNJ14Q9UNX9 436 aa11.12□□□□□ -0.63
PTPN7-208ENST00000476061 GTF3C3Q9Y5Q9 886 aa11.12□□□□□ -0.63
PTPN7-208ENST00000476061 BDP1A6H8Y1 2624 aa11.12□□□□□ -0.63
PTPN7-208ENST00000476061 A0A087WZ62 844 aa11.11□□□□□ -0.63
PTPN7-208ENST00000476061 FAM86C2PA6NEL3 165 aa11.11□□□□□ -0.63
PTPN7-208ENST00000476061 DDX11L8A8MPP1 907 aa11.11□□□□□ -0.63
PTPN7-208ENST00000476061 LOC730098B7Z3J9 87 aa11.11□□□□□ -0.63
PTPN7-208ENST00000476061 EML1O00423 815 aa11.11□□□□□ -0.63
PTPN7-208ENST00000476061 GAS2O43903 313 aaKnown RBP11.11□□□□□ -0.63
PTPN7-208ENST00000476061 ZNF623O75123 536 aa11.11□□□□□ -0.63
PTPN7-208ENST00000476061 CSPG5O95196 566 aa11.11□□□□□ -0.63
PTPN7-208ENST00000476061 PHKA2P46019 1235 aa11.11□□□□□ -0.63
PTPN7-208ENST00000476061 RAB27AP51159 221 aa11.11□□□□□ -0.63
PTPN7-208ENST00000476061 CBX2Q14781 532 aaPredicted RBP11.11□□□□□ -0.63
PTPN7-208ENST00000476061 EPHA7Q15375 998 aa11.11□□□□□ -0.63
PTPN7-208ENST00000476061 CLLU1OSQ5K130 101 aa11.11□□□□□ -0.63
PTPN7-208ENST00000476061 SLFN12Q8IYM2 578 aa11.11□□□□□ -0.63
PTPN7-208ENST00000476061 SLC39A11Q8N1S5 342 aa11.11□□□□□ -0.63
PTPN7-208ENST00000476061 SLC7A3Q8WY07 619 aa11.11□□□□□ -0.63
PTPN7-208ENST00000476061 HAS1Q92839 578 aa11.11□□□□□ -0.63
PTPN7-208ENST00000476061 TCF25Q9BQ70 676 aa11.11□□□□□ -0.63
PTPN7-208ENST00000476061 FDXACB1Q9BRP7 624 aaPredicted RBP11.11□□□□□ -0.63
PTPN7-208ENST00000476061 KCNH6Q9H252 994 aa11.11□□□□□ -0.63
PTPN7-208ENST00000476061 DHX33Q9H6R0 707 aaKnown RBP11.11□□□□□ -0.63
PTPN7-208ENST00000476061 SPG21Q9NZD8 308 aa11.11□□□□□ -0.63
PTPN7-208ENST00000476061 SUCLA2Q9P2R7 463 aaPredicted RBP11.11□□□□□ -0.63
PTPN7-208ENST00000476061 BARX2Q9UMQ3 279 aaPredicted RBP11.11□□□□□ -0.63
PTPN7-208ENST00000476061 TMEM150BA6NC51 233 aa11.1□□□□□ -0.63
PTPN7-208ENST00000476061 PER2O15055 1255 aa11.1□□□□□ -0.63
PTPN7-208ENST00000476061 ASAP2O43150 1006 aa11.1□□□□□ -0.63
PTPN7-208ENST00000476061 CCNT1O60563 726 aaKnown RBP11.1□□□□□ -0.63
PTPN7-208ENST00000476061 CTDNEP1O95476 244 aa11.1□□□□□ -0.63
PTPN7-208ENST00000476061 HOXB8P17481 243 aaPredicted RBP11.1□□□□□ -0.63
PTPN7-208ENST00000476061 FGFR4P22455 802 aa11.1□□□□□ -0.63
PTPN7-208ENST00000476061 RFC5P40937 340 aa11.1□□□□□ -0.63
PTPN7-208ENST00000476061 ALDH7A1P49419 539 aaKnown RBP11.1□□□□□ -0.63
PTPN7-208ENST00000476061 AK2P54819 239 aa11.1□□□□□ -0.63
PTPN7-208ENST00000476061 PIK3AP1Q6ZUJ8 805 aa11.1□□□□□ -0.63
PTPN7-208ENST00000476061 OTUD6AQ7L8S5 288 aa11.1□□□□□ -0.63
PTPN7-208ENST00000476061 SRGAP1Q7Z6B7 1085 aa11.1□□□□□ -0.63
PTPN7-208ENST00000476061 RHPN2Q8IUC4 686 aa11.1□□□□□ -0.63
PTPN7-208ENST00000476061 RNF135Q8IUD6 432 aa11.1□□□□□ -0.63
PTPN7-208ENST00000476061 TCP11Q8WWU5 503 aa11.1□□□□□ -0.63
PTPN7-208ENST00000476061 SUSD6Q92537 303 aa11.1□□□□□ -0.63
PTPN7-208ENST00000476061 ZNF668Q96K58 619 aaPredicted RBP11.1□□□□□ -0.63
PTPN7-208ENST00000476061 PHF7Q9BWX1 381 aaPredicted RBP11.1□□□□□ -0.63
PTPN7-208ENST00000476061 IFT122Q9HBG6 1241 aa11.1□□□□□ -0.63
PTPN7-208ENST00000476061 FAM105AQ9NUU6 356 aa11.1□□□□□ -0.63
PTPN7-208ENST00000476061 USP15Q9Y4E8 981 aaPredicted RBP11.1□□□□□ -0.63
PTPN7-208ENST00000476061 PCDHGC5Q9Y5F6 944 aa11.1□□□□□ -0.63
PTPN7-208ENST00000476061 BAG4O95429 457 aaKnown RBP11.09□□□□□ -0.63
PTPN7-208ENST00000476061 FDPSP14324 419 aaKnown RBP11.09□□□□□ -0.63
PTPN7-208ENST00000476061 YWHABP31946 246 aaKnown RBP11.09□□□□□ -0.63
PTPN7-208ENST00000476061 KRT2P35908 639 aa11.09□□□□□ -0.63
PTPN7-208ENST00000476061 SPIRE1Q08AE8 756 aa11.09□□□□□ -0.63
PTPN7-208ENST00000476061 GIT2Q14161 759 aa11.09□□□□□ -0.63
PTPN7-208ENST00000476061 SMC1AQ14683 1233 aaKnown RBP11.09□□□□□ -0.63
PTPN7-208ENST00000476061 BMS1Q14692 1282 aaKnown RBP11.09□□□□□ -0.63
PTPN7-208ENST00000476061 PCBP1Q15365 356 aaKnown RBP eCLIP11.09□□□□□ -0.63
PTPN7-208ENST00000476061 TWF2Q6IBS0 349 aaKnown RBP11.09□□□□□ -0.63
PTPN7-208ENST00000476061 ANKRD54Q6NXT1 300 aa11.09□□□□□ -0.63
PTPN7-208ENST00000476061 TMC7Q7Z402 723 aa11.09□□□□□ -0.63
PTPN7-208ENST00000476061 BMP8AQ7Z5Y6 402 aa11.09□□□□□ -0.63
PTPN7-208ENST00000476061 MRPL43Q8N983 215 aaKnown RBP11.09□□□□□ -0.63
PTPN7-208ENST00000476061 RNF169Q8NCN4 708 aa11.09□□□□□ -0.63
PTPN7-208ENST00000476061 VN1R2Q8NFZ6 395 aa11.09□□□□□ -0.63
PTPN7-208ENST00000476061 HELQQ8TDG4 1101 aa11.09□□□□□ -0.63
PTPN7-208ENST00000476061 OXER1Q8TDS5 423 aa11.09□□□□□ -0.63
PTPN7-208ENST00000476061 EDAQ92838 391 aa11.09□□□□□ -0.63
PTPN7-208ENST00000476061 TNFRSF25Q93038 417 aa11.09□□□□□ -0.63
PTPN7-208ENST00000476061 PGBD4Q96DM1 585 aa11.09□□□□□ -0.63
PTPN7-208ENST00000476061 CEP170P1Q96L14 293 aa11.09□□□□□ -0.63
PTPN7-208ENST00000476061 SH2D3AQ9BRG2 576 aa11.09□□□□□ -0.63
PTPN7-208ENST00000476061 S1PR5Q9H228 398 aa11.09□□□□□ -0.63
PTPN7-208ENST00000476061 ZSWIM4Q9H7M6 989 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms