RNA–Protein interactions for RNA: ENST00000475795.5

UBE4B-208, Transcript of ubiquitination factor E4B, humanhuman

TSL 5

Gene UBE4B, Length 871 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-208ENST00000475795 SNX14Q9Y5W7 946 aa8.14□□□□□ -1.11
UBE4B-208ENST00000475795 TRIOO75962 3097 aa8.13□□□□□ -1.11
UBE4B-208ENST00000475795 PER2O15055 1255 aa8.13□□□□□ -1.11
UBE4B-208ENST00000475795 MSH4O15457 936 aa8.13□□□□□ -1.11
UBE4B-208ENST00000475795 HOXA2O43364 376 aa8.13□□□□□ -1.11
UBE4B-208ENST00000475795 EDIL3O43854 480 aa8.13□□□□□ -1.11
UBE4B-208ENST00000475795 ZNF862O60290 1169 aa8.13□□□□□ -1.11
UBE4B-208ENST00000475795 ZSCAN20P17040 1043 aaPredicted RBP8.13□□□□□ -1.11
UBE4B-208ENST00000475795 IFNAR1P17181 557 aa8.13□□□□□ -1.11
UBE4B-208ENST00000475795 ATF7P17544 494 aaPredicted RBP8.13□□□□□ -1.11
UBE4B-208ENST00000475795 RPS6KB1P23443 525 aa8.13□□□□□ -1.11
UBE4B-208ENST00000475795 EIF4BP23588 611 aaKnown RBP8.13□□□□□ -1.11
UBE4B-208ENST00000475795 TMOD1P28289 359 aa8.13□□□□□ -1.11
UBE4B-208ENST00000475795 USP11P51784 963 aa8.13□□□□□ -1.11
UBE4B-208ENST00000475795 RBM10P98175 930 aaKnown RBP8.13□□□□□ -1.11
UBE4B-208ENST00000475795 PLCB3Q01970 1234 aa8.13□□□□□ -1.11
UBE4B-208ENST00000475795 PRKCEQ02156 737 aa8.13□□□□□ -1.11
UBE4B-208ENST00000475795 CBX2Q14781 532 aaPredicted RBP8.13□□□□□ -1.11
UBE4B-208ENST00000475795 TMEM184AQ6ZMB5 413 aa8.13□□□□□ -1.11
UBE4B-208ENST00000475795 LRRC43Q8N309 656 aa8.13□□□□□ -1.11
UBE4B-208ENST00000475795 LRRC71Q8N4P6 559 aa8.13□□□□□ -1.11
UBE4B-208ENST00000475795 VN1R2Q8NFZ6 395 aa8.13□□□□□ -1.11
UBE4B-208ENST00000475795 MICAL1Q8TDZ2 1067 aa8.13□□□□□ -1.11
UBE4B-208ENST00000475795 SUSD6Q92537 303 aa8.13□□□□□ -1.11
UBE4B-208ENST00000475795 MRPS27Q92552 414 aaKnown RBP8.13□□□□□ -1.11
UBE4B-208ENST00000475795 EDAQ92838 391 aa8.13□□□□□ -1.11
UBE4B-208ENST00000475795 CCDC136Q96JN2 1154 aa8.13□□□□□ -1.11
UBE4B-208ENST00000475795 MFSD14AQ96MC6 490 aa8.13□□□□□ -1.11
UBE4B-208ENST00000475795 FBXL18Q96ME1 805 aa8.13□□□□□ -1.11
UBE4B-208ENST00000475795 CASD1Q96PB1 797 aa8.13□□□□□ -1.11
UBE4B-208ENST00000475795 RIT2Q99578 217 aa8.13□□□□□ -1.11
UBE4B-208ENST00000475795 PHF7Q9BWX1 381 aaPredicted RBP8.13□□□□□ -1.11
UBE4B-208ENST00000475795 SLC26A6Q9BXS9 759 aa8.13□□□□□ -1.11
UBE4B-208ENST00000475795 TMEM117Q9H0C3 514 aa8.13□□□□□ -1.11
UBE4B-208ENST00000475795 SH3GLB2Q9NR46 395 aa8.13□□□□□ -1.11
UBE4B-208ENST00000475795 DISC1Q9NRI5 854 aa8.13□□□□□ -1.11
UBE4B-208ENST00000475795 NRBP2Q9NSY0 501 aa8.13□□□□□ -1.11
UBE4B-208ENST00000475795 VPS54Q9P1Q0 977 aa8.13□□□□□ -1.11
UBE4B-208ENST00000475795 MAP3K7O43318 606 aa8.12□□□□□ -1.11
UBE4B-208ENST00000475795 CHMP2AO43633 222 aa8.12□□□□□ -1.11
UBE4B-208ENST00000475795 GAS7O60861 476 aa8.12□□□□□ -1.11
UBE4B-208ENST00000475795 SRGAP2BP0DMP2 458 aa8.12□□□□□ -1.11
UBE4B-208ENST00000475795 DARSP14868 501 aaKnown RBP8.12□□□□□ -1.11
UBE4B-208ENST00000475795 PSMA5P28066 241 aa8.12□□□□□ -1.11
UBE4B-208ENST00000475795 SFNP31947 248 aa8.12□□□□□ -1.11
UBE4B-208ENST00000475795 PPM1AP35813 382 aa8.12□□□□□ -1.11
UBE4B-208ENST00000475795 GPC3P51654 580 aa8.12□□□□□ -1.11
UBE4B-208ENST00000475795 JAK3P52333 1124 aa8.12□□□□□ -1.11
UBE4B-208ENST00000475795 EVCP57679 992 aa8.12□□□□□ -1.11
UBE4B-208ENST00000475795 NHLH1Q02575 133 aa8.12□□□□□ -1.11
UBE4B-208ENST00000475795 KCNC3Q14003 757 aa8.12□□□□□ -1.11
UBE4B-208ENST00000475795 UGCGQ16739 394 aa8.12□□□□□ -1.11
UBE4B-208ENST00000475795 LRCH2Q5VUJ6 765 aa8.12□□□□□ -1.11
UBE4B-208ENST00000475795 PLPP4Q5VZY2 271 aa8.12□□□□□ -1.11
UBE4B-208ENST00000475795 KCNT2Q6UVM3 1135 aa8.12□□□□□ -1.11
UBE4B-208ENST00000475795 LRRC55Q6ZSA7 311 aa8.12□□□□□ -1.11
UBE4B-208ENST00000475795 BMP8AQ7Z5Y6 402 aa8.12□□□□□ -1.11
UBE4B-208ENST00000475795 ALYREFQ86V81 257 aaKnown RBP8.12□□□□□ -1.11
UBE4B-208ENST00000475795 ECHDC2Q86YB7 292 aa8.12□□□□□ -1.11
UBE4B-208ENST00000475795 ABI1Q8IZP0 508 aa8.12□□□□□ -1.11
UBE4B-208ENST00000475795 RDM1Q8NG50 284 aa8.12□□□□□ -1.11
UBE4B-208ENST00000475795 SLC5A5Q92911 643 aa8.12□□□□□ -1.11
UBE4B-208ENST00000475795 ZNF558Q96NG5 402 aa8.12□□□□□ -1.11
UBE4B-208ENST00000475795 TCF25Q9BQ70 676 aa8.12□□□□□ -1.11
UBE4B-208ENST00000475795 TEKT3Q9BXF9 490 aa8.12□□□□□ -1.11
UBE4B-208ENST00000475795 UNC45AQ9H3U1 944 aa8.12□□□□□ -1.11
UBE4B-208ENST00000475795 PUF60Q9UHX1 559 aaKnown RBP8.12□□□□□ -1.11
UBE4B-208ENST00000475795 PCDHGA10Q9Y5H3 936 aa8.12□□□□□ -1.11
UBE4B-208ENST00000475795 ARID2Q68CP9 1835 aa8.12□□□□□ -1.11
UBE4B-208ENST00000475795 CACNA1HO95180 2353 aa8.11□□□□□ -1.11
UBE4B-208ENST00000475795 A0A0U1RQF3 1178 aa8.11□□□□□ -1.11
UBE4B-208ENST00000475795 TMEM221A6NGB7 291 aa8.11□□□□□ -1.11
UBE4B-208ENST00000475795 HIDE1A8MVS5 230 aa8.11□□□□□ -1.11
UBE4B-208ENST00000475795 M0R296 226 aa8.11□□□□□ -1.11
UBE4B-208ENST00000475795 PSMD10O75832 226 aa8.11□□□□□ -1.11
UBE4B-208ENST00000475795 PDIA3P30101 505 aaKnown RBP8.11□□□□□ -1.11
UBE4B-208ENST00000475795 PBX3P40426 434 aa8.11□□□□□ -1.11
UBE4B-208ENST00000475795 TECP42680 631 aa8.11□□□□□ -1.11
UBE4B-208ENST00000475795 NLRP5P59047 1200 aa8.11□□□□□ -1.11
UBE4B-208ENST00000475795 CCT2P78371 535 aaKnown RBP8.11□□□□□ -1.11
UBE4B-208ENST00000475795 ZXDAP98168 799 aa8.11□□□□□ -1.11
UBE4B-208ENST00000475795 KRT17Q04695 432 aa8.11□□□□□ -1.11
UBE4B-208ENST00000475795 TBC1D8BQ0IIM8 1120 aa8.11□□□□□ -1.11
UBE4B-208ENST00000475795 TARBP2Q15633 366 aaKnown RBP8.11□□□□□ -1.11
UBE4B-208ENST00000475795 Q4G0T1 1027 aa8.11□□□□□ -1.11
UBE4B-208ENST00000475795 CLLU1OSQ5K130 101 aa8.11□□□□□ -1.11
UBE4B-208ENST00000475795 ANKRD54Q6NXT1 300 aa8.11□□□□□ -1.11
UBE4B-208ENST00000475795 TRIM67Q6ZTA4 783 aa8.11□□□□□ -1.11
UBE4B-208ENST00000475795 ZNF598Q86UK7 904 aaKnown RBP8.11□□□□□ -1.11
UBE4B-208ENST00000475795 TBCKQ8TEA7 893 aa8.11□□□□□ -1.11
UBE4B-208ENST00000475795 NLRP7Q8WX94 980 aa8.11□□□□□ -1.11
UBE4B-208ENST00000475795 GJA10Q969M2 543 aa8.11□□□□□ -1.11
UBE4B-208ENST00000475795 ZNF668Q96K58 619 aaPredicted RBP8.11□□□□□ -1.11
UBE4B-208ENST00000475795 RPGRIP1Q96KN7 1286 aa8.11□□□□□ -1.11
UBE4B-208ENST00000475795 SCLT1Q96NL6 688 aa8.11□□□□□ -1.11
UBE4B-208ENST00000475795 CEP89Q96ST8 783 aa8.11□□□□□ -1.11
UBE4B-208ENST00000475795 NIFKQ9BYG3 293 aaKnown RBP8.11□□□□□ -1.11
UBE4B-208ENST00000475795 C22orf23Q9BZE7 217 aa8.11□□□□□ -1.11
UBE4B-208ENST00000475795 S1PR5Q9H228 398 aa8.11□□□□□ -1.11
UBE4B-208ENST00000475795 NCOA5Q9HCD5 579 aaKnown RBP8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms