RNA–Protein interactions for RNA: ENST00000475716.5

SNX5-208, Transcript of sorting nexin 5, humanhuman

TSL 3

Gene SNX5, Length 715 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-208ENST00000475716 COL1A2P08123 1366 aa11.34□□□□□ -0.59
SNX5-208ENST00000475716 CCDC195A0A1B0GUA6 201 aa11.34□□□□□ -0.59
SNX5-208ENST00000475716 SPDYE4A6NLX3 237 aa11.34□□□□□ -0.59
SNX5-208ENST00000475716 MEIS3P2A8K0S8 358 aa11.34□□□□□ -0.59
SNX5-208ENST00000475716 DHX15O43143 795 aaKnown RBP11.34□□□□□ -0.59
SNX5-208ENST00000475716 B4GALT3O60512 393 aa11.34□□□□□ -0.59
SNX5-208ENST00000475716 LILRB3O75022 631 aa11.34□□□□□ -0.59
SNX5-208ENST00000475716 GBP2P32456 591 aaPredicted RBP11.34□□□□□ -0.59
SNX5-208ENST00000475716 POLGP54098 1239 aaPredicted RBP11.34□□□□□ -0.59
SNX5-208ENST00000475716 VARS2Q5ST30 1063 aaKnown RBP11.34□□□□□ -0.59
SNX5-208ENST00000475716 EFCAB12Q6NXP0 572 aa11.34□□□□□ -0.59
SNX5-208ENST00000475716 ZC3H14Q6PJT7 736 aaKnown RBP11.34□□□□□ -0.59
SNX5-208ENST00000475716 PPFIBP1Q86W92 1011 aa11.34□□□□□ -0.59
SNX5-208ENST00000475716 RAB11FIP4Q86YS3 637 aa11.34□□□□□ -0.59
SNX5-208ENST00000475716 CKAP2LQ8IYA6 745 aa11.34□□□□□ -0.59
SNX5-208ENST00000475716 CTCFLQ8NI51 663 aaPredicted RBP11.34□□□□□ -0.59
SNX5-208ENST00000475716 LY9Q9HBG7 655 aa11.34□□□□□ -0.59
SNX5-208ENST00000475716 DNAJB4Q9UDY4 337 aa11.34□□□□□ -0.59
SNX5-208ENST00000475716 AKT3Q9Y243 479 aa11.34□□□□□ -0.59
SNX5-208ENST00000475716 LAMA4Q16363 1823 aa11.34□□□□□ -0.59
SNX5-208ENST00000475716 MAP1BP46821 2468 aaKnown RBP11.34□□□□□ -0.59
SNX5-208ENST00000475716 CACNA1IQ9P0X4 2223 aa11.33□□□□□ -0.59
SNX5-208ENST00000475716 EVPLQ92817 2033 aa11.33□□□□□ -0.6
SNX5-208ENST00000475716 HIP1O00291 1037 aa11.33□□□□□ -0.6
SNX5-208ENST00000475716 SRFP11831 508 aa11.33□□□□□ -0.6
SNX5-208ENST00000475716 KIF5BP33176 963 aa11.33□□□□□ -0.6
SNX5-208ENST00000475716 SLC11A1P49279 550 aa11.33□□□□□ -0.6
SNX5-208ENST00000475716 HDAC1Q13547 482 aaPredicted RBP11.33□□□□□ -0.6
SNX5-208ENST00000475716 COL9A3Q14050 684 aaPredicted RBP11.33□□□□□ -0.6
SNX5-208ENST00000475716 GIT2Q14161 759 aa11.33□□□□□ -0.6
SNX5-208ENST00000475716 ST3GAL2Q16842 350 aa11.33□□□□□ -0.6
SNX5-208ENST00000475716 PHLDB3Q6NSJ2 640 aa11.33□□□□□ -0.6
SNX5-208ENST00000475716 MIS18BP1Q6P0N0 1132 aa11.33□□□□□ -0.6
SNX5-208ENST00000475716 TAS1R1Q7RTX1 841 aa11.33□□□□□ -0.6
SNX5-208ENST00000475716 ZNF280BQ86YH2 543 aa11.33□□□□□ -0.6
SNX5-208ENST00000475716 LINC01465Q8N7H1 131 aa11.33□□□□□ -0.6
SNX5-208ENST00000475716 NCOA7Q8NI08 942 aa11.33□□□□□ -0.6
SNX5-208ENST00000475716 BBXQ8WY36 941 aaPredicted RBP11.33□□□□□ -0.6
SNX5-208ENST00000475716 MAP3K14Q99558 947 aa11.33□□□□□ -0.6
SNX5-208ENST00000475716 LZTS2Q9BRK4 669 aa11.33□□□□□ -0.6
SNX5-208ENST00000475716 RPP25Q9BUL9 199 aaKnown RBP11.33□□□□□ -0.6
SNX5-208ENST00000475716 GBP3Q9H0R5 595 aa11.33□□□□□ -0.6
SNX5-208ENST00000475716 OSBPL3Q9H4L5 887 aa11.33□□□□□ -0.6
SNX5-208ENST00000475716 WDR6Q9NNW5 1121 aaKnown RBP11.33□□□□□ -0.6
SNX5-208ENST00000475716 TBC1D13Q9NVG8 400 aa11.33□□□□□ -0.6
SNX5-208ENST00000475716 MAFBQ9Y5Q3 323 aaPredicted RBP11.33□□□□□ -0.6
SNX5-208ENST00000475716 KINO60870 393 aaKnown RBP11.32□□□□□ -0.6
SNX5-208ENST00000475716 OFD1O75665 1012 aa11.32□□□□□ -0.6
SNX5-208ENST00000475716 RFPL2O75678 378 aa11.32□□□□□ -0.6
SNX5-208ENST00000475716 SPATA31D3P0C874 917 aa11.32□□□□□ -0.6
SNX5-208ENST00000475716 DARSP14868 501 aaKnown RBP11.32□□□□□ -0.6
SNX5-208ENST00000475716 AFF1P51825 1210 aaKnown RBP11.32□□□□□ -0.6
SNX5-208ENST00000475716 SART3Q15020 963 aaKnown RBP11.32□□□□□ -0.6
SNX5-208ENST00000475716 KIAA0319Q5VV43 1072 aa11.32□□□□□ -0.6
SNX5-208ENST00000475716 TYW1BQ6NUM6 668 aa11.32□□□□□ -0.6
SNX5-208ENST00000475716 DCLRE1AQ6PJP8 1040 aa11.32□□□□□ -0.6
SNX5-208ENST00000475716 C15orf39Q6ZRI6 1047 aa11.32□□□□□ -0.6
SNX5-208ENST00000475716 SPATA31D4Q6ZUB0 917 aa11.32□□□□□ -0.6
SNX5-208ENST00000475716 HEATR3Q7Z4Q2 680 aa11.32□□□□□ -0.6
SNX5-208ENST00000475716 RALYLQ86SE5 291 aaKnown RBP11.32□□□□□ -0.6
SNX5-208ENST00000475716 MB21D2Q8IYB1 491 aaPredicted RBP11.32□□□□□ -0.6
SNX5-208ENST00000475716 EMILIN2Q9BXX0 1053 aa11.32□□□□□ -0.6
SNX5-208ENST00000475716 MRPL9Q9BYD2 267 aaKnown RBP11.32□□□□□ -0.6
SNX5-208ENST00000475716 MAN1C1Q9NR34 630 aa11.32□□□□□ -0.6
SNX5-208ENST00000475716 ARHGEF3Q9NR81 526 aa11.32□□□□□ -0.6
SNX5-208ENST00000475716 NCDNQ9UBB6 729 aa11.32□□□□□ -0.6
SNX5-208ENST00000475716 EPS15L1Q9UBC2 864 aa11.32□□□□□ -0.6
SNX5-208ENST00000475716 INPP5FQ9Y2H2 1132 aa11.32□□□□□ -0.6
SNX5-208ENST00000475716 MTF2Q9Y483 593 aaPredicted RBP11.32□□□□□ -0.6
SNX5-208ENST00000475716 USP24Q9UPU5 2620 aa11.31□□□□□ -0.6
SNX5-208ENST00000475716 FAM86B1E9PN63 330 aa11.31□□□□□ -0.6
SNX5-208ENST00000475716 C2CD2LO14523 706 aa11.31□□□□□ -0.6
SNX5-208ENST00000475716 DDAH1O94760 285 aa11.31□□□□□ -0.6
SNX5-208ENST00000475716 DDHD2O94830 711 aa11.31□□□□□ -0.6
SNX5-208ENST00000475716 FAM86B2P0C5J1 330 aa11.31□□□□□ -0.6
SNX5-208ENST00000475716 TGM1P22735 817 aa11.31□□□□□ -0.6
SNX5-208ENST00000475716 ZNF76P36508 570 aa11.31□□□□□ -0.6
SNX5-208ENST00000475716 PHKA2P46019 1235 aa11.31□□□□□ -0.6
SNX5-208ENST00000475716 GNAQP50148 359 aa11.31□□□□□ -0.6
SNX5-208ENST00000475716 GPC3P51654 580 aa11.31□□□□□ -0.6
SNX5-208ENST00000475716 GPC5P78333 572 aa11.31□□□□□ -0.6
SNX5-208ENST00000475716 NONOQ15233 471 aaKnown RBP eCLIP11.31□□□□□ -0.6
SNX5-208ENST00000475716 NOMO2Q5JPE7 1267 aa11.31□□□□□ -0.6
SNX5-208ENST00000475716 CHD1LQ86WJ1 897 aa11.31□□□□□ -0.6
SNX5-208ENST00000475716 CMASQ8NFW8 434 aaPredicted RBP11.31□□□□□ -0.6
SNX5-208ENST00000475716 PJA1Q8NG27 643 aa11.31□□□□□ -0.6
SNX5-208ENST00000475716 GABBR1Q9UBS5 961 aa11.31□□□□□ -0.6
SNX5-208ENST00000475716 INPPL1O15357 1258 aa11.3□□□□□ -0.6
SNX5-208ENST00000475716 MAGEB2O15479 319 aa11.3□□□□□ -0.6
SNX5-208ENST00000475716 LAMP2P13473 410 aa11.3□□□□□ -0.6
SNX5-208ENST00000475716 STARD6P59095 220 aa11.3□□□□□ -0.6
SNX5-208ENST00000475716 CSTF1Q05048 431 aaKnown RBP11.3□□□□□ -0.6
SNX5-208ENST00000475716 RNASELQ05823 741 aaKnown RBP11.3□□□□□ -0.6
SNX5-208ENST00000475716 DRP2Q13474 957 aa11.3□□□□□ -0.6
SNX5-208ENST00000475716 SNW1Q13573 536 aaKnown RBP11.3□□□□□ -0.6
SNX5-208ENST00000475716 WWC2Q6AWC2 1192 aa11.3□□□□□ -0.6
SNX5-208ENST00000475716 PLA2G4DQ86XP0 818 aa11.3□□□□□ -0.6
SNX5-208ENST00000475716 ZNF707Q96C28 371 aaPredicted RBP11.3□□□□□ -0.6
SNX5-208ENST00000475716 CHAMP1Q96JM3 812 aa11.3□□□□□ -0.6
SNX5-208ENST00000475716 MAP7D2Q96T17 732 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms