RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 SEC24BO95487 1268 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 EOMESO95936 686 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 ALADP13716 330 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 ZSCAN20P17040 1043 aaPredicted RBP7.89□□□□□ -1.15
HDAC3-207ENST00000475549 NDUFV1P49821 464 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 AFF1P51825 1210 aaKnown RBP7.89□□□□□ -1.15
HDAC3-207ENST00000475549 PSMC5P62195 406 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 ST3GAL1Q11201 340 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 NR5A1Q13285 461 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 PPP2R5CQ13362 524 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 ME3Q16798 604 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 LONRF3Q496Y0 759 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 SPOUT1Q5T280 376 aaKnown RBP7.89□□□□□ -1.15
HDAC3-207ENST00000475549 SYCE2Q6PIF2 218 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 TMEM184AQ6ZMB5 413 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 PIK3AP1Q6ZUJ8 805 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 NEK8Q86SG6 692 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 RHPN2Q8IUC4 686 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 RNF135Q8IUD6 432 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 THNSL1Q8IYQ7 743 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 FAM177A1Q8N128 213 aaPredicted RBP7.89□□□□□ -1.15
HDAC3-207ENST00000475549 ZNF710Q8N1W2 664 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 NECAB1Q8N987 351 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 RNF169Q8NCN4 708 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 FEZF2Q8TBJ5 459 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 HELQQ8TDG4 1101 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 PRPF31Q8WWY3 499 aaKnown RBP7.89□□□□□ -1.15
HDAC3-207ENST00000475549 NLRP7Q8WX94 980 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 SUSD6Q92537 303 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 MRPS27Q92552 414 aaKnown RBP7.89□□□□□ -1.15
HDAC3-207ENST00000475549 LPPQ93052 612 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 TCF25Q9BQ70 676 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 TRAIPQ9BWF2 469 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 GCOM2Q9BZD3 368 aaPredicted RBP7.89□□□□□ -1.15
HDAC3-207ENST00000475549 SLKQ9H2G2 1235 aaPredicted RBP7.89□□□□□ -1.15
HDAC3-207ENST00000475549 MINDY3Q9H8M7 445 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 CYP26B1Q9NR63 512 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 CHST12Q9NRB3 414 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 AAASQ9NRG9 546 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 RGL1Q9NZL6 768 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 TCEAL9Q9UHQ7 104 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 CDH22Q9UJ99 828 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 LZTS1Q9Y250 596 aa7.89□□□□□ -1.15
HDAC3-207ENST00000475549 USP15Q9Y4E8 981 aaPredicted RBP7.89□□□□□ -1.15
HDAC3-207ENST00000475549 ARIH1Q9Y4X5 557 aaPredicted RBP7.89□□□□□ -1.15
HDAC3-207ENST00000475549 STK36Q9NRP7 1315 aa7.88□□□□□ -1.15
HDAC3-207ENST00000475549 C2orf71A6NGG8 1288 aa7.88□□□□□ -1.15
HDAC3-207ENST00000475549 LOC730098B7Z3J9 87 aa7.88□□□□□ -1.15
HDAC3-207ENST00000475549 NT5C1B-RDH14C9J2C7 533 aa7.88□□□□□ -1.15
HDAC3-207ENST00000475549 CCNT1O60563 726 aaKnown RBP7.88□□□□□ -1.15
HDAC3-207ENST00000475549 SLITRK3O94933 977 aa7.88□□□□□ -1.15
HDAC3-207ENST00000475549 LAG3P18627 525 aa7.88□□□□□ -1.15
HDAC3-207ENST00000475549 HOXA11P31270 313 aaPredicted RBP7.88□□□□□ -1.15
HDAC3-207ENST00000475549 PHKA2P46019 1235 aa7.88□□□□□ -1.15
HDAC3-207ENST00000475549 QARSP47897 775 aaKnown RBP7.88□□□□□ -1.15
HDAC3-207ENST00000475549 CBX2Q14781 532 aaPredicted RBP7.88□□□□□ -1.15
HDAC3-207ENST00000475549 HERC4Q5GLZ8 1057 aaPredicted RBP7.88□□□□□ -1.15
HDAC3-207ENST00000475549 HFE2Q6ZVN8 426 aa7.88□□□□□ -1.15
HDAC3-207ENST00000475549 SLC39A11Q8N1S5 342 aa7.88□□□□□ -1.15
HDAC3-207ENST00000475549 MRPL43Q8N983 215 aaKnown RBP7.88□□□□□ -1.15
HDAC3-207ENST00000475549 BCL7CQ8WUZ0 217 aaPredicted RBP7.88□□□□□ -1.15
HDAC3-207ENST00000475549 TMEM143Q96AN5 459 aa7.88□□□□□ -1.15
HDAC3-207ENST00000475549 FAM20AQ96MK3 541 aa7.88□□□□□ -1.15
HDAC3-207ENST00000475549 HSD17B14Q9BPX1 270 aa7.88□□□□□ -1.15
HDAC3-207ENST00000475549 VN1R3Q9BXE9 311 aa7.88□□□□□ -1.15
HDAC3-207ENST00000475549 DHX33Q9H6R0 707 aaKnown RBP7.88□□□□□ -1.15
HDAC3-207ENST00000475549 FAM50BQ9Y247 325 aa7.88□□□□□ -1.15
HDAC3-207ENST00000475549 A0A087WWV3 80 aa7.87□□□□□ -1.15
HDAC3-207ENST00000475549 CCDC194A0A1B0GVG4 234 aa7.87□□□□□ -1.15
HDAC3-207ENST00000475549 BTBD18B2RXH4 712 aa7.87□□□□□ -1.15
HDAC3-207ENST00000475549 TBX3O15119 743 aa7.87□□□□□ -1.15
HDAC3-207ENST00000475549 HOXA2O43364 376 aa7.87□□□□□ -1.15
HDAC3-207ENST00000475549 JAK2O60674 1132 aa7.87□□□□□ -1.15
HDAC3-207ENST00000475549 ZNF623O75123 536 aa7.87□□□□□ -1.15
HDAC3-207ENST00000475549 OFD1O75665 1012 aa7.87□□□□□ -1.15
HDAC3-207ENST00000475549 P4HBP07237 508 aaKnown RBP7.87□□□□□ -1.15
HDAC3-207ENST00000475549 SRGAP2CP0DJJ0 459 aa7.87□□□□□ -1.15
HDAC3-207ENST00000475549 YWHABP31946 246 aaKnown RBP7.87□□□□□ -1.15
HDAC3-207ENST00000475549 VASPP50552 380 aaPredicted RBP7.87□□□□□ -1.15
HDAC3-207ENST00000475549 BCAR1P56945 870 aa7.87□□□□□ -1.15
HDAC3-207ENST00000475549 ANAPC15P60006 121 aa7.87□□□□□ -1.15
HDAC3-207ENST00000475549 CDC42EP1Q00587 391 aa7.87□□□□□ -1.15
HDAC3-207ENST00000475549 CTTNQ14247 550 aaKnown RBP7.87□□□□□ -1.15
HDAC3-207ENST00000475549 CSPP1Q1MSJ5 1256 aa7.87□□□□□ -1.15
HDAC3-207ENST00000475549 UBXN11Q5T124 520 aa7.87□□□□□ -1.15
HDAC3-207ENST00000475549 PLPP4Q5VZY2 271 aa7.87□□□□□ -1.15
HDAC3-207ENST00000475549 PDE12Q6L8Q7 609 aaKnown RBP7.87□□□□□ -1.15
HDAC3-207ENST00000475549 ANKRD54Q6NXT1 300 aa7.87□□□□□ -1.15
HDAC3-207ENST00000475549 KANK3Q6NY19 840 aa7.87□□□□□ -1.15
HDAC3-207ENST00000475549 LLGL2Q6P1M3 1020 aa7.87□□□□□ -1.15
HDAC3-207ENST00000475549 CPLX2Q6PUV4 134 aaKnown RBP7.87□□□□□ -1.15
HDAC3-207ENST00000475549 AGMOQ6ZNB7 445 aa7.87□□□□□ -1.15
HDAC3-207ENST00000475549 ZNF410Q86VK4 478 aa7.87□□□□□ -1.15
HDAC3-207ENST00000475549 ZNF280BQ86YH2 543 aa7.87□□□□□ -1.15
HDAC3-207ENST00000475549 C4orf19Q8IY42 314 aa7.87□□□□□ -1.15
HDAC3-207ENST00000475549 LRRC43Q8N309 656 aa7.87□□□□□ -1.15
HDAC3-207ENST00000475549 PPP2R3CQ969Q6 453 aa7.87□□□□□ -1.15
HDAC3-207ENST00000475549 FAM122AQ96E09 287 aa7.87□□□□□ -1.15
HDAC3-207ENST00000475549 CEP170P1Q96L14 293 aa7.87□□□□□ -1.15
HDAC3-207ENST00000475549 NLRP4Q96MN2 994 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms