RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 NUP85Q9BW27 656 aa11.71□□□□□ -0.54
VAPB-204ENST00000475243 CNOT10Q9H9A5 744 aaKnown RBP11.71□□□□□ -0.54
VAPB-204ENST00000475243 ANKARQ7Z5J8 1434 aa11.71□□□□□ -0.54
VAPB-204ENST00000475243 PP2D1A8MPX8 630 aa11.71□□□□□ -0.54
VAPB-204ENST00000475243 PFDN1O60925 122 aa11.71□□□□□ -0.54
VAPB-204ENST00000475243 PHKA2P46019 1235 aa11.71□□□□□ -0.54
VAPB-204ENST00000475243 GPC5P78333 572 aa11.71□□□□□ -0.54
VAPB-204ENST00000475243 TXNRD1Q16881 649 aa11.71□□□□□ -0.54
VAPB-204ENST00000475243 SLC10A5Q5PT55 438 aa11.71□□□□□ -0.54
VAPB-204ENST00000475243 FAM47EQ6ZV65 393 aa11.71□□□□□ -0.54
VAPB-204ENST00000475243 KDELC2Q7Z4H8 507 aa11.71□□□□□ -0.54
VAPB-204ENST00000475243 RHOT2Q8IXI1 618 aa11.71□□□□□ -0.54
VAPB-204ENST00000475243 MMP19Q99542 508 aa11.71□□□□□ -0.54
VAPB-204ENST00000475243 RNF14Q9UBS8 474 aa11.71□□□□□ -0.54
VAPB-204ENST00000475243 HNRNPCL2B2RXH8 293 aa11.71□□□□□ -0.54
VAPB-204ENST00000475243 HNRNPCL1O60812 293 aaKnown RBP11.71□□□□□ -0.54
VAPB-204ENST00000475243 COASYQ13057 564 aa11.71□□□□□ -0.54
VAPB-204ENST00000475243 NDUFAF2Q8N183 169 aa11.71□□□□□ -0.54
VAPB-204ENST00000475243 LRRC53A6NM62 1247 aa11.7□□□□□ -0.54
VAPB-204ENST00000475243 TAC1P20366 129 aa11.7□□□□□ -0.54
VAPB-204ENST00000475243 TSPY1Q01534 308 aa11.7□□□□□ -0.54
VAPB-204ENST00000475243 TAF11Q15544 211 aa11.7□□□□□ -0.54
VAPB-204ENST00000475243 ALS2CLQ60I27 953 aa11.7□□□□□ -0.54
VAPB-204ENST00000475243 C11orf70Q9BRQ4 267 aa11.7□□□□□ -0.54
VAPB-204ENST00000475243 EDEM3Q9BZQ6 932 aa11.7□□□□□ -0.54
VAPB-204ENST00000475243 FAM217BQ9NTX9 383 aaPredicted RBP11.7□□□□□ -0.54
VAPB-204ENST00000475243 GNA15P30679 374 aa11.7□□□□□ -0.54
VAPB-204ENST00000475243 EPM2AIP1Q7L775 607 aaPredicted RBP11.7□□□□□ -0.54
VAPB-204ENST00000475243 GIMAP8Q8ND71 665 aaPredicted RBP11.7□□□□□ -0.54
VAPB-204ENST00000475243 ATXN7L3BQ96GX2 97 aa11.7□□□□□ -0.54
VAPB-204ENST00000475243 SPATA33Q96N06 139 aa11.7□□□□□ -0.54
VAPB-204ENST00000475243 SERPINI1Q99574 410 aa11.7□□□□□ -0.54
VAPB-204ENST00000475243 SUFUQ9UMX1 484 aa11.7□□□□□ -0.54
VAPB-204ENST00000475243 ADORA2BP29275 332 aa11.7□□□□□ -0.54
VAPB-204ENST00000475243 ADCY2Q08462 1091 aa11.7□□□□□ -0.54
VAPB-204ENST00000475243 VPS39Q96JC1 886 aa11.7□□□□□ -0.54
VAPB-204ENST00000475243 GOLPH3LQ9H4A5 285 aa11.7□□□□□ -0.54
VAPB-204ENST00000475243 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.7□□□□□ -0.54
VAPB-204ENST00000475243 MOCS2O96007 188 aaPredicted RBP11.7□□□□□ -0.54
VAPB-204ENST00000475243 HIBCHQ6NVY1 386 aaPredicted RBP11.7□□□□□ -0.54
VAPB-204ENST00000475243 SMIM5Q71RC9 77 aa11.7□□□□□ -0.54
VAPB-204ENST00000475243 TRMT2AQ8IZ69 625 aaKnown RBP11.7□□□□□ -0.54
VAPB-204ENST00000475243 BEST2Q8NFU1 509 aa11.7□□□□□ -0.54
VAPB-204ENST00000475243 M0QYV0 167 aa11.7□□□□□ -0.54
VAPB-204ENST00000475243 ANP32DO95626 131 aa11.7□□□□□ -0.54
VAPB-204ENST00000475243 RAD54LQ92698 747 aa11.7□□□□□ -0.54
VAPB-204ENST00000475243 TOPORSQ9NS56 1045 aaPredicted RBP11.7□□□□□ -0.54
VAPB-204ENST00000475243 ASNSD1Q9NWL6 643 aa11.7□□□□□ -0.54
VAPB-204ENST00000475243 SCHIP1Q9P0W5 487 aaPredicted RBP11.7□□□□□ -0.54
VAPB-204ENST00000475243 E5RI56 91 aa11.7□□□□□ -0.54
VAPB-204ENST00000475243 URGCPQ8TCY9 931 aa11.7□□□□□ -0.54
VAPB-204ENST00000475243 BRIP1Q9BX63 1249 aa11.7□□□□□ -0.54
VAPB-204ENST00000475243 PIDD1Q9HB75 910 aa11.7□□□□□ -0.54
VAPB-204ENST00000475243 LY9Q9HBG7 655 aa11.7□□□□□ -0.54
VAPB-204ENST00000475243 RNF146Q9NTX7 359 aa11.7□□□□□ -0.54
VAPB-204ENST00000475243 PODXLO00592 558 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 GPS1Q13098 491 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 SPARCL1Q14515 664 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 KIAA1755Q5JYT7 1200 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 SYCP2LQ5T4T6 812 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 DGKHQ86XP1 1220 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 TMEM35BQ8NCS4 154 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 PPP1R36Q96LQ0 422 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 NCK2O43639 380 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 LCP1P13796 627 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 HSP90AA5PQ58FG0 334 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 SRRM1Q8IYB3 904 aaKnown RBP11.69□□□□□ -0.54
VAPB-204ENST00000475243 MCPH1Q8NEM0 835 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 N4BP2L2Q92802 583 aaPredicted RBP11.69□□□□□ -0.54
VAPB-204ENST00000475243 SH2D3AQ9BRG2 576 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 PLEKHG1Q9ULL1 1385 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 ERVK-7P63135 1459 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 CLASP1Q7Z460 1538 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 CPDO75976 1380 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 H7C1W4 665 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 FTLP02792 175 aaPredicted RBP11.69□□□□□ -0.54
VAPB-204ENST00000475243 AP3B2Q13367 1082 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 LRRC31Q6UY01 552 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 ABTB1Q969K4 478 aaPredicted RBP11.69□□□□□ -0.54
VAPB-204ENST00000475243 UTYO14607 1347 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 MMEP08473 750 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 PSMC1P62191 440 aaKnown RBP11.69□□□□□ -0.54
VAPB-204ENST00000475243 TBC1D1Q86TI0 1168 aaPredicted RBP11.69□□□□□ -0.54
VAPB-204ENST00000475243 AGR3Q8TD06 166 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 SPON2Q9BUD6 331 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 POLR3CQ9BUI4 534 aaPredicted RBP11.69□□□□□ -0.54
VAPB-204ENST00000475243 DCTN4Q9UJW0 460 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 CCDC151A5D8V7 595 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 F5H6K3 240 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 E2F6O75461 281 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 HSPA8P11142 646 aaKnown RBP11.69□□□□□ -0.54
VAPB-204ENST00000475243 EEF1DP29692 281 aaKnown RBP11.69□□□□□ -0.54
VAPB-204ENST00000475243 POLE2P56282 527 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 KLRC3Q07444 240 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 CUL1Q13616 776 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 KNOP1Q1ED39 458 aaKnown RBP11.69□□□□□ -0.54
VAPB-204ENST00000475243 RCSD1Q6JBY9 416 aa11.69□□□□□ -0.54
VAPB-204ENST00000475243 POLR3FQ9H1D9 316 aaPredicted RBP11.69□□□□□ -0.54
VAPB-204ENST00000475243 UPF3AQ9H1J1 476 aaKnown RBP11.69□□□□□ -0.54
VAPB-204ENST00000475243 ITM2BQ9Y287 266 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms