RNA–Protein interactions for RNA: ENST00000475208.5

TMEM54-205, Transcript of transmembrane protein 54, humanhuman

TSL 1 (best)

Gene TMEM54, Length 768 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54-205ENST00000475208 SP100P23497 879 aaPredicted RBP28.03■■■□□ 2.08
TMEM54-205ENST00000475208 PTPN21Q16825 1174 aa28.03■■■□□ 2.08
TMEM54-205ENST00000475208 Q4G0T1 1027 aa28.03■■■□□ 2.08
TMEM54-205ENST00000475208 XKR3Q5GH77 459 aa28.03■■■□□ 2.08
TMEM54-205ENST00000475208 TRIM22Q8IYM9 498 aa28.03■■■□□ 2.08
TMEM54-205ENST00000475208 FBXL6Q8N531 539 aa28.03■■■□□ 2.08
TMEM54-205ENST00000475208 NIFKQ9BYG3 293 aaKnown RBP28.03■■■□□ 2.08
TMEM54-205ENST00000475208 C22orf23Q9BZE7 217 aa28.03■■■□□ 2.08
TMEM54-205ENST00000475208 PCDHA4Q9UN74 947 aa28.03■■■□□ 2.08
TMEM54-205ENST00000475208 HCFC2Q9Y5Z7 792 aa28.03■■■□□ 2.08
TMEM54-205ENST00000475208 MRPL43Q8N983 215 aaKnown RBP28.02■■■□□ 2.08
TMEM54-205ENST00000475208 ASIC4Q96FT7 647 aa28.02■■■□□ 2.08
TMEM54-205ENST00000475208 CEP89Q96ST8 783 aa28.02■■■□□ 2.08
TMEM54-205ENST00000475208 SH2D3AQ9BRG2 576 aa28.02■■■□□ 2.08
TMEM54-205ENST00000475208 CDH22Q9UJ99 828 aa28.02■■■□□ 2.08
TMEM54-205ENST00000475208 C2orf71A6NGG8 1288 aa28.01■■■□□ 2.07
TMEM54-205ENST00000475208 NT5C1B-RDH14C9J2C7 533 aa28.01■■■□□ 2.07
TMEM54-205ENST00000475208 STBD1O95210 358 aa28.01■■■□□ 2.07
TMEM54-205ENST00000475208 CA8P35219 290 aa28.01■■■□□ 2.07
TMEM54-205ENST00000475208 PTPN5P54829 565 aa28.01■■■□□ 2.07
TMEM54-205ENST00000475208 BCAR1P56945 870 aa28.01■■■□□ 2.07
TMEM54-205ENST00000475208 TPRNQ4KMQ1 711 aa28.01■■■□□ 2.07
TMEM54-205ENST00000475208 B3GNT9Q6UX72 402 aa28.01■■■□□ 2.07
TMEM54-205ENST00000475208 CHST12Q9NRB3 414 aa28.01■■■□□ 2.07
TMEM54-205ENST00000475208 ZDBF2Q9HCK1 2354 aa28.01■■■□□ 2.07
TMEM54-205ENST00000475208 KMT2EQ8IZD2 1858 aa28■■■□□ 2.07
TMEM54-205ENST00000475208 A0A087WZ62 844 aa28■■■□□ 2.07
TMEM54-205ENST00000475208 REC8O95072 547 aa28■■■□□ 2.07
TMEM54-205ENST00000475208 SFPQP23246 707 aaKnown RBP eCLIP28■■■□□ 2.07
TMEM54-205ENST00000475208 ALDH7A1P49419 539 aaKnown RBP28■■■□□ 2.07
TMEM54-205ENST00000475208 DNM2P50570 870 aa28■■■□□ 2.07
TMEM54-205ENST00000475208 CDC42EP1Q00587 391 aa28■■■□□ 2.07
TMEM54-205ENST00000475208 SSRP1Q08945 709 aaKnown RBP28■■■□□ 2.07
TMEM54-205ENST00000475208 ZBTB33Q86T24 672 aa28■■■□□ 2.07
TMEM54-205ENST00000475208 TMEM169Q96HH4 297 aa28■■■□□ 2.07
TMEM54-205ENST00000475208 PHOX2BQ99453 314 aa28■■■□□ 2.07
TMEM54-205ENST00000475208 PRRX2Q99811 253 aa28■■■□□ 2.07
TMEM54-205ENST00000475208 FDXACB1Q9BRP7 624 aaPredicted RBP28■■■□□ 2.07
TMEM54-205ENST00000475208 TSHZ2Q9NRE2 1034 aa28■■■□□ 2.07
TMEM54-205ENST00000475208 CYP3A7-CYP3A51PA0A087WV96 503 aa27.99■■■□□ 2.07
TMEM54-205ENST00000475208 IGKV6-21A0A0C4DH24 114 aa27.99■■■□□ 2.07
TMEM54-205ENST00000475208 CLASP2O75122 1294 aaKnown RBP27.99■■■□□ 2.07
TMEM54-205ENST00000475208 CYP3A7P24462 503 aa27.99■■■□□ 2.07
TMEM54-205ENST00000475208 PHKA2P46019 1235 aa27.99■■■□□ 2.07
TMEM54-205ENST00000475208 TOB2Q14106 344 aaPredicted RBP27.99■■■□□ 2.07
TMEM54-205ENST00000475208 TWF2Q6IBS0 349 aaKnown RBP27.99■■■□□ 2.07
TMEM54-205ENST00000475208 BLIDQ8IZY5 108 aa27.99■■■□□ 2.07
TMEM54-205ENST00000475208 ETNPPLQ8TBG4 499 aa27.99■■■□□ 2.07
TMEM54-205ENST00000475208 PIN4Q9Y237 131 aaKnown RBP27.99■■■□□ 2.07
TMEM54-205ENST00000475208 NR2E1Q9Y466 385 aa27.99■■■□□ 2.07
TMEM54-205ENST00000475208 M0R2N6 131 aa27.98■■■□□ 2.07
TMEM54-205ENST00000475208 ZC3H11AO75152 810 aaKnown RBP eCLIP27.98■■■□□ 2.07
TMEM54-205ENST00000475208 BMS1Q14692 1282 aaKnown RBP27.98■■■□□ 2.07
TMEM54-205ENST00000475208 CES5AQ6NT32 575 aa27.98■■■□□ 2.07
TMEM54-205ENST00000475208 RUFY3Q7L099 469 aa27.98■■■□□ 2.07
TMEM54-205ENST00000475208 ZNF410Q86VK4 478 aa27.98■■■□□ 2.07
TMEM54-205ENST00000475208 RHPN2Q8IUC4 686 aa27.98■■■□□ 2.07
TMEM54-205ENST00000475208 LPPQ93052 612 aa27.98■■■□□ 2.07
TMEM54-205ENST00000475208 TRAIPQ9BWF2 469 aa27.98■■■□□ 2.07
TMEM54-205ENST00000475208 ADAM7Q9H2U9 754 aa27.98■■■□□ 2.07
TMEM54-205ENST00000475208 SUCLA2Q9P2R7 463 aaPredicted RBP27.98■■■□□ 2.07
TMEM54-205ENST00000475208 DDX11L8A8MPP1 907 aa27.97■■■□□ 2.07
TMEM54-205ENST00000475208 DEXIO95424 95 aa27.97■■■□□ 2.07
TMEM54-205ENST00000475208 VCPP55072 806 aaKnown RBP27.97■■■□□ 2.07
TMEM54-205ENST00000475208 LONRF3Q496Y0 759 aa27.97■■■□□ 2.07
TMEM54-205ENST00000475208 TMEM173Q86WV6 379 aaPredicted RBP27.97■■■□□ 2.07
TMEM54-205ENST00000475208 DAGLBQ8NCG7 672 aa27.97■■■□□ 2.07
TMEM54-205ENST00000475208 RSPH1Q8WYR4 309 aa27.97■■■□□ 2.07
TMEM54-205ENST00000475208 MBOAT7Q96N66 472 aa27.97■■■□□ 2.07
TMEM54-205ENST00000475208 NECTIN4Q96NY8 510 aa27.97■■■□□ 2.07
TMEM54-205ENST00000475208 INO80BQ9C086 356 aaPredicted RBP27.97■■■□□ 2.07
TMEM54-205ENST00000475208 ZBP1Q9H171 429 aa27.97■■■□□ 2.07
TMEM54-205ENST00000475208 POMKQ9H5K3 350 aa27.97■■■□□ 2.07
TMEM54-205ENST00000475208 CPLX1O14810 134 aa27.96■■■□□ 2.07
TMEM54-205ENST00000475208 CXCL14O95715 111 aa27.96■■■□□ 2.07
TMEM54-205ENST00000475208 SKIP12755 728 aa27.96■■■□□ 2.07
TMEM54-205ENST00000475208 ITIH3Q06033 890 aa27.96■■■□□ 2.07
TMEM54-205ENST00000475208 TCF15Q12870 199 aa27.96■■■□□ 2.07
TMEM54-205ENST00000475208 NPY5RQ15761 445 aa27.96■■■□□ 2.07
TMEM54-205ENST00000475208 MOXD1Q6UVY6 613 aa27.96■■■□□ 2.07
TMEM54-205ENST00000475208 VPS52Q8N1B4 723 aa27.96■■■□□ 2.07
TMEM54-205ENST00000475208 NLRP4Q96MN2 994 aa27.96■■■□□ 2.07
TMEM54-205ENST00000475208 ZSWIM6Q9HCJ5 1215 aa27.96■■■□□ 2.07
TMEM54-205ENST00000475208 FAM105AQ9NUU6 356 aa27.96■■■□□ 2.07
TMEM54-205ENST00000475208 DDX25Q9UHL0 483 aaKnown RBP27.96■■■□□ 2.07
TMEM54-205ENST00000475208 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP27.95■■■□□ 2.06
TMEM54-205ENST00000475208 MAFO75444 373 aaPredicted RBP27.95■■■□□ 2.06
TMEM54-205ENST00000475208 NONOQ15233 471 aaKnown RBP eCLIP27.95■■■□□ 2.06
TMEM54-205ENST00000475208 PLA2G4FQ68DD2 849 aa27.95■■■□□ 2.06
TMEM54-205ENST00000475208 GLB1LQ6UWU2 654 aa27.95■■■□□ 2.06
TMEM54-205ENST00000475208 ANO5Q75V66 913 aa27.95■■■□□ 2.06
TMEM54-205ENST00000475208 CATSPER4Q7RTX7 472 aa27.95■■■□□ 2.06
TMEM54-205ENST00000475208 KSR1Q8IVT5 923 aa27.95■■■□□ 2.06
TMEM54-205ENST00000475208 AUTS2Q8WXX7 1259 aa27.95■■■□□ 2.06
TMEM54-205ENST00000475208 AIFM3Q96NN9 605 aa27.95■■■□□ 2.06
TMEM54-205ENST00000475208 TBC1D13Q9NVG8 400 aa27.95■■■□□ 2.06
TMEM54-205ENST00000475208 INPP5FQ9Y2H2 1132 aa27.95■■■□□ 2.06
TMEM54-205ENST00000475208 MEIS3P2A8K0S8 358 aa27.94■■■□□ 2.06
TMEM54-205ENST00000475208 C2CD4DB7Z1M9 353 aa27.94■■■□□ 2.06
TMEM54-205ENST00000475208 PSMC5P62195 406 aa27.94■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms