RNA–Protein interactions for RNA: ENST00000475043.5

PDPN-204, Transcript of podoplanin, humanhuman

TSL 3 BASIC

Gene PDPN, Length 849 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPN-204ENST00000475043 SLC24A5Q71RS6 500 aa10.56□□□□□ -0.72
PDPN-204ENST00000475043 RHPN2Q8IUC4 686 aa10.56□□□□□ -0.72
PDPN-204ENST00000475043 CMTR2Q8IYT2 770 aaKnown RBP10.56□□□□□ -0.72
PDPN-204ENST00000475043 CRIPAKQ8N1N5 446 aa10.56□□□□□ -0.72
PDPN-204ENST00000475043 FAM184AQ8NB25 1140 aa10.56□□□□□ -0.72
PDPN-204ENST00000475043 CEP170P1Q96L14 293 aa10.56□□□□□ -0.72
PDPN-204ENST00000475043 KIF2CQ99661 725 aa10.56□□□□□ -0.72
PDPN-204ENST00000475043 LXNQ9BS40 222 aa10.56□□□□□ -0.72
PDPN-204ENST00000475043 C11orf84Q9BUA3 381 aaPredicted RBP10.56□□□□□ -0.72
PDPN-204ENST00000475043 ADAMTS10Q9H324 1103 aa10.56□□□□□ -0.72
PDPN-204ENST00000475043 SUCLA2Q9P2R7 463 aaPredicted RBP10.56□□□□□ -0.72
PDPN-204ENST00000475043 PCDHA12Q9UN75 941 aa10.56□□□□□ -0.72
PDPN-204ENST00000475043 MRPL42Q9Y6G3 142 aaKnown RBP10.56□□□□□ -0.72
PDPN-204ENST00000475043 A0A0C4DFX4 3053 aa10.55□□□□□ -0.72
PDPN-204ENST00000475043 ATG2AQ2TAZ0 1938 aa10.55□□□□□ -0.72
PDPN-204ENST00000475043 TBKBP1A7MCY6 615 aa10.55□□□□□ -0.72
PDPN-204ENST00000475043 C9IYK1 514 aa10.55□□□□□ -0.72
PDPN-204ENST00000475043 C5orf67F2Z3F1 127 aa10.55□□□□□ -0.72
PDPN-204ENST00000475043 NEMFO60524 1076 aa10.55□□□□□ -0.72
PDPN-204ENST00000475043 MAFO75444 373 aaPredicted RBP10.55□□□□□ -0.72
PDPN-204ENST00000475043 CSDE1O75534 798 aaKnown RBP10.55□□□□□ -0.72
PDPN-204ENST00000475043 DARSP14868 501 aaKnown RBP10.55□□□□□ -0.72
PDPN-204ENST00000475043 FGFR4P22455 802 aa10.55□□□□□ -0.72
PDPN-204ENST00000475043 YWHABP31946 246 aaKnown RBP10.55□□□□□ -0.72
PDPN-204ENST00000475043 TXKP42681 527 aa10.55□□□□□ -0.72
PDPN-204ENST00000475043 POLGP54098 1239 aaPredicted RBP10.55□□□□□ -0.72
PDPN-204ENST00000475043 NPEPPSP55786 919 aa10.55□□□□□ -0.72
PDPN-204ENST00000475043 HMGN5P82970 282 aaKnown RBP10.55□□□□□ -0.72
PDPN-204ENST00000475043 CDC42EP1Q00587 391 aa10.55□□□□□ -0.72
PDPN-204ENST00000475043 CYP4A11Q02928 519 aa10.55□□□□□ -0.72
PDPN-204ENST00000475043 CTTNQ14247 550 aaKnown RBP10.55□□□□□ -0.72
PDPN-204ENST00000475043 EPHA7Q15375 998 aa10.55□□□□□ -0.72
PDPN-204ENST00000475043 TIGD5Q53EQ6 642 aa10.55□□□□□ -0.72
PDPN-204ENST00000475043 FAM102BQ5T8I3 360 aa10.55□□□□□ -0.72
PDPN-204ENST00000475043 FAM43BQ6ZT52 329 aaPredicted RBP10.55□□□□□ -0.72
PDPN-204ENST00000475043 EP400NLQ6ZTU2 488 aa10.55□□□□□ -0.72
PDPN-204ENST00000475043 OTUD6AQ7L8S5 288 aa10.55□□□□□ -0.72
PDPN-204ENST00000475043 ADAMTS19Q8TE59 1207 aa10.55□□□□□ -0.72
PDPN-204ENST00000475043 SLC7A3Q8WY07 619 aa10.55□□□□□ -0.72
PDPN-204ENST00000475043 CLP1Q92989 425 aaKnown RBP10.55□□□□□ -0.72
PDPN-204ENST00000475043 DYDC2Q96IM9 177 aa10.55□□□□□ -0.72
PDPN-204ENST00000475043 NLRP4Q96MN2 994 aa10.55□□□□□ -0.72
PDPN-204ENST00000475043 JPH2Q9BR39 696 aaPredicted RBP10.55□□□□□ -0.72
PDPN-204ENST00000475043 LLPHQ9BRT6 129 aaKnown RBP10.55□□□□□ -0.72
PDPN-204ENST00000475043 GCOM2Q9BZD3 368 aaPredicted RBP10.55□□□□□ -0.72
PDPN-204ENST00000475043 TTC12Q9H892 705 aaPredicted RBP10.55□□□□□ -0.72
PDPN-204ENST00000475043 UPF2Q9HAU5 1272 aaKnown RBP10.55□□□□□ -0.72
PDPN-204ENST00000475043 ATP6V0A4Q9HBG4 840 aa10.55□□□□□ -0.72
PDPN-204ENST00000475043 CYP26B1Q9NR63 512 aa10.55□□□□□ -0.72
PDPN-204ENST00000475043 SH2B1Q9NRF2 756 aaPredicted RBP10.55□□□□□ -0.72
PDPN-204ENST00000475043 TMEM161AQ9NX61 479 aa10.55□□□□□ -0.72
PDPN-204ENST00000475043 RGL1Q9NZL6 768 aa10.55□□□□□ -0.72
PDPN-204ENST00000475043 WRAP73Q9P2S5 460 aaPredicted RBP10.55□□□□□ -0.72
PDPN-204ENST00000475043 A0A087WZ62 844 aa10.54□□□□□ -0.72
PDPN-204ENST00000475043 IGKV6-21A0A0C4DH24 114 aa10.54□□□□□ -0.72
PDPN-204ENST00000475043 XIRP2A4UGR9 3374 aa10.54□□□□□ -0.72
PDPN-204ENST00000475043 WNT7AO00755 349 aa10.54□□□□□ -0.72
PDPN-204ENST00000475043 GRM6O15303 877 aa10.54□□□□□ -0.72
PDPN-204ENST00000475043 LINC00271P0C7V0 271 aa10.54□□□□□ -0.72
PDPN-204ENST00000475043 FGFR1P11362 822 aa10.54□□□□□ -0.72
PDPN-204ENST00000475043 MCM7P33993 719 aa10.54□□□□□ -0.72
PDPN-204ENST00000475043 RBM25P49756 843 aaKnown RBP10.54□□□□□ -0.72
PDPN-204ENST00000475043 SPIRE1Q08AE8 756 aa10.54□□□□□ -0.72
PDPN-204ENST00000475043 DSC3Q14574 896 aa10.54□□□□□ -0.72
PDPN-204ENST00000475043 KSR1Q8IVT5 923 aa10.54□□□□□ -0.72
PDPN-204ENST00000475043 TPH2Q8IWU9 490 aa10.54□□□□□ -0.72
PDPN-204ENST00000475043 C4orf19Q8IY42 314 aa10.54□□□□□ -0.72
PDPN-204ENST00000475043 EXOC8Q8IYI6 725 aa10.54□□□□□ -0.72
PDPN-204ENST00000475043 RNF169Q8NCN4 708 aa10.54□□□□□ -0.72
PDPN-204ENST00000475043 CEP89Q96ST8 783 aa10.54□□□□□ -0.72
PDPN-204ENST00000475043 UHRF1Q96T88 793 aaPredicted RBP10.54□□□□□ -0.72
PDPN-204ENST00000475043 FDXACB1Q9BRP7 624 aaPredicted RBP10.54□□□□□ -0.72
PDPN-204ENST00000475043 PLVAPQ9BX97 442 aa10.54□□□□□ -0.72
PDPN-204ENST00000475043 NSUN3Q9H649 340 aaKnown RBP10.54□□□□□ -0.72
PDPN-204ENST00000475043 ZSWIM4Q9H7M6 989 aa10.54□□□□□ -0.72
PDPN-204ENST00000475043 PLXNA4Q9HCM2 1894 aa10.54□□□□□ -0.72
PDPN-204ENST00000475043 ALG13Q9NP73 1137 aaKnown RBP10.54□□□□□ -0.72
PDPN-204ENST00000475043 VCANP13611 3396 aa10.54□□□□□ -0.72
PDPN-204ENST00000475043 ZBTB39O15060 712 aa10.53□□□□□ -0.72
PDPN-204ENST00000475043 BMP1P13497 986 aa10.53□□□□□ -0.72
PDPN-204ENST00000475043 KCNA5P22460 613 aa10.53□□□□□ -0.72
PDPN-204ENST00000475043 SFPQP23246 707 aaKnown RBP eCLIP10.53□□□□□ -0.72
PDPN-204ENST00000475043 RFC5P40937 340 aa10.53□□□□□ -0.72
PDPN-204ENST00000475043 RABEP1Q15276 862 aa10.53□□□□□ -0.72
PDPN-204ENST00000475043 XKR9Q5GH70 373 aa10.53□□□□□ -0.72
PDPN-204ENST00000475043 TCEAL5Q5H9L2 206 aa10.53□□□□□ -0.72
PDPN-204ENST00000475043 ZNF410Q86VK4 478 aa10.53□□□□□ -0.72
PDPN-204ENST00000475043 ABI1Q8IZP0 508 aa10.53□□□□□ -0.72
PDPN-204ENST00000475043 KLHL23Q8NBE8 558 aa10.53□□□□□ -0.72
PDPN-204ENST00000475043 PSPC1Q8WXF1 523 aaKnown RBP10.53□□□□□ -0.72
PDPN-204ENST00000475043 P2RX5Q93086 422 aa10.53□□□□□ -0.72
PDPN-204ENST00000475043 TMEM143Q96AN5 459 aa10.53□□□□□ -0.72
PDPN-204ENST00000475043 CCDC43Q96MW1 224 aaKnown RBP10.53□□□□□ -0.72
PDPN-204ENST00000475043 EIF2AK1Q9BQI3 630 aaKnown RBP10.53□□□□□ -0.72
PDPN-204ENST00000475043 INO80BQ9C086 356 aaPredicted RBP10.53□□□□□ -0.72
PDPN-204ENST00000475043 LMAN2LQ9H0V9 348 aa10.53□□□□□ -0.72
PDPN-204ENST00000475043 ELAC1Q9H777 363 aaKnown RBP10.53□□□□□ -0.72
PDPN-204ENST00000475043 UBE2ZQ9H832 354 aaPredicted RBP10.53□□□□□ -0.72
PDPN-204ENST00000475043 AAASQ9NRG9 546 aa10.53□□□□□ -0.72
PDPN-204ENST00000475043 DACT1Q9NYF0 836 aa10.53□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms