RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 TEKT3Q9BXF9 490 aa17.6■□□□□ 0.41
SRRT-209ENST00000474896 RNF26Q9BY78 433 aaPredicted RBP17.6■□□□□ 0.41
SRRT-209ENST00000474896 ADAM7Q9H2U9 754 aa17.6■□□□□ 0.41
SRRT-209ENST00000474896 TSHZ2Q9NRE2 1034 aa17.6■□□□□ 0.41
SRRT-209ENST00000474896 DACT1Q9NYF0 836 aa17.6■□□□□ 0.41
SRRT-209ENST00000474896 NR2E1Q9Y466 385 aa17.6■□□□□ 0.41
SRRT-209ENST00000474896 SNX14Q9Y5W7 946 aa17.6■□□□□ 0.41
SRRT-209ENST00000474896 HCFC2Q9Y5Z7 792 aa17.6■□□□□ 0.41
SRRT-209ENST00000474896 BCAR1P56945 870 aa17.59■□□□□ 0.41
SRRT-209ENST00000474896 NLRP5P59047 1200 aa17.59■□□□□ 0.41
SRRT-209ENST00000474896 CCT2P78371 535 aaKnown RBP17.59■□□□□ 0.41
SRRT-209ENST00000474896 BMS1Q14692 1282 aaKnown RBP17.59■□□□□ 0.41
SRRT-209ENST00000474896 CES5AQ6NT32 575 aa17.59■□□□□ 0.41
SRRT-209ENST00000474896 NIFKQ9BYG3 293 aaKnown RBP17.59■□□□□ 0.41
SRRT-209ENST00000474896 GCOM2Q9BZD3 368 aaPredicted RBP17.59■□□□□ 0.41
SRRT-209ENST00000474896 CHST12Q9NRB3 414 aa17.59■□□□□ 0.41
SRRT-209ENST00000474896 NID2Q14112 1375 aa17.58■□□□□ 0.4
SRRT-209ENST00000474896 IFNAR1P17181 557 aa17.58■□□□□ 0.4
SRRT-209ENST00000474896 RPS6KB1P23443 525 aa17.58■□□□□ 0.4
SRRT-209ENST00000474896 HSPA4P34932 840 aa17.58■□□□□ 0.4
SRRT-209ENST00000474896 CDC42EP1Q00587 391 aa17.58■□□□□ 0.4
SRRT-209ENST00000474896 ITIH3Q06033 890 aa17.58■□□□□ 0.4
SRRT-209ENST00000474896 LONRF3Q496Y0 759 aa17.58■□□□□ 0.4
SRRT-209ENST00000474896 MTERF2Q49AM1 385 aa17.58■□□□□ 0.4
SRRT-209ENST00000474896 MIER3Q7Z3K6 550 aa17.58■□□□□ 0.4
SRRT-209ENST00000474896 FBXL16Q8N461 479 aa17.58■□□□□ 0.4
SRRT-209ENST00000474896 KREMEN2Q8NCW0 462 aa17.58■□□□□ 0.4
SRRT-209ENST00000474896 TBCKQ8TEA7 893 aa17.58■□□□□ 0.4
SRRT-209ENST00000474896 TMEM169Q96HH4 297 aa17.58■□□□□ 0.4
SRRT-209ENST00000474896 RIPOR3Q96MK2 946 aa17.58■□□□□ 0.4
SRRT-209ENST00000474896 SH2D3AQ9BRG2 576 aa17.58■□□□□ 0.4
SRRT-209ENST00000474896 MRPL9Q9BYD2 267 aaKnown RBP17.58■□□□□ 0.4
SRRT-209ENST00000474896 POMKQ9H5K3 350 aa17.58■□□□□ 0.4
SRRT-209ENST00000474896 SEPT9Q9UHD8 586 aaPredicted RBP17.58■□□□□ 0.4
SRRT-209ENST00000474896 A0A087WZ62 844 aa17.57■□□□□ 0.4
SRRT-209ENST00000474896 TMEM150BA6NC51 233 aa17.57■□□□□ 0.4
SRRT-209ENST00000474896 C2CD4DB7Z1M9 353 aa17.57■□□□□ 0.4
SRRT-209ENST00000474896 PSMD10O75832 226 aa17.57■□□□□ 0.4
SRRT-209ENST00000474896 STBD1O95210 358 aa17.57■□□□□ 0.4
SRRT-209ENST00000474896 PDGFBP01127 241 aaPredicted RBP17.57■□□□□ 0.4
SRRT-209ENST00000474896 WEE2P0C1S8 567 aa17.57■□□□□ 0.4
SRRT-209ENST00000474896 PDIA3P30101 505 aaKnown RBP17.57■□□□□ 0.4
SRRT-209ENST00000474896 PHKA2P46019 1235 aa17.57■□□□□ 0.4
SRRT-209ENST00000474896 DNM2P50570 870 aa17.57■□□□□ 0.4
SRRT-209ENST00000474896 Q4G0T1 1027 aa17.57■□□□□ 0.4
SRRT-209ENST00000474896 XKR3Q5GH77 459 aa17.57■□□□□ 0.4
SRRT-209ENST00000474896 VPS52Q8N1B4 723 aa17.57■□□□□ 0.4
SRRT-209ENST00000474896 C12orf76Q8N812 135 aaPredicted RBP17.57■□□□□ 0.4
SRRT-209ENST00000474896 TMEM87AQ8NBN3 555 aa17.57■□□□□ 0.4
SRRT-209ENST00000474896 RDM1Q8NG50 284 aa17.57■□□□□ 0.4
SRRT-209ENST00000474896 LPPQ93052 612 aa17.57■□□□□ 0.4
SRRT-209ENST00000474896 NECTIN4Q96NY8 510 aa17.57■□□□□ 0.4
SRRT-209ENST00000474896 CEP89Q96ST8 783 aa17.57■□□□□ 0.4
SRRT-209ENST00000474896 FDXACB1Q9BRP7 624 aaPredicted RBP17.57■□□□□ 0.4
SRRT-209ENST00000474896 AGXT2Q9BYV1 514 aa17.57■□□□□ 0.4
SRRT-209ENST00000474896 NCOA5Q9HCD5 579 aaKnown RBP17.57■□□□□ 0.4
SRRT-209ENST00000474896 SH3GLB2Q9NR46 395 aa17.57■□□□□ 0.4
SRRT-209ENST00000474896 FAM86C1Q9NVL1 165 aa17.57■□□□□ 0.4
SRRT-209ENST00000474896 KMT2EQ8IZD2 1858 aa17.56■□□□□ 0.4
SRRT-209ENST00000474896 IGKV6-21A0A0C4DH24 114 aa17.56■□□□□ 0.4
SRRT-209ENST00000474896 DDX11L8A8MPP1 907 aa17.56■□□□□ 0.4
SRRT-209ENST00000474896 ZC3H11AO75152 810 aaKnown RBP eCLIP17.56■□□□□ 0.4
SRRT-209ENST00000474896 RARS2Q5T160 578 aaKnown RBP17.56■□□□□ 0.4
SRRT-209ENST00000474896 TWF2Q6IBS0 349 aaKnown RBP17.56■□□□□ 0.4
SRRT-209ENST00000474896 KANK3Q6NY19 840 aa17.56■□□□□ 0.4
SRRT-209ENST00000474896 RHPN2Q8IUC4 686 aa17.56■□□□□ 0.4
SRRT-209ENST00000474896 AUTS2Q8WXX7 1259 aa17.56■□□□□ 0.4
SRRT-209ENST00000474896 ATOH1Q92858 354 aaPredicted RBP17.56■□□□□ 0.4
SRRT-209ENST00000474896 SUCLA2Q9P2R7 463 aaPredicted RBP17.56■□□□□ 0.4
SRRT-209ENST00000474896 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.55■□□□□ 0.4
SRRT-209ENST00000474896 SFPQP23246 707 aaKnown RBP eCLIP17.55■□□□□ 0.4
SRRT-209ENST00000474896 PSMA5P28066 241 aa17.55■□□□□ 0.4
SRRT-209ENST00000474896 MTHFRP42898 656 aa17.55■□□□□ 0.4
SRRT-209ENST00000474896 C8orf34Q49A92 452 aa17.55■□□□□ 0.4
SRRT-209ENST00000474896 ATAT1Q5SQI0 421 aa17.55■□□□□ 0.4
SRRT-209ENST00000474896 DDX53Q86TM3 631 aaKnown RBP17.55■□□□□ 0.4
SRRT-209ENST00000474896 TMEM173Q86WV6 379 aaPredicted RBP17.55■□□□□ 0.4
SRRT-209ENST00000474896 UBALD2Q8IYN6 164 aa17.55■□□□□ 0.4
SRRT-209ENST00000474896 TRAIPQ9BWF2 469 aa17.55■□□□□ 0.4
SRRT-209ENST00000474896 C22orf23Q9BZE7 217 aa17.55■□□□□ 0.4
SRRT-209ENST00000474896 INO80BQ9C086 356 aaPredicted RBP17.55■□□□□ 0.4
SRRT-209ENST00000474896 ZBP1Q9H171 429 aa17.55■□□□□ 0.4
SRRT-209ENST00000474896 IRF2BPLQ9H1B7 796 aa17.55■□□□□ 0.4
SRRT-209ENST00000474896 NRDE2Q9H7Z3 1164 aa17.55■□□□□ 0.4
SRRT-209ENST00000474896 PCDHA4Q9UN74 947 aa17.55■□□□□ 0.4
SRRT-209ENST00000474896 SORCS3Q9UPU3 1222 aa17.55■□□□□ 0.4
SRRT-209ENST00000474896 PIN4Q9Y237 131 aaKnown RBP17.55■□□□□ 0.4
SRRT-209ENST00000474896 CYP3A7-CYP3A51PA0A087WV96 503 aa17.54■□□□□ 0.4
SRRT-209ENST00000474896 MEIS3P2A8K0S8 358 aa17.54■□□□□ 0.4
SRRT-209ENST00000474896 OFD1O75665 1012 aa17.54■□□□□ 0.4
SRRT-209ENST00000474896 TDP2O95551 362 aa17.54■□□□□ 0.4
SRRT-209ENST00000474896 BRD1O95696 1058 aa17.54■□□□□ 0.4
SRRT-209ENST00000474896 GALTP07902 379 aa17.54■□□□□ 0.4
SRRT-209ENST00000474896 SKIP12755 728 aa17.54■□□□□ 0.4
SRRT-209ENST00000474896 EPCAMP16422 314 aa17.54■□□□□ 0.4
SRRT-209ENST00000474896 CYP3A7P24462 503 aa17.54■□□□□ 0.4
SRRT-209ENST00000474896 EVCP57679 992 aa17.54■□□□□ 0.4
SRRT-209ENST00000474896 SSRP1Q08945 709 aaKnown RBP17.54■□□□□ 0.4
SRRT-209ENST00000474896 MTMR3Q13615 1198 aa17.54■□□□□ 0.4
SRRT-209ENST00000474896 NOMO2Q5JPE7 1267 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms