RNA–Protein interactions for RNA: ENST00000474835.5

USP16-205, Transcript of ubiquitin specific peptidase 16, humanhuman

TSL 1 (best)

Gene USP16, Length 3,835 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-205ENST00000474835 PROM2Q8N271 834 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 ABTB2Q8N961 1025 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 ANKK1Q8NFD2 765 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 TP53INP1Q96A56 240 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 RIOK1Q9BRS2 568 aaKnown RBP4.46□□□□□ -1.7
USP16-205ENST00000474835 C1orf21Q9H246 121 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 FAIMQ9NVQ4 179 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 CTNND2Q9UQB3 1225 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 GDAQ9Y2T3 454 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 NDUFB9Q9Y6M9 179 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 IGSF9BQ9UPX0 1349 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 GTPBP10A4D1E9 387 aaKnown RBP4.46□□□□□ -1.7
USP16-205ENST00000474835 TRIM49BA6NDI0 452 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 LAD1O00515 517 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 KLRC1P26715 233 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 SLC1A4P43007 532 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 WDR4P57081 412 aaKnown RBP4.46□□□□□ -1.7
USP16-205ENST00000474835 XIAPP98170 497 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 CDK16Q00536 496 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 KLF1Q13351 362 aaPredicted RBP4.46□□□□□ -1.7
USP16-205ENST00000474835 DYNC1I2Q13409 638 aaKnown RBP4.46□□□□□ -1.7
USP16-205ENST00000474835 SNAPC2Q13487 334 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 CCDC122Q5T0U0 273 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 IL23RQ5VWK5 629 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 CACNA2D4Q7Z3S7 1137 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 DIS3L2Q8IYB7 885 aaKnown RBP4.46□□□□□ -1.7
USP16-205ENST00000474835 ZBTB8BQ8NAP8 495 aaPredicted RBP4.46□□□□□ -1.7
USP16-205ENST00000474835 SLC7A14Q8TBB6 771 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 ITPKCQ96DU7 683 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 MAGEB18Q96M61 343 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 PNMA5Q96PV4 448 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.46□□□□□ -1.73e-9■■■■□ 22
USP16-205ENST00000474835 OSBPL1AQ9BXW6 950 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 TRIM9Q9C026 710 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 ZSWIM4Q9H7M6 989 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 GPAMQ9HCL2 828 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 PIH1D3Q9NQM4 214 aaKnown RBP4.46□□□□□ -1.7
USP16-205ENST00000474835 IL1RAPL1Q9NZN1 696 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 SWAP70Q9UH65 585 aa4.46□□□□□ -1.7
USP16-205ENST00000474835 HOOK1Q9UJC3 728 aaKnown RBP4.46□□□□□ -1.7
USP16-205ENST00000474835 ZNF638Q14966 1978 aaKnown RBP4.45□□□□□ -1.7
USP16-205ENST00000474835 GOLGA6L4A6NEF3 574 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 FAM187AA6NFU0 413 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 GOLGA8BA8MQT2 603 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 E9PQ18 207 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 SLC22A1O15245 554 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 NCK2O43639 380 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 DIAPH2O60879 1101 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 GSRP00390 522 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 BCRP11274 1271 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 PCP11498 1178 aaKnown RBP4.45□□□□□ -1.7
USP16-205ENST00000474835 CHRNB2P17787 502 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 RXRAP19793 462 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 ETV4P43268 484 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 RAB15P59190 212 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 ACBD5Q5T8D3 534 aaPredicted RBP4.45□□□□□ -1.7
USP16-205ENST00000474835 GKAP1Q5VSY0 366 aaPredicted RBP4.45□□□□□ -1.7
USP16-205ENST00000474835 RNF220Q5VTB9 566 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 TMTC3Q6ZXV5 915 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 KIAA1328Q86T90 577 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 PDSS2Q86YH6 399 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 ZBED8Q8IZ13 594 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 AGGF1Q8N302 714 aaeCLIP4.45□□□□□ -1.7
USP16-205ENST00000474835 MARVELD2Q8N4S9 558 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 MIGA1Q8NAN2 632 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 CCDC197Q8NCU1 140 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 TEKT4Q8WW24 435 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 DUS3LQ96G46 650 aaKnown RBP4.45□□□□□ -1.7
USP16-205ENST00000474835 RSRC1Q96IZ7 334 aaKnown RBP4.45□□□□□ -1.7
USP16-205ENST00000474835 BIRC8Q96P09 236 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 RPS6KC1Q96S38 1066 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 YIPF2Q9BWQ6 316 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 TDRD1Q9BXT4 1180 aaKnown RBP4.45□□□□□ -1.7
USP16-205ENST00000474835 UBAP1Q9NZ09 502 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 PTTG2Q9NZH5 202 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 CEP131Q9UPN4 1083 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 KIAA1024Q9UPX6 916 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 EFR3BQ9Y2G0 817 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 ATP6V0A2Q9Y487 856 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 KDM3AQ9Y4C1 1321 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 TTLL13PA6NNM8 815 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 UBAP1LF5GYI3 381 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 EML1O00423 815 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 IRS4O14654 1257 aaPredicted RBP4.45□□□□□ -1.7
USP16-205ENST00000474835 KLF11O14901 512 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 MAGEC1O60732 1142 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 RAPGEF3O95398 923 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 SERPING1P05155 500 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 TFAP2AP05549 437 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 FXR2P51116 673 aaKnown RBP eCLIP4.45□□□□□ -1.7
USP16-205ENST00000474835 OXCT1P55809 520 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 CTBSQ01459 385 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 CEBPZQ03701 1054 aaKnown RBP4.45□□□□□ -1.7
USP16-205ENST00000474835 CBX2Q14781 532 aaPredicted RBP4.45□□□□□ -1.7
USP16-205ENST00000474835 TRIM71Q2Q1W2 868 aaKnown RBP4.45□□□□□ -1.7
USP16-205ENST00000474835 CFAP221Q4G0U5 840 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 SPECC1Q5M775 1068 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 FKBP15Q5T1M5 1219 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 TYW1BQ6NUM6 668 aa4.45□□□□□ -1.7
USP16-205ENST00000474835 C11orf63Q6NUN7 778 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms