RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 TRPC6Q9Y210 931 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 TRAF3IP3Q9Y228 551 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 ARL2BPQ9Y2Y0 163 aa8.68□□□□□ -1.02
CCDC93-208ENST00000474546 ZNF330Q9Y3S2 320 aaPredicted RBP8.68□□□□□ -1.02
CCDC93-208ENST00000474546 USP15Q9Y4E8 981 aaPredicted RBP8.68□□□□□ -1.02
CCDC93-208ENST00000474546 SMCO2A6NFE2 343 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 TBX3O15119 743 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 BUB1O43683 1085 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 HIP1RO75146 1068 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 TCEA3O75764 348 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 NEBLO76041 1014 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 PLEKP08567 350 aaPredicted RBP8.67□□□□□ -1.02
CCDC93-208ENST00000474546 VIMP08670 466 aaKnown RBP8.67□□□□□ -1.02
CCDC93-208ENST00000474546 RARGP13631 454 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 ATP2A2P16615 1042 aaKnown RBP8.67□□□□□ -1.02
CCDC93-208ENST00000474546 GAP43P17677 238 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 MYH10P35580 1976 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 BCAMP50895 628 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 ADCY7P51828 1080 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 RWDD2BP57060 319 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 CETN1Q12798 172 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 MKRN4PQ13434 485 aaPredicted RBP8.67□□□□□ -1.02
CCDC93-208ENST00000474546 SETDB1Q15047 1291 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 SF3B3Q15393 1217 aaKnown RBP8.67□□□□□ -1.02
CCDC93-208ENST00000474546 PDCD2Q16342 344 aaPredicted RBP8.67□□□□□ -1.02
CCDC93-208ENST00000474546 EXOC3L4Q17RC7 722 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 PARP6Q2NL67 630 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 LETM2Q2VYF4 491 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 C11orf91Q3C1V1 193 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 AP1ARQ63HQ0 302 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 C11orf63Q6NUN7 778 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 AGGF1Q8N302 714 aaeCLIP8.67□□□□□ -1.02
CCDC93-208ENST00000474546 SNX29Q8TEQ0 813 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 GRK7Q8WTQ7 553 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 SDR42E1Q8WUS8 393 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 CNKSR1Q969H4 720 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 SHISA4Q96DD7 197 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 DTNBP1Q96EV8 351 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 ZNF317Q96PQ6 595 aaPredicted RBP8.67□□□□□ -1.02
CCDC93-208ENST00000474546 RPS6KC1Q96S38 1066 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 TXLNGYQ9BZA5 131 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 PHACTR1Q9C0D0 580 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 GANQ9H2C0 597 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 VCXQ9H320 206 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 RXFP1Q9HBX9 757 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 SLC39A2Q9NP94 309 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 UBN1Q9NPG3 1134 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 PANK4Q9NVE7 773 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 SENP1Q9P0U3 644 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 PCYOX1Q9UHG3 505 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 BAIAP2L1Q9UHR4 511 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 MAD2L2Q9UI95 211 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.67□□□□□ -1.02
CCDC93-208ENST00000474546 TACC3Q9Y6A5 838 aa8.67□□□□□ -1.02
CCDC93-208ENST00000474546 MYH7BA7E2Y1 1941 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 NRXN2Q9P2S2 1712 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 ZNF831Q5JPB2 1677 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 MYO3BQ8WXR4 1341 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 MYMKA6NI61 221 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 KLRF2D3W0D1 207 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 FZD9O00144 591 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 DNM1LO00429 736 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 NCK2O43639 380 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 AHCYL1O43865 530 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 MARCH6O60337 910 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 RTN2O75298 545 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 RPS6KA4O75676 772 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 DCTN3O75935 186 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 FTCDO95954 541 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 GSTA2P09210 222 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 FCER1AP12319 257 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 NQO1P15559 274 aaKnown RBP8.66□□□□□ -1.02
CCDC93-208ENST00000474546 MUTP22033 750 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 ECHS1P30084 290 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 TM4SF1P30408 202 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 SLC18A1P54219 525 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 COPS2P61201 443 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 TFAP4Q01664 338 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 STRN3Q13033 797 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 COASYQ13057 564 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 CALCOCO2Q13137 446 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 ADAM9Q13443 819 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 ITPK1Q13572 414 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 MYBPC2Q14324 1141 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 KIAA1755Q5JYT7 1200 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 SEL1L2Q5TEA6 688 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 C12orf60Q5U649 245 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 DUPD1Q68J44 220 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 TTC19Q6DKK2 380 aaPredicted RBP8.66□□□□□ -1.02
CCDC93-208ENST00000474546 CAPRIN2Q6IMN6 1127 aaKnown RBP8.66□□□□□ -1.02
CCDC93-208ENST00000474546 PPP1R2P3Q6NXS1 205 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 DAAM2Q86T65 1068 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 DYDC1Q8WWB3 177 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 CNKSR2Q8WXI2 1034 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 INPP5DQ92835 1189 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 SLCO2A1Q92959 643 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 NSUN4Q96CB9 384 aaKnown RBP8.66□□□□□ -1.02
CCDC93-208ENST00000474546 MS4A14Q96JA4 679 aa8.66□□□□□ -1.02
CCDC93-208ENST00000474546 CCDC85AQ96PX6 553 aaPredicted RBP8.66□□□□□ -1.02
CCDC93-208ENST00000474546 TMEM237Q96Q45 408 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms