RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 CEP170P1Q96L14 293 aa22.8■■□□□ 1.24
PDLIM4-206ENST00000474421 SH2D3AQ9BRG2 576 aa22.8■■□□□ 1.24
PDLIM4-206ENST00000474421 FDXACB1Q9BRP7 624 aaPredicted RBP22.8■■□□□ 1.24
PDLIM4-206ENST00000474421 RNF19AQ9NV58 838 aa22.8■■□□□ 1.24
PDLIM4-206ENST00000474421 TBX10O75333 385 aa22.79■■□□□ 1.24
PDLIM4-206ENST00000474421 FGFR4P22455 802 aa22.79■■□□□ 1.24
PDLIM4-206ENST00000474421 RFC5P40937 340 aa22.79■■□□□ 1.24
PDLIM4-206ENST00000474421 NRIP1P48552 1158 aa22.79■■□□□ 1.24
PDLIM4-206ENST00000474421 PLCB3Q01970 1234 aa22.79■■□□□ 1.24
PDLIM4-206ENST00000474421 DLX2Q07687 328 aaPredicted RBP22.79■■□□□ 1.24
PDLIM4-206ENST00000474421 TMEM31Q5JXX7 168 aa22.79■■□□□ 1.24
PDLIM4-206ENST00000474421 PLA2G4FQ68DD2 849 aa22.79■■□□□ 1.24
PDLIM4-206ENST00000474421 OTUD6AQ7L8S5 288 aa22.79■■□□□ 1.24
PDLIM4-206ENST00000474421 ADGRD2Q7Z7M1 963 aa22.79■■□□□ 1.24
PDLIM4-206ENST00000474421 POTEDQ86YR6 584 aa22.79■■□□□ 1.24
PDLIM4-206ENST00000474421 ADHFE1Q8IWW8 467 aa22.79■■□□□ 1.24
PDLIM4-206ENST00000474421 C4orf19Q8IY42 314 aa22.79■■□□□ 1.24
PDLIM4-206ENST00000474421 NSUN7Q8NE18 718 aaKnown RBP22.79■■□□□ 1.24
PDLIM4-206ENST00000474421 TNFRSF25Q93038 417 aa22.79■■□□□ 1.24
PDLIM4-206ENST00000474421 ZNF558Q96NG5 402 aa22.79■■□□□ 1.24
PDLIM4-206ENST00000474421 POP1Q99575 1024 aaKnown RBP22.79■■□□□ 1.24
PDLIM4-206ENST00000474421 CDCA3Q99618 268 aaPredicted RBP22.79■■□□□ 1.24
PDLIM4-206ENST00000474421 TRAIPQ9BWF2 469 aa22.79■■□□□ 1.24
PDLIM4-206ENST00000474421 MRPL9Q9BYD2 267 aaKnown RBP22.79■■□□□ 1.24
PDLIM4-206ENST00000474421 TLE6Q9H808 572 aa22.79■■□□□ 1.24
PDLIM4-206ENST00000474421 LINC01565O15544 149 aa22.78■■□□□ 1.24
PDLIM4-206ENST00000474421 MBTPS2O43462 519 aa22.78■■□□□ 1.24
PDLIM4-206ENST00000474421 GAS2O43903 313 aaKnown RBP22.78■■□□□ 1.24
PDLIM4-206ENST00000474421 CSDE1O75534 798 aaKnown RBP22.78■■□□□ 1.24
PDLIM4-206ENST00000474421 ALADP13716 330 aa22.78■■□□□ 1.24
PDLIM4-206ENST00000474421 POLGP54098 1239 aaPredicted RBP22.78■■□□□ 1.24
PDLIM4-206ENST00000474421 KRT17Q04695 432 aa22.78■■□□□ 1.24
PDLIM4-206ENST00000474421 ZP2Q05996 745 aa22.78■■□□□ 1.24
PDLIM4-206ENST00000474421 NR5A1Q13285 461 aa22.78■■□□□ 1.24
PDLIM4-206ENST00000474421 CLUL1Q15846 466 aa22.78■■□□□ 1.24
PDLIM4-206ENST00000474421 EARS2Q5JPH6 523 aaKnown RBP22.78■■□□□ 1.24
PDLIM4-206ENST00000474421 NCAPH2Q6IBW4 605 aa22.78■■□□□ 1.24
PDLIM4-206ENST00000474421 ZNF598Q86UK7 904 aaKnown RBP22.78■■□□□ 1.24
PDLIM4-206ENST00000474421 MRPS27Q92552 414 aaKnown RBP22.78■■□□□ 1.24
PDLIM4-206ENST00000474421 NLRP4Q96MN2 994 aa22.78■■□□□ 1.24
PDLIM4-206ENST00000474421 LXNQ9BS40 222 aa22.78■■□□□ 1.24
PDLIM4-206ENST00000474421 ZSWIM4Q9H7M6 989 aa22.78■■□□□ 1.24
PDLIM4-206ENST00000474421 HCSTQ9UBK5 93 aa22.78■■□□□ 1.24
PDLIM4-206ENST00000474421 DTNBO60941 627 aa22.77■■□□□ 1.24
PDLIM4-206ENST00000474421 LARGE1O95461 756 aa22.77■■□□□ 1.24
PDLIM4-206ENST00000474421 YWHABP31946 246 aaKnown RBP22.77■■□□□ 1.24
PDLIM4-206ENST00000474421 NPEPPSP55786 919 aa22.77■■□□□ 1.24
PDLIM4-206ENST00000474421 TWF2Q6IBS0 349 aaKnown RBP22.77■■□□□ 1.24
PDLIM4-206ENST00000474421 KCNT2Q6UVM3 1135 aa22.77■■□□□ 1.24
PDLIM4-206ENST00000474421 LRRC55Q6ZSA7 311 aa22.77■■□□□ 1.24
PDLIM4-206ENST00000474421 CATSPER4Q7RTX7 472 aa22.77■■□□□ 1.24
PDLIM4-206ENST00000474421 PSPC1Q8WXF1 523 aaKnown RBP22.77■■□□□ 1.24
PDLIM4-206ENST00000474421 DHX33Q9H6R0 707 aaKnown RBP22.77■■□□□ 1.24
PDLIM4-206ENST00000474421 COL4A3BPQ9Y5P4 624 aa22.77■■□□□ 1.24
PDLIM4-206ENST00000474421 CARNS1A5YM72 827 aa22.76■■□□□ 1.23
PDLIM4-206ENST00000474421 GPR37L1O60883 481 aa22.76■■□□□ 1.23
PDLIM4-206ENST00000474421 EYA4O95677 639 aa22.76■■□□□ 1.23
PDLIM4-206ENST00000474421 PHKA2P46019 1235 aa22.76■■□□□ 1.23
PDLIM4-206ENST00000474421 RAB27AP51159 221 aa22.76■■□□□ 1.23
PDLIM4-206ENST00000474421 COASYQ13057 564 aa22.76■■□□□ 1.23
PDLIM4-206ENST00000474421 CLLU1OSQ5K130 101 aa22.76■■□□□ 1.23
PDLIM4-206ENST00000474421 RBM23Q86U06 439 aaKnown RBP22.76■■□□□ 1.23
PDLIM4-206ENST00000474421 TCP11Q8WWU5 503 aa22.76■■□□□ 1.23
PDLIM4-206ENST00000474421 KHSRPQ92945 711 aaKnown RBP eCLIP22.76■■□□□ 1.23
PDLIM4-206ENST00000474421 MSLNLQ96KJ4 702 aa22.76■■□□□ 1.23
PDLIM4-206ENST00000474421 NGRNQ9NPE2 291 aaKnown RBP22.76■■□□□ 1.23
PDLIM4-206ENST00000474421 SPG21Q9NZD8 308 aa22.76■■□□□ 1.23
PDLIM4-206ENST00000474421 PCDHA12Q9UN75 941 aa22.76■■□□□ 1.23
PDLIM4-206ENST00000474421 PIN4Q9Y237 131 aaKnown RBP22.76■■□□□ 1.23
PDLIM4-206ENST00000474421 FAM205CA6NFA0 338 aa22.75■■□□□ 1.23
PDLIM4-206ENST00000474421 C19orf67A6NJJ6 358 aa22.75■■□□□ 1.23
PDLIM4-206ENST00000474421 FSCN2O14926 492 aa22.75■■□□□ 1.23
PDLIM4-206ENST00000474421 ASAP2O43150 1006 aa22.75■■□□□ 1.23
PDLIM4-206ENST00000474421 SRGAP2BP0DMP2 458 aa22.75■■□□□ 1.23
PDLIM4-206ENST00000474421 ATF7P17544 494 aaPredicted RBP22.75■■□□□ 1.23
PDLIM4-206ENST00000474421 SPIRE1Q08AE8 756 aa22.75■■□□□ 1.23
PDLIM4-206ENST00000474421 CALCRLQ16602 461 aa22.75■■□□□ 1.23
PDLIM4-206ENST00000474421 SRGAP1Q7Z6B7 1085 aa22.75■■□□□ 1.23
PDLIM4-206ENST00000474421 KSR1Q8IVT5 923 aa22.75■■□□□ 1.23
PDLIM4-206ENST00000474421 DIS3L2Q8IYB7 885 aaKnown RBP22.75■■□□□ 1.23
PDLIM4-206ENST00000474421 HELQQ8TDG4 1101 aa22.75■■□□□ 1.23
PDLIM4-206ENST00000474421 DYDC2Q96IM9 177 aa22.75■■□□□ 1.23
PDLIM4-206ENST00000474421 LRFN3Q9BTN0 628 aa22.75■■□□□ 1.23
PDLIM4-206ENST00000474421 RGL1Q9NZL6 768 aa22.75■■□□□ 1.23
PDLIM4-206ENST00000474421 WRAP73Q9P2S5 460 aaPredicted RBP22.75■■□□□ 1.23
PDLIM4-206ENST00000474421 C5orf42Q9H799 3197 aa22.75■■□□□ 1.23
PDLIM4-206ENST00000474421 BTBD18B2RXH4 712 aa22.74■■□□□ 1.23
PDLIM4-206ENST00000474421 JAK2O60674 1132 aa22.74■■□□□ 1.23
PDLIM4-206ENST00000474421 CENPBP07199 599 aaPredicted RBP22.74■■□□□ 1.23
PDLIM4-206ENST00000474421 ERVFC1P60507 584 aa22.74■■□□□ 1.23
PDLIM4-206ENST00000474421 DUSP6Q16828 381 aa22.74■■□□□ 1.23
PDLIM4-206ENST00000474421 SMRP1Q8NCR6 262 aa22.74■■□□□ 1.23
PDLIM4-206ENST00000474421 PRPF31Q8WWY3 499 aaKnown RBP22.74■■□□□ 1.23
PDLIM4-206ENST00000474421 TCF25Q9BQ70 676 aa22.74■■□□□ 1.23
PDLIM4-206ENST00000474421 IFT122Q9HBG6 1241 aa22.74■■□□□ 1.23
PDLIM4-206ENST00000474421 ENTPD7Q9NQZ7 604 aa22.74■■□□□ 1.23
PDLIM4-206ENST00000474421 CLEC1BQ9P126 229 aa22.74■■□□□ 1.23
PDLIM4-206ENST00000474421 PCDHGC5Q9Y5F6 944 aa22.74■■□□□ 1.23
PDLIM4-206ENST00000474421 NEMFO60524 1076 aa22.73■■□□□ 1.23
PDLIM4-206ENST00000474421 ZNF623O75123 536 aa22.73■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms