RNA–Protein interactions for RNA: ENST00000474409.1

CNN3-205, Transcript of calponin 3, humanhuman

TSL 3

Gene CNN3, Length 544 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN3-205ENST00000474409 MXD4Q14582 209 aaPredicted RBP9.2□□□□□ -0.94
CNN3-205ENST00000474409 PTGISQ16647 500 aa9.2□□□□□ -0.94
CNN3-205ENST00000474409 DPCR1Q3MIW9 517 aa9.2□□□□□ -0.94
CNN3-205ENST00000474409 MARCH8Q5T0T0 291 aa9.2□□□□□ -0.94
CNN3-205ENST00000474409 TAF2Q6P1X5 1199 aa9.2□□□□□ -0.94
CNN3-205ENST00000474409 LRSAM1Q6UWE0 723 aa9.2□□□□□ -0.94
CNN3-205ENST00000474409 RUFY4Q6ZNE9 571 aa9.2□□□□□ -0.94
CNN3-205ENST00000474409 ZBTB8OSQ8IWT0 167 aa9.2□□□□□ -0.94
CNN3-205ENST00000474409 SMYD4Q8IYR2 804 aaPredicted RBP9.2□□□□□ -0.94
CNN3-205ENST00000474409 KIAA0895Q8NCT3 520 aa9.2□□□□□ -0.94
CNN3-205ENST00000474409 DEPTORQ8TB45 409 aa9.2□□□□□ -0.94
CNN3-205ENST00000474409 ASAP3Q8TDY4 903 aa9.2□□□□□ -0.94
CNN3-205ENST00000474409 DIS3LQ8TF46 1054 aaKnown RBP9.2□□□□□ -0.94
CNN3-205ENST00000474409 BSNDQ8WZ55 320 aa9.2□□□□□ -0.94
CNN3-205ENST00000474409 KIFC3Q9BVG8 833 aa9.2□□□□□ -0.94
CNN3-205ENST00000474409 SEZ6LQ9BYH1 1024 aa9.2□□□□□ -0.94
CNN3-205ENST00000474409 SENP6Q9GZR1 1112 aaPredicted RBP9.2□□□□□ -0.94
CNN3-205ENST00000474409 TSPY26PQ9H489 355 aa9.2□□□□□ -0.94
CNN3-205ENST00000474409 PDLIM7Q9NR12 457 aa9.2□□□□□ -0.94
CNN3-205ENST00000474409 KCNG1Q9UIX4 513 aa9.2□□□□□ -0.94
CNN3-205ENST00000474409 CTNND2Q9UQB3 1225 aa9.2□□□□□ -0.94
CNN3-205ENST00000474409 PHLPP2Q6ZVD8 1323 aa9.2□□□□□ -0.94
CNN3-205ENST00000474409 KIAA1671Q9BY89 1806 aa9.19□□□□□ -0.94
CNN3-205ENST00000474409 NLRC5Q86WI3 1866 aa9.19□□□□□ -0.94
CNN3-205ENST00000474409 ARVCFO00192 962 aa9.19□□□□□ -0.94
CNN3-205ENST00000474409 EIF3DO15371 548 aaKnown RBP eCLIP9.19□□□□□ -0.94
CNN3-205ENST00000474409 TLR3O15455 904 aaKnown RBP9.19□□□□□ -0.94
CNN3-205ENST00000474409 VTNP04004 478 aa9.19□□□□□ -0.94
CNN3-205ENST00000474409 RPLP2P05387 115 aaKnown RBP9.19□□□□□ -0.94
CNN3-205ENST00000474409 MYBP10242 640 aa9.19□□□□□ -0.94
CNN3-205ENST00000474409 MAPTP10636 758 aaKnown RBP9.19□□□□□ -0.94
CNN3-205ENST00000474409 CAPN2P17655 700 aa9.19□□□□□ -0.94
CNN3-205ENST00000474409 NMT1P30419 496 aaKnown RBP9.19□□□□□ -0.94
CNN3-205ENST00000474409 ABCD1P33897 745 aa9.19□□□□□ -0.94
CNN3-205ENST00000474409 PPP1R2P41236 205 aa9.19□□□□□ -0.94
CNN3-205ENST00000474409 PHKA2P46019 1235 aa9.19□□□□□ -0.94
CNN3-205ENST00000474409 NPTX2P47972 431 aa9.19□□□□□ -0.94
CNN3-205ENST00000474409 ATN1P54259 1190 aaPredicted RBP9.19□□□□□ -0.94
CNN3-205ENST00000474409 NCKAP1LP55160 1127 aa9.19□□□□□ -0.94
CNN3-205ENST00000474409 ZNF445P59923 1031 aa9.19□□□□□ -0.94
CNN3-205ENST00000474409 ADAM17P78536 824 aa9.19□□□□□ -0.94
CNN3-205ENST00000474409 TMEM62Q0P6H9 643 aa9.19□□□□□ -0.94
CNN3-205ENST00000474409 LAMTOR4Q0VGL1 99 aa9.19□□□□□ -0.94
CNN3-205ENST00000474409 STK4Q13043 487 aa9.19□□□□□ -0.94
CNN3-205ENST00000474409 ALCAMQ13740 583 aa9.19□□□□□ -0.94
CNN3-205ENST00000474409 CAPSQ13938 189 aa9.19□□□□□ -0.94
CNN3-205ENST00000474409 HIC1Q14526 733 aa9.19□□□□□ -0.94
CNN3-205ENST00000474409 ANO6Q4KMQ2 910 aa9.19□□□□□ -0.94
CNN3-205ENST00000474409 KLHL10Q6JEL2 608 aa9.19□□□□□ -0.94
CNN3-205ENST00000474409 RSPH3Q86UC2 560 aa9.19□□□□□ -0.94
CNN3-205ENST00000474409 MYOCDQ8IZQ8 938 aa9.19□□□□□ -0.94
CNN3-205ENST00000474409 CCDC155Q8N6L0 562 aa9.19□□□□□ -0.94
CNN3-205ENST00000474409 LINC01465Q8N7H1 131 aa9.19□□□□□ -0.94
CNN3-205ENST00000474409 RNF149Q8NC42 400 aa9.19□□□□□ -0.94
CNN3-205ENST00000474409 DNAJB3Q8WWF6 145 aa9.19□□□□□ -0.94
CNN3-205ENST00000474409 SPIRE2Q8WWL2 714 aa9.19□□□□□ -0.94
CNN3-205ENST00000474409 NLRP7Q8WX94 980 aa9.19□□□□□ -0.94
CNN3-205ENST00000474409 FUCA2Q9BTY2 467 aa9.19□□□□□ -0.94
CNN3-205ENST00000474409 NAT10Q9H0A0 1025 aaKnown RBP9.19□□□□□ -0.94
CNN3-205ENST00000474409 DNAJC25Q9H1X3 360 aa9.19□□□□□ -0.94
CNN3-205ENST00000474409 C11orf49Q9H6J7 331 aa9.19□□□□□ -0.94
CNN3-205ENST00000474409 TRMT13Q9NUP7 481 aaKnown RBP9.19□□□□□ -0.94
CNN3-205ENST00000474409 GINS2Q9Y248 185 aa9.19□□□□□ -0.94
CNN3-205ENST00000474409 GRIN2DO15399 1336 aa9.19□□□□□ -0.94
CNN3-205ENST00000474409 DENND3A2RUS2 1198 aa9.18□□□□□ -0.94
CNN3-205ENST00000474409 PSMA7O14818 248 aa9.18□□□□□ -0.94
CNN3-205ENST00000474409 ASAP2O43150 1006 aa9.18□□□□□ -0.94
CNN3-205ENST00000474409 PQBP1O60828 265 aaKnown RBP9.18□□□□□ -0.94
CNN3-205ENST00000474409 CTSHP09668 335 aa9.18□□□□□ -0.94
CNN3-205ENST00000474409 SRGAP2CP0DJJ0 459 aa9.18□□□□□ -0.94
CNN3-205ENST00000474409 GPC3P51654 580 aa9.18□□□□□ -0.94
CNN3-205ENST00000474409 CASP5P51878 434 aa9.18□□□□□ -0.94
CNN3-205ENST00000474409 NLRP11P59045 1033 aaKnown RBP9.18□□□□□ -0.94
CNN3-205ENST00000474409 STRN3Q13033 797 aa9.18□□□□□ -0.94
CNN3-205ENST00000474409 PAK1Q13153 545 aa9.18□□□□□ -0.94
CNN3-205ENST00000474409 PTK7Q13308 1070 aa9.18□□□□□ -0.94
CNN3-205ENST00000474409 MKRN4PQ13434 485 aaPredicted RBP9.18□□□□□ -0.94
CNN3-205ENST00000474409 C11orf57Q6ZUT1 292 aaPredicted RBP9.18□□□□□ -0.94
CNN3-205ENST00000474409 HAUS6Q7Z4H7 955 aa9.18□□□□□ -0.94
CNN3-205ENST00000474409 NECAB2Q7Z6G3 386 aa9.18□□□□□ -0.94
CNN3-205ENST00000474409 SERINC5Q86VE9 423 aa9.18□□□□□ -0.94
CNN3-205ENST00000474409 ZNF410Q86VK4 478 aa9.18□□□□□ -0.94
CNN3-205ENST00000474409 KSR1Q8IVT5 923 aa9.18□□□□□ -0.94
CNN3-205ENST00000474409 ADGRA3Q8IWK6 1321 aa9.18□□□□□ -0.94
CNN3-205ENST00000474409 NELFCDQ8IXH7 590 aa9.18□□□□□ -0.94
CNN3-205ENST00000474409 KIAA0319LQ8IZA0 1049 aa9.18□□□□□ -0.94
CNN3-205ENST00000474409 MLKLQ8NB16 471 aa9.18□□□□□ -0.94
CNN3-205ENST00000474409 PRPF31Q8WWY3 499 aaKnown RBP9.18□□□□□ -0.94
CNN3-205ENST00000474409 HVCN1Q96D96 273 aa9.18□□□□□ -0.94
CNN3-205ENST00000474409 ZNF668Q96K58 619 aaPredicted RBP9.18□□□□□ -0.94
CNN3-205ENST00000474409 FGFBP2Q9BYJ0 223 aa9.18□□□□□ -0.94
CNN3-205ENST00000474409 C2orf40Q9H1Z8 148 aa9.18□□□□□ -0.94
CNN3-205ENST00000474409 MAPK8IP1Q9UQF2 711 aa9.18□□□□□ -0.94
CNN3-205ENST00000474409 PCDHB13Q9Y5F0 798 aa9.18□□□□□ -0.94
CNN3-205ENST00000474409 DNAH12Q6ZR08 3092 aa9.17□□□□□ -0.94
CNN3-205ENST00000474409 ZMYM2Q9UBW7 1377 aa9.17□□□□□ -0.94
CNN3-205ENST00000474409 A0A087WZ62 844 aa9.17□□□□□ -0.94
CNN3-205ENST00000474409 INO80B-WBP1J3KQ70 363 aa9.17□□□□□ -0.94
CNN3-205ENST00000474409 B4GALT4O60513 344 aa9.17□□□□□ -0.94
CNN3-205ENST00000474409 PRPF6O94906 941 aaKnown RBP9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms