RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 KIFAP3Q92845 792 aa20.09■□□□□ 0.81
SNRPB-203ENST00000474384 GCOM2Q9BZD3 368 aaPredicted RBP20.09■□□□□ 0.81
SNRPB-203ENST00000474384 HPSEQ9Y251 543 aa20.09■□□□□ 0.81
SNRPB-203ENST00000474384 FAM237AA0A1B0GTK4 181 aa20.08■□□□□ 0.81
SNRPB-203ENST00000474384 SFI1A8K8P3 1242 aa20.08■□□□□ 0.81
SNRPB-203ENST00000474384 RPS6KA5O75582 802 aa20.08■□□□□ 0.81
SNRPB-203ENST00000474384 KRT18P05783 430 aaKnown RBP20.08■□□□□ 0.81
SNRPB-203ENST00000474384 DARSP14868 501 aaKnown RBP20.08■□□□□ 0.81
SNRPB-203ENST00000474384 BMP8BP34820 402 aa20.08■□□□□ 0.81
SNRPB-203ENST00000474384 NDUFA8P51970 172 aa20.08■□□□□ 0.81
SNRPB-203ENST00000474384 CACNB1Q02641 598 aaPredicted RBP20.08■□□□□ 0.81
SNRPB-203ENST00000474384 MAPK7Q13164 816 aa20.08■□□□□ 0.81
SNRPB-203ENST00000474384 TFDP1Q14186 410 aa20.08■□□□□ 0.81
SNRPB-203ENST00000474384 PRPF38BQ5VTL8 546 aaKnown RBP20.08■□□□□ 0.81
SNRPB-203ENST00000474384 PSRC1Q6PGN9 363 aaPredicted RBP20.08■□□□□ 0.81
SNRPB-203ENST00000474384 DAW1Q8N136 415 aa20.08■□□□□ 0.81
SNRPB-203ENST00000474384 USP38Q8NB14 1042 aa20.08■□□□□ 0.81
SNRPB-203ENST00000474384 SEPT8Q92599 483 aa20.08■□□□□ 0.81
SNRPB-203ENST00000474384 STAMQ92783 540 aa20.08■□□□□ 0.81
SNRPB-203ENST00000474384 REEP2Q9BRK0 252 aa20.08■□□□□ 0.81
SNRPB-203ENST00000474384 TIPINQ9BVW5 301 aa20.08■□□□□ 0.81
SNRPB-203ENST00000474384 IFIH1Q9BYX4 1025 aaKnown RBP20.08■□□□□ 0.81
SNRPB-203ENST00000474384 GOLPH3LQ9H4A5 285 aa20.08■□□□□ 0.81
SNRPB-203ENST00000474384 IFT122Q9HBG6 1241 aa20.08■□□□□ 0.81
SNRPB-203ENST00000474384 PADI3Q9ULW8 664 aa20.08■□□□□ 0.81
SNRPB-203ENST00000474384 FGFR4P22455 802 aa20.07■□□□□ 0.8
SNRPB-203ENST00000474384 NFX1Q12986 1120 aaKnown RBP20.07■□□□□ 0.8
SNRPB-203ENST00000474384 PAK2Q13177 524 aa20.07■□□□□ 0.8
SNRPB-203ENST00000474384 SHHQ15465 462 aa20.07■□□□□ 0.8
SNRPB-203ENST00000474384 C9orf50Q5SZB4 431 aa20.07■□□□□ 0.8
SNRPB-203ENST00000474384 CNKSR3Q6P9H4 555 aa20.07■□□□□ 0.8
SNRPB-203ENST00000474384 OTOP2Q7RTS6 562 aa20.07■□□□□ 0.8
SNRPB-203ENST00000474384 DYMQ7RTS9 669 aa20.07■□□□□ 0.8
SNRPB-203ENST00000474384 FAM228AQ86W67 206 aa20.07■□□□□ 0.8
SNRPB-203ENST00000474384 IFT74Q96LB3 600 aa20.07■□□□□ 0.8
SNRPB-203ENST00000474384 DRC1Q96MC2 740 aa20.07■□□□□ 0.8
SNRPB-203ENST00000474384 PYM1Q9BRP8 204 aaKnown RBP20.07■□□□□ 0.8
SNRPB-203ENST00000474384 CUEDC2Q9H467 287 aa20.07■□□□□ 0.8
SNRPB-203ENST00000474384 SERTAD1Q9UHV2 236 aa20.07■□□□□ 0.8
SNRPB-203ENST00000474384 ST3GAL5Q9UNP4 418 aa20.07■□□□□ 0.8
SNRPB-203ENST00000474384 MYMKA6NI61 221 aa20.06■□□□□ 0.8
SNRPB-203ENST00000474384 LRRIQ4A6NIV6 560 aa20.06■□□□□ 0.8
SNRPB-203ENST00000474384 GADD45BO75293 160 aaPredicted RBP20.06■□□□□ 0.8
SNRPB-203ENST00000474384 SYKP43405 635 aa20.06■□□□□ 0.8
SNRPB-203ENST00000474384 PHKA2P46019 1235 aa20.06■□□□□ 0.8
SNRPB-203ENST00000474384 PTENP60484 403 aa20.06■□□□□ 0.8
SNRPB-203ENST00000474384 GIT2Q14161 759 aa20.06■□□□□ 0.8
SNRPB-203ENST00000474384 TMEM87AQ8NBN3 555 aa20.06■□□□□ 0.8
SNRPB-203ENST00000474384 INO80BQ9C086 356 aaPredicted RBP20.06■□□□□ 0.8
SNRPB-203ENST00000474384 PRO3102Q9H379 93 aa20.06■□□□□ 0.8
SNRPB-203ENST00000474384 MINDY3Q9H8M7 445 aa20.06■□□□□ 0.8
SNRPB-203ENST00000474384 ERVK-5Q9HDB9 667 aa20.06■□□□□ 0.8
SNRPB-203ENST00000474384 KBTBD4Q9NVX7 518 aa20.06■□□□□ 0.8
SNRPB-203ENST00000474384 RANBP2P49792 3224 aaKnown RBP20.06■□□□□ 0.8
SNRPB-203ENST00000474384 GPR182O15218 404 aa20.05■□□□□ 0.8
SNRPB-203ENST00000474384 ACTN1P12814 892 aa20.05■□□□□ 0.8
SNRPB-203ENST00000474384 PEX3P56589 373 aa20.05■□□□□ 0.8
SNRPB-203ENST00000474384 POU5F1BQ06416 359 aa20.05■□□□□ 0.8
SNRPB-203ENST00000474384 IKBKEQ14164 716 aa20.05■□□□□ 0.8
SNRPB-203ENST00000474384 PPP2R5AQ15172 486 aa20.05■□□□□ 0.8
SNRPB-203ENST00000474384 LONRF3Q496Y0 759 aa20.05■□□□□ 0.8
SNRPB-203ENST00000474384 CLEC17AQ6ZS10 378 aa20.05■□□□□ 0.8
SNRPB-203ENST00000474384 SRGAP1Q7Z6B7 1085 aa20.05■□□□□ 0.8
SNRPB-203ENST00000474384 CEP57L1Q8IYX8 460 aa20.05■□□□□ 0.8
SNRPB-203ENST00000474384 DDX12PQ92771 950 aa20.05■□□□□ 0.8
SNRPB-203ENST00000474384 APBB2Q92870 758 aa20.05■□□□□ 0.8
SNRPB-203ENST00000474384 TNMDQ9H2S6 317 aa20.05■□□□□ 0.8
SNRPB-203ENST00000474384 ODF2LQ9ULJ1 636 aa20.05■□□□□ 0.8
SNRPB-203ENST00000474384 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.04■□□□□ 0.8
SNRPB-203ENST00000474384 CCDC169A6NNP5 214 aa20.04■□□□□ 0.8
SNRPB-203ENST00000474384 ACTN4O43707 911 aaKnown RBP20.04■□□□□ 0.8
SNRPB-203ENST00000474384 PRPF40AO75400 957 aaKnown RBP20.04■□□□□ 0.8
SNRPB-203ENST00000474384 SLFN14P0C7P3 912 aa20.04■□□□□ 0.8
SNRPB-203ENST00000474384 NAMPTP43490 491 aa20.04■□□□□ 0.8
SNRPB-203ENST00000474384 ODR4Q5SWX8 454 aa20.04■□□□□ 0.8
SNRPB-203ENST00000474384 HERVK_113Q902F9 699 aa20.04■□□□□ 0.8
SNRPB-203ENST00000474384 DNAJC19Q96DA6 116 aa20.04■□□□□ 0.8
SNRPB-203ENST00000474384 KIFC3Q9BVG8 833 aa20.04■□□□□ 0.8
SNRPB-203ENST00000474384 TMX1Q9H3N1 280 aa20.04■□□□□ 0.8
SNRPB-203ENST00000474384 ZHX3Q9H4I2 956 aa20.04■□□□□ 0.8
SNRPB-203ENST00000474384 CXXC1Q9P0U4 656 aaPredicted RBP20.04■□□□□ 0.8
SNRPB-203ENST00000474384 COLQQ9Y215 455 aaPredicted RBP20.04■□□□□ 0.8
SNRPB-203ENST00000474384 ZBBXA8MT70 800 aa20.03■□□□□ 0.8
SNRPB-203ENST00000474384 INO80B-WBP1J3KQ70 363 aa20.03■□□□□ 0.8
SNRPB-203ENST00000474384 TBCAO75347 108 aaKnown RBP20.03■□□□□ 0.8
SNRPB-203ENST00000474384 FAM13AO94988 1023 aa20.03■□□□□ 0.8
SNRPB-203ENST00000474384 PLS3P13797 630 aa20.03■□□□□ 0.8
SNRPB-203ENST00000474384 SFPQP23246 707 aaKnown RBP eCLIP20.03■□□□□ 0.8
SNRPB-203ENST00000474384 AFMP43652 599 aa20.03■□□□□ 0.8
SNRPB-203ENST00000474384 NPTX2P47972 431 aa20.03■□□□□ 0.8
SNRPB-203ENST00000474384 AMPD3Q01432 767 aa20.03■□□□□ 0.8
SNRPB-203ENST00000474384 IFNLR1Q8IU57 520 aaPredicted RBP20.03■□□□□ 0.8
SNRPB-203ENST00000474384 GRAMD1CQ8IYS0 662 aa20.03■□□□□ 0.8
SNRPB-203ENST00000474384 MYCT1Q8N699 235 aa20.03■□□□□ 0.8
SNRPB-203ENST00000474384 DEPTORQ8TB45 409 aa20.03■□□□□ 0.8
SNRPB-203ENST00000474384 RNPC3Q96LT9 517 aaKnown RBP20.03■□□□□ 0.8
SNRPB-203ENST00000474384 NFKBIZQ9BYH8 718 aa20.03■□□□□ 0.8
SNRPB-203ENST00000474384 LRRC27Q9C0I9 530 aa20.03■□□□□ 0.8
SNRPB-203ENST00000474384 C17orf75Q9HAS0 396 aa20.03■□□□□ 0.8
SNRPB-203ENST00000474384 MAGEF1Q9HAY2 307 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms