RNA–Protein interactions for RNA: ENST00000474193.1

CCDC171-206, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 363 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-206ENST00000474193 MRPL42Q9Y6G3 142 aaKnown RBP20.77■□□□□ 0.92
CCDC171-206ENST00000474193 NLRC5Q86WI3 1866 aa20.77■□□□□ 0.92
CCDC171-206ENST00000474193 EOMESO95936 686 aa20.76■□□□□ 0.91
CCDC171-206ENST00000474193 SPIRE1Q08AE8 756 aa20.76■□□□□ 0.91
CCDC171-206ENST00000474193 DRP2Q13474 957 aa20.76■□□□□ 0.91
CCDC171-206ENST00000474193 CSPP1Q1MSJ5 1256 aa20.76■□□□□ 0.91
CCDC171-206ENST00000474193 CATSPER4Q7RTX7 472 aa20.76■□□□□ 0.91
CCDC171-206ENST00000474193 MTMR9Q96QG7 549 aa20.76■□□□□ 0.91
CCDC171-206ENST00000474193 DHX33Q9H6R0 707 aaKnown RBP20.76■□□□□ 0.91
CCDC171-206ENST00000474193 ANKEF1Q9NU02 776 aa20.76■□□□□ 0.91
CCDC171-206ENST00000474193 A0A0C4DFX4 3053 aa20.75■□□□□ 0.91
CCDC171-206ENST00000474193 COL4A4P53420 1690 aaPredicted RBP20.75■□□□□ 0.91
CCDC171-206ENST00000474193 XRCC6P12956 609 aaKnown RBP eCLIP20.75■□□□□ 0.91
CCDC171-206ENST00000474193 NCBP1Q09161 790 aaKnown RBP20.75■□□□□ 0.91
CCDC171-206ENST00000474193 ZNF174Q15697 407 aa20.75■□□□□ 0.91
CCDC171-206ENST00000474193 TTC38Q5R3I4 469 aa20.75■□□□□ 0.91
CCDC171-206ENST00000474193 FAM102BQ5T8I3 360 aa20.75■□□□□ 0.91
CCDC171-206ENST00000474193 TWF2Q6IBS0 349 aaKnown RBP20.75■□□□□ 0.91
CCDC171-206ENST00000474193 BRAPQ7Z569 592 aa20.75■□□□□ 0.91
CCDC171-206ENST00000474193 RNF169Q8NCN4 708 aa20.75■□□□□ 0.91
CCDC171-206ENST00000474193 MTRQ99707 1265 aa20.75■□□□□ 0.91
CCDC171-206ENST00000474193 HSD17B14Q9BPX1 270 aa20.75■□□□□ 0.91
CCDC171-206ENST00000474193 TMEM117Q9H0C3 514 aa20.75■□□□□ 0.91
CCDC171-206ENST00000474193 TRANK1O15050 2925 aa20.75■□□□□ 0.91
CCDC171-206ENST00000474193 A0A0U1RQF3 1178 aa20.74■□□□□ 0.91
CCDC171-206ENST00000474193 LYPLA2O95372 231 aa20.74■□□□□ 0.91
CCDC171-206ENST00000474193 OR52Z1P0C646 297 aa20.74■□□□□ 0.91
CCDC171-206ENST00000474193 SRGAP2CP0DJJ0 459 aa20.74■□□□□ 0.91
CCDC171-206ENST00000474193 FGFR4P22455 802 aa20.74■□□□□ 0.91
CCDC171-206ENST00000474193 TFF2Q03403 129 aa20.74■□□□□ 0.91
CCDC171-206ENST00000474193 TFDP1Q14186 410 aa20.74■□□□□ 0.91
CCDC171-206ENST00000474193 MXD4Q14582 209 aaPredicted RBP20.74■□□□□ 0.91
CCDC171-206ENST00000474193 EMC2Q15006 297 aa20.74■□□□□ 0.91
CCDC171-206ENST00000474193 EP400NLQ6ZTU2 488 aa20.74■□□□□ 0.91
CCDC171-206ENST00000474193 SRGAP1Q7Z6B7 1085 aa20.74■□□□□ 0.91
CCDC171-206ENST00000474193 ECHDC2Q86YB7 292 aa20.74■□□□□ 0.91
CCDC171-206ENST00000474193 PRPF31Q8WWY3 499 aaKnown RBP20.74■□□□□ 0.91
CCDC171-206ENST00000474193 TMEM143Q96AN5 459 aa20.74■□□□□ 0.91
CCDC171-206ENST00000474193 ZSCAN16Q9H4T2 348 aaPredicted RBP20.74■□□□□ 0.91
CCDC171-206ENST00000474193 WRAP73Q9P2S5 460 aaPredicted RBP20.74■□□□□ 0.91
CCDC171-206ENST00000474193 PLAGL2Q9UPG8 496 aa20.74■□□□□ 0.91
CCDC171-206ENST00000474193 GRM6O15303 877 aa20.73■□□□□ 0.91
CCDC171-206ENST00000474193 CSDE1O75534 798 aaKnown RBP20.73■□□□□ 0.91
CCDC171-206ENST00000474193 DGAT1O75907 488 aa20.73■□□□□ 0.91
CCDC171-206ENST00000474193 TECP42680 631 aa20.73■□□□□ 0.91
CCDC171-206ENST00000474193 GATMP50440 423 aa20.73■□□□□ 0.91
CCDC171-206ENST00000474193 RILPL1Q5EBL4 403 aa20.73■□□□□ 0.91
CCDC171-206ENST00000474193 FERMT3Q86UX7 667 aa20.73■□□□□ 0.91
CCDC171-206ENST00000474193 KSR1Q8IVT5 923 aa20.73■□□□□ 0.91
CCDC171-206ENST00000474193 ADAMTS19Q8TE59 1207 aa20.73■□□□□ 0.91
CCDC171-206ENST00000474193 RSPH1Q8WYR4 309 aa20.73■□□□□ 0.91
CCDC171-206ENST00000474193 RAB34Q9BZG1 259 aa20.73■□□□□ 0.91
CCDC171-206ENST00000474193 UBE2ZQ9H832 354 aaPredicted RBP20.73■□□□□ 0.91
CCDC171-206ENST00000474193 TUFT1Q9NNX1 390 aa20.73■□□□□ 0.91
CCDC171-206ENST00000474193 ALG13Q9NP73 1137 aaKnown RBP20.73■□□□□ 0.91
CCDC171-206ENST00000474193 MTMR6Q9Y217 621 aa20.73■□□□□ 0.91
CCDC171-206ENST00000474193 PIN4Q9Y237 131 aaKnown RBP20.73■□□□□ 0.91
CCDC171-206ENST00000474193 STK24Q9Y6E0 443 aa20.73■□□□□ 0.91
CCDC171-206ENST00000474193 LAG3P18627 525 aa20.72■□□□□ 0.91
CCDC171-206ENST00000474193 PHKA2P46019 1235 aa20.72■□□□□ 0.91
CCDC171-206ENST00000474193 RAB27AP51159 221 aa20.72■□□□□ 0.91
CCDC171-206ENST00000474193 LAMTOR4Q0VGL1 99 aa20.72■□□□□ 0.91
CCDC171-206ENST00000474193 THNSL1Q8IYQ7 743 aa20.72■□□□□ 0.91
CCDC171-206ENST00000474193 ZNF579Q8NAF0 562 aaKnown RBP20.72■□□□□ 0.91
CCDC171-206ENST00000474193 KLHL23Q8NBE8 558 aa20.72■□□□□ 0.91
CCDC171-206ENST00000474193 MICAL1Q8TDZ2 1067 aa20.72■□□□□ 0.91
CCDC171-206ENST00000474193 NACC1Q96RE7 527 aa20.72■□□□□ 0.91
CCDC171-206ENST00000474193 UHRF1Q96T88 793 aaPredicted RBP20.72■□□□□ 0.91
CCDC171-206ENST00000474193 TMEM60Q9H2L4 133 aa20.72■□□□□ 0.91
CCDC171-206ENST00000474193 BMP2KQ9NSY1 1161 aaPredicted RBP20.72■□□□□ 0.91
CCDC171-206ENST00000474193 TYW1Q9NV66 732 aaKnown RBP20.72■□□□□ 0.91
CCDC171-206ENST00000474193 PUF60Q9UHX1 559 aaKnown RBP20.72■□□□□ 0.91
CCDC171-206ENST00000474193 CUL9Q8IWT3 2517 aa20.72■□□□□ 0.91
CCDC171-206ENST00000474193 UNC80Q8N2C7 3258 aa20.71■□□□□ 0.91
CCDC171-206ENST00000474193 POTEMA6NI47 508 aa20.71■□□□□ 0.91
CCDC171-206ENST00000474193 ZSCAN22P10073 491 aaPredicted RBP20.71■□□□□ 0.91
CCDC171-206ENST00000474193 FGFR1P11362 822 aa20.71■□□□□ 0.91
CCDC171-206ENST00000474193 BMP1P13497 986 aa20.71■□□□□ 0.91
CCDC171-206ENST00000474193 UBE3AQ05086 875 aa20.71■□□□□ 0.91
CCDC171-206ENST00000474193 PCBP1Q15365 356 aaKnown RBP eCLIP20.71■□□□□ 0.91
CCDC171-206ENST00000474193 TCEAL5Q5H9L2 206 aa20.71■□□□□ 0.91
CCDC171-206ENST00000474193 HAUS3Q68CZ6 603 aa20.71■□□□□ 0.91
CCDC171-206ENST00000474193 LRRC43Q8N309 656 aa20.71■□□□□ 0.91
CCDC171-206ENST00000474193 RNF149Q8NC42 400 aa20.71■□□□□ 0.91
CCDC171-206ENST00000474193 PGBD4Q96DM1 585 aa20.71■□□□□ 0.91
CCDC171-206ENST00000474193 MRPL9Q9BYD2 267 aaKnown RBP20.71■□□□□ 0.91
CCDC171-206ENST00000474193 FAM50BQ9Y247 325 aa20.71■□□□□ 0.91
CCDC171-206ENST00000474193 PRUNE2Q8WUY3 3088 aa20.71■□□□□ 0.91
CCDC171-206ENST00000474193 EYSQ5T1H1 3165 aa20.7■□□□□ 0.9
CCDC171-206ENST00000474193 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP20.7■□□□□ 0.9
CCDC171-206ENST00000474193 CARNS1A5YM72 827 aa20.7■□□□□ 0.9
CCDC171-206ENST00000474193 TNFRSF10AO00220 468 aa20.7■□□□□ 0.9
CCDC171-206ENST00000474193 WNT7AO00755 349 aa20.7■□□□□ 0.9
CCDC171-206ENST00000474193 ZBTB39O15060 712 aa20.7■□□□□ 0.9
CCDC171-206ENST00000474193 ERLIN2O94905 339 aa20.7■□□□□ 0.9
CCDC171-206ENST00000474193 ITGB1P05556 798 aa20.7■□□□□ 0.9
CCDC171-206ENST00000474193 LINC00271P0C7V0 271 aa20.7■□□□□ 0.9
CCDC171-206ENST00000474193 KCNA5P22460 613 aa20.7■□□□□ 0.9
CCDC171-206ENST00000474193 KCNQ1P51787 676 aa20.7■□□□□ 0.9
CCDC171-206ENST00000474193 KRT17Q04695 432 aa20.7■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms