RNA–Protein interactions for RNA: ENST00000474160.1

SYF2-203, Transcript of SYF2 pre-mRNA splicing factor, humanhuman

TSL 2

Gene SYF2, Length 438 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYF2-203ENST00000474160 TMCO2Q7Z6W1 182 aaPredicted RBP21.04■□□□□ 0.96
SYF2-203ENST00000474160 CMTR2Q8IYT2 770 aaKnown RBP21.04■□□□□ 0.96
SYF2-203ENST00000474160 ZNF689Q96CS4 500 aaPredicted RBP21.04■□□□□ 0.96
SYF2-203ENST00000474160 FOXD4L1Q9NU39 408 aa21.04■□□□□ 0.96
SYF2-203ENST00000474160 DDX19AQ9NUU7 478 aaKnown RBP21.04■□□□□ 0.96
SYF2-203ENST00000474160 TMEM161AQ9NX61 479 aa21.04■□□□□ 0.96
SYF2-203ENST00000474160 KIAA1024Q9UPX6 916 aa21.04■□□□□ 0.96
SYF2-203ENST00000474160 PCDHB7Q9Y5E2 793 aa21.04■□□□□ 0.96
SYF2-203ENST00000474160 ADGRA3Q8IWK6 1321 aa21.04■□□□□ 0.96
SYF2-203ENST00000474160 MGEA5O60502 916 aa21.03■□□□□ 0.96
SYF2-203ENST00000474160 USO1O60763 962 aaKnown RBP21.03■□□□□ 0.96
SYF2-203ENST00000474160 EYA4O95677 639 aa21.03■□□□□ 0.96
SYF2-203ENST00000474160 FOSL2P15408 326 aa21.03■□□□□ 0.96
SYF2-203ENST00000474160 POU3F3P20264 500 aaPredicted RBP21.03■□□□□ 0.96
SYF2-203ENST00000474160 PTENP60484 403 aa21.03■□□□□ 0.96
SYF2-203ENST00000474160 PADI6Q6TGC4 694 aa21.03■□□□□ 0.96
SYF2-203ENST00000474160 RNF149Q8NC42 400 aa21.03■□□□□ 0.96
SYF2-203ENST00000474160 CHD9Q3L8U1 2897 aa21.02■□□□□ 0.96
SYF2-203ENST00000474160 LCHNA4D1U4 455 aa21.02■□□□□ 0.96
SYF2-203ENST00000474160 ECM1Q16610 540 aa21.02■□□□□ 0.96
SYF2-203ENST00000474160 CATSPER4Q7RTX7 472 aa21.02■□□□□ 0.96
SYF2-203ENST00000474160 KSR1Q8IVT5 923 aa21.02■□□□□ 0.96
SYF2-203ENST00000474160 FIBCD1Q8N539 461 aa21.02■□□□□ 0.96
SYF2-203ENST00000474160 MYLIPQ8WY64 445 aa21.02■□□□□ 0.96
SYF2-203ENST00000474160 MMTAG2Q9BU76 263 aaKnown RBP21.02■□□□□ 0.96
SYF2-203ENST00000474160 TIPINQ9BVW5 301 aa21.02■□□□□ 0.96
SYF2-203ENST00000474160 BHMT2Q9H2M3 363 aa21.02■□□□□ 0.96
SYF2-203ENST00000474160 A0A0U1RQF3 1178 aa21.01■□□□□ 0.95
SYF2-203ENST00000474160 EOMESO95936 686 aa21.01■□□□□ 0.95
SYF2-203ENST00000474160 SRGAP2CP0DJJ0 459 aa21.01■□□□□ 0.95
SYF2-203ENST00000474160 AXLP30530 894 aa21.01■□□□□ 0.95
SYF2-203ENST00000474160 RAB27AP51159 221 aa21.01■□□□□ 0.95
SYF2-203ENST00000474160 NCBP1Q09161 790 aaKnown RBP21.01■□□□□ 0.95
SYF2-203ENST00000474160 PPP2R5AQ15172 486 aa21.01■□□□□ 0.95
SYF2-203ENST00000474160 KIFAP3Q92845 792 aa21.01■□□□□ 0.95
SYF2-203ENST00000474160 CCDC51Q96ER9 411 aa21.01■□□□□ 0.95
SYF2-203ENST00000474160 CDK5RAP3Q96JB5 506 aa21.01■□□□□ 0.95
SYF2-203ENST00000474160 ZNF668Q96K58 619 aaPredicted RBP21.01■□□□□ 0.95
SYF2-203ENST00000474160 POLR3FQ9H1D9 316 aaPredicted RBP21.01■□□□□ 0.95
SYF2-203ENST00000474160 PRDM12Q9H4Q4 367 aa21.01■□□□□ 0.95
SYF2-203ENST00000474160 BMP2KQ9NSY1 1161 aaPredicted RBP21.01■□□□□ 0.95
SYF2-203ENST00000474160 AGPAT5Q9NUQ2 364 aa21.01■□□□□ 0.95
SYF2-203ENST00000474160 LMCD1Q9NZU5 365 aa21.01■□□□□ 0.95
SYF2-203ENST00000474160 KCND2Q9NZV8 630 aa21.01■□□□□ 0.95
SYF2-203ENST00000474160 MYO9BQ13459 2157 aa21■□□□□ 0.95
SYF2-203ENST00000474160 RB1P06400 928 aa21■□□□□ 0.95
SYF2-203ENST00000474160 GLRA2P23416 452 aa21■□□□□ 0.95
SYF2-203ENST00000474160 UBA7P41226 1012 aa21■□□□□ 0.95
SYF2-203ENST00000474160 BTG3Q14201 252 aaPredicted RBP21■□□□□ 0.95
SYF2-203ENST00000474160 PTPAQ15257 358 aa21■□□□□ 0.95
SYF2-203ENST00000474160 CLP1Q92989 425 aaKnown RBP21■□□□□ 0.95
SYF2-203ENST00000474160 CALML4Q96GE6 196 aa21■□□□□ 0.95
SYF2-203ENST00000474160 C2orf40Q9H1Z8 148 aa21■□□□□ 0.95
SYF2-203ENST00000474160 KCNG1Q9UIX4 513 aa21■□□□□ 0.95
SYF2-203ENST00000474160 PP2D1A8MPX8 630 aa20.99■□□□□ 0.95
SYF2-203ENST00000474160 ARHGEF15O94989 841 aa20.99■□□□□ 0.95
SYF2-203ENST00000474160 CAPSQ13938 189 aa20.99■□□□□ 0.95
SYF2-203ENST00000474160 ATL3Q6DD88 541 aa20.99■□□□□ 0.95
SYF2-203ENST00000474160 CABP7Q86V35 215 aa20.99■□□□□ 0.95
SYF2-203ENST00000474160 ECHDC2Q86YB7 292 aa20.99■□□□□ 0.95
SYF2-203ENST00000474160 ARNTL2Q8WYA1 636 aa20.99■□□□□ 0.95
SYF2-203ENST00000474160 PRIMPOLQ96LW4 560 aa20.99■□□□□ 0.95
SYF2-203ENST00000474160 ZNF396Q96N95 335 aaPredicted RBP20.99■□□□□ 0.95
SYF2-203ENST00000474160 C17orf75Q9HAS0 396 aa20.99■□□□□ 0.95
SYF2-203ENST00000474160 PIN4Q9Y237 131 aaKnown RBP20.99■□□□□ 0.95
SYF2-203ENST00000474160 SRPRBQ9Y5M8 271 aaKnown RBP20.99■□□□□ 0.95
SYF2-203ENST00000474160 PHLPP2Q6ZVD8 1323 aa20.99■□□□□ 0.95
SYF2-203ENST00000474160 CDH23Q9H251 3354 aa20.99■□□□□ 0.95
SYF2-203ENST00000474160 C5orf67F2Z3F1 127 aa20.98■□□□□ 0.95
SYF2-203ENST00000474160 GTPBP6O43824 516 aaPredicted RBP20.98■□□□□ 0.95
SYF2-203ENST00000474160 ZNF623O75123 536 aa20.98■□□□□ 0.95
SYF2-203ENST00000474160 ERLIN2O94905 339 aa20.98■□□□□ 0.95
SYF2-203ENST00000474160 CDC25AP30304 524 aa20.98■□□□□ 0.95
SYF2-203ENST00000474160 NAMPTP43490 491 aa20.98■□□□□ 0.95
SYF2-203ENST00000474160 NASPP49321 788 aaPredicted RBP20.98■□□□□ 0.95
SYF2-203ENST00000474160 BECN1Q14457 450 aa20.98■□□□□ 0.95
SYF2-203ENST00000474160 TMEM119Q4V9L6 283 aa20.98■□□□□ 0.95
SYF2-203ENST00000474160 NAALADL2Q58DX5 795 aa20.98■□□□□ 0.95
SYF2-203ENST00000474160 FAM102BQ5T8I3 360 aa20.98■□□□□ 0.95
SYF2-203ENST00000474160 CDCA2Q69YH5 1023 aaPredicted RBP20.98■□□□□ 0.95
SYF2-203ENST00000474160 TWF2Q6IBS0 349 aaKnown RBP20.98■□□□□ 0.95
SYF2-203ENST00000474160 ZBTB8OSQ8IWT0 167 aa20.98■□□□□ 0.95
SYF2-203ENST00000474160 ASAP3Q8TDY4 903 aa20.98■□□□□ 0.95
SYF2-203ENST00000474160 IFT74Q96LB3 600 aa20.98■□□□□ 0.95
SYF2-203ENST00000474160 PLVAPQ9BX97 442 aa20.98■□□□□ 0.95
SYF2-203ENST00000474160 CCSER1Q9C0I3 900 aa20.98■□□□□ 0.95
SYF2-203ENST00000474160 CLIC4Q9Y696 253 aa20.98■□□□□ 0.95
SYF2-203ENST00000474160 CHD7Q9P2D1 2997 aa20.97■□□□□ 0.95
SYF2-203ENST00000474160 RALGAPA2Q2PPJ7 1873 aa20.97■□□□□ 0.95
SYF2-203ENST00000474160 A0A087WWV3 80 aa20.97■□□□□ 0.95
SYF2-203ENST00000474160 CARNS1A5YM72 827 aa20.97■□□□□ 0.95
SYF2-203ENST00000474160 ZSCAN22P10073 491 aaPredicted RBP20.97■□□□□ 0.95
SYF2-203ENST00000474160 FGFR4P22455 802 aa20.97■□□□□ 0.95
SYF2-203ENST00000474160 SLC39A14Q15043 492 aa20.97■□□□□ 0.95
SYF2-203ENST00000474160 TMEM192Q8IY95 271 aa20.97■□□□□ 0.95
SYF2-203ENST00000474160 SYT2Q8N9I0 419 aaPredicted RBP20.97■□□□□ 0.95
SYF2-203ENST00000474160 CNNM3Q8NE01 707 aa20.97■□□□□ 0.95
SYF2-203ENST00000474160 FBXO22Q8NEZ5 403 aa20.97■□□□□ 0.95
SYF2-203ENST00000474160 DRC1Q96MC2 740 aa20.97■□□□□ 0.95
SYF2-203ENST00000474160 TMEM117Q9H0C3 514 aa20.97■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms