RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 GPR32O75388 356 aa5.84□□□□□ -1.47
SNRNP40-204ENST00000474025 C22orf31O95567 290 aa5.84□□□□□ -1.47
SNRNP40-204ENST00000474025 VTNP04004 478 aa5.84□□□□□ -1.47
SNRNP40-204ENST00000474025 WEE2P0C1S8 567 aa5.84□□□□□ -1.47
SNRNP40-204ENST00000474025 RXRAP19793 462 aa5.84□□□□□ -1.47
SNRNP40-204ENST00000474025 MTHFRP42898 656 aa5.84□□□□□ -1.47
SNRNP40-204ENST00000474025 KRT17Q04695 432 aa5.84□□□□□ -1.47
SNRNP40-204ENST00000474025 AAMPQ13685 434 aa5.84□□□□□ -1.47
SNRNP40-204ENST00000474025 PUM1Q14671 1186 aaKnown RBP eCLIP5.84□□□□□ -1.47
SNRNP40-204ENST00000474025 SMC1AQ14683 1233 aaKnown RBP5.84□□□□□ -1.47
SNRNP40-204ENST00000474025 E2F4Q16254 413 aa5.84□□□□□ -1.47
SNRNP40-204ENST00000474025 CEP55Q53EZ4 464 aa5.84□□□□□ -1.47
SNRNP40-204ENST00000474025 ZNF484Q5JVG2 852 aa5.84□□□□□ -1.47
SNRNP40-204ENST00000474025 CLLU1OSQ5K130 101 aa5.84□□□□□ -1.47
SNRNP40-204ENST00000474025 ODR4Q5SWX8 454 aa5.84□□□□□ -1.47
SNRNP40-204ENST00000474025 KIAA1841Q6NSI8 718 aa5.84□□□□□ -1.47
SNRNP40-204ENST00000474025 PDXDC2PQ6P474 469 aa5.84□□□□□ -1.47
SNRNP40-204ENST00000474025 ABHD15Q6UXT9 468 aa5.84□□□□□ -1.47
SNRNP40-204ENST00000474025 TMTC3Q6ZXV5 915 aa5.84□□□□□ -1.47
SNRNP40-204ENST00000474025 HEATR3Q7Z4Q2 680 aa5.84□□□□□ -1.47
SNRNP40-204ENST00000474025 ECHDC2Q86YB7 292 aa5.84□□□□□ -1.47
SNRNP40-204ENST00000474025 ZDHHC14Q8IZN3 488 aa5.84□□□□□ -1.47
SNRNP40-204ENST00000474025 ADSSL1Q8N142 457 aa5.84□□□□□ -1.47
SNRNP40-204ENST00000474025 SLC39A11Q8N1S5 342 aa5.84□□□□□ -1.47
SNRNP40-204ENST00000474025 TDRD5Q8NAT2 981 aaKnown RBP5.84□□□□□ -1.47
SNRNP40-204ENST00000474025 ANKK1Q8NFD2 765 aa5.84□□□□□ -1.47
SNRNP40-204ENST00000474025 PGBD1Q96JS3 809 aa5.84□□□□□ -1.47
SNRNP40-204ENST00000474025 ZNF558Q96NG5 402 aa5.84□□□□□ -1.47
SNRNP40-204ENST00000474025 RWDD1Q9H446 243 aaPredicted RBP5.84□□□□□ -1.47
SNRNP40-204ENST00000474025 SPG21Q9NZD8 308 aa5.84□□□□□ -1.47
SNRNP40-204ENST00000474025 KIAA1468Q9P260 1216 aa5.84□□□□□ -1.47
SNRNP40-204ENST00000474025 USTQ9Y2C2 406 aa5.84□□□□□ -1.47
SNRNP40-204ENST00000474025 SPEGQ15772 3267 aa5.84□□□□□ -1.48
SNRNP40-204ENST00000474025 DENND4AQ7Z401 1863 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 EVPLQ92817 2033 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 DDX39AO00148 427 aaKnown RBP5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 BACH1O14867 736 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 DHX15O43143 795 aaKnown RBP5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 SGSM2O43147 1006 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 PRC1O43663 620 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 CLASP2O75122 1294 aaKnown RBP5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 EOMESO95936 686 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 ATP4AP20648 1035 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 CHMLP26374 656 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 SREBF1P36956 1147 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 CLCN3P51790 818 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 RARS2Q5T160 578 aaKnown RBP5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 TTC22Q5TAA0 569 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 FAM160B1Q5W0V3 765 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 WWC2Q6AWC2 1192 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 KANK3Q6NY19 840 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 CASC1Q6TDU7 716 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 NFXL1Q6ZNB6 911 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 NYAP1Q6ZVC0 841 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 NIPA1Q7RTP0 329 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 ZNF598Q86UK7 904 aaKnown RBP5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 TMEM173Q86WV6 379 aaPredicted RBP5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 RAB11FIP4Q86YS3 637 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 TEX2Q8IWB9 1127 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 CCDC105Q8IYK2 499 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 ABI1Q8IZP0 508 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 CCDC82Q8N4S0 544 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 METTL13Q8N6R0 699 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 LINC01465Q8N7H1 131 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 C12orf76Q8N812 135 aaPredicted RBP5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 FEZF2Q8TBJ5 459 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 RUFY2Q8WXA3 655 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 DDX12PQ92771 950 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 MAP4K1Q92918 833 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 BORCS6Q96GS4 357 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 MTA3Q9BTC8 594 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 ANO3Q9BYT9 981 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 ZBP1Q9H171 429 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 ADAMTS10Q9H324 1103 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 MFSD1Q9H3U5 465 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 RIC8AQ9NPQ8 531 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 ZNF302Q9NR11 478 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 DZANK1Q9NVP4 752 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 LIMD1Q9UGP4 676 aa5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 MAFBQ9Y5Q3 323 aaPredicted RBP5.83□□□□□ -1.48
SNRNP40-204ENST00000474025 CNTNAP5Q8WYK1 1306 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 IGLV3-22A0A075B6J6 115 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 A0A0U1RQF3 1178 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 CCDC69A6NI79 296 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 NT5C1B-RDH14C9J2C7 533 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 FAM86B1E9PN63 330 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 IPO5O00410 1097 aaKnown RBP5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 PI15O43692 258 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 CXCL14O95715 111 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 FOSP01100 380 aaPredicted RBP5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 FAM86B2P0C5J1 330 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 CALM1P0DP23 149 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 CALM2P0DP24 149 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 CALM3P0DP25 149 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 EPCAMP16422 314 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 NPR3P17342 541 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 AOC1P19801 751 aa5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 EIF4BP23588 611 aaKnown RBP5.82□□□□□ -1.48
SNRNP40-204ENST00000474025 MCM5P33992 734 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms