RNA–Protein interactions for RNA: ENST00000473961.5

BRCA1-212, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 2

Gene BRCA1, Length 958 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-212ENST00000473961 MAPKAPK2P49137 400 aa5.36□□□□□ -1.55
BRCA1-212ENST00000473961 NRG3P56975 720 aa5.36□□□□□ -1.55
BRCA1-212ENST00000473961 NKX3-2P78367 333 aa5.36□□□□□ -1.55
BRCA1-212ENST00000473961 MAP3K12Q12852 859 aa5.36□□□□□ -1.55
BRCA1-212ENST00000473961 NFIXQ14938 502 aa5.36□□□□□ -1.55
BRCA1-212ENST00000473961 RAB3GAP1Q15042 981 aa5.36□□□□□ -1.55
BRCA1-212ENST00000473961 COBLL1Q53SF7 1204 aa5.36□□□□□ -1.55
BRCA1-212ENST00000473961 PITRM1Q5JRX3 1037 aa5.36□□□□□ -1.55
BRCA1-212ENST00000473961 ATAT1Q5SQI0 421 aa5.36□□□□□ -1.55
BRCA1-212ENST00000473961 PRAMEF18Q5VWM3 479 aa5.36□□□□□ -1.55
BRCA1-212ENST00000473961 VASNQ6EMK4 673 aa5.36□□□□□ -1.55
BRCA1-212ENST00000473961 ZC3H14Q6PJT7 736 aaKnown RBP5.36□□□□□ -1.55
BRCA1-212ENST00000473961 KCNK18Q7Z418 384 aa5.36□□□□□ -1.55
BRCA1-212ENST00000473961 CDYL2Q8N8U2 506 aa5.36□□□□□ -1.55
BRCA1-212ENST00000473961 FATE1Q969F0 183 aa5.36□□□□□ -1.55
BRCA1-212ENST00000473961 C1GALT1C1Q96EU7 318 aa5.36□□□□□ -1.55
BRCA1-212ENST00000473961 TAAR9Q96RI9 348 aa5.36□□□□□ -1.55
BRCA1-212ENST00000473961 KCTD10Q9H3F6 313 aa5.36□□□□□ -1.55
BRCA1-212ENST00000473961 INCENPQ9NQS7 918 aa5.36□□□□□ -1.55
BRCA1-212ENST00000473961 ANLNQ9NQW6 1124 aa5.36□□□□□ -1.55
BRCA1-212ENST00000473961 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.35□□□□□ -1.55
BRCA1-212ENST00000473961 OR14I1A6ND48 311 aa5.35□□□□□ -1.55
BRCA1-212ENST00000473961 NUDT19A8MXV4 375 aa5.35□□□□□ -1.55
BRCA1-212ENST00000473961 FAM227AF5H4B4 570 aa5.35□□□□□ -1.55
BRCA1-212ENST00000473961 ETV2O00321 342 aaPredicted RBP5.35□□□□□ -1.55
BRCA1-212ENST00000473961 LDHAP00338 332 aaKnown RBP5.35□□□□□ -1.55
BRCA1-212ENST00000473961 BMP7P18075 431 aa5.35□□□□□ -1.55
BRCA1-212ENST00000473961 C5AR1P21730 350 aa5.35□□□□□ -1.55
BRCA1-212ENST00000473961 GLDCP23378 1020 aa5.35□□□□□ -1.55
BRCA1-212ENST00000473961 APEX1P27695 318 aaKnown RBP5.35□□□□□ -1.55
BRCA1-212ENST00000473961 IL12RB1P42701 662 aa5.35□□□□□ -1.55
BRCA1-212ENST00000473961 LGALS4P56470 323 aa5.35□□□□□ -1.55
BRCA1-212ENST00000473961 NFATC3Q12968 1075 aa5.35□□□□□ -1.55
BRCA1-212ENST00000473961 KIR3DS1Q14943 382 aa5.35□□□□□ -1.55
BRCA1-212ENST00000473961 ADGRF1Q5T601 910 aa5.35□□□□□ -1.55
BRCA1-212ENST00000473961 CD276Q5ZPR3 534 aa5.35□□□□□ -1.55
BRCA1-212ENST00000473961 PPP4R3AQ6IN85 833 aa5.35□□□□□ -1.55
BRCA1-212ENST00000473961 USP45Q70EL2 814 aa5.35□□□□□ -1.55
BRCA1-212ENST00000473961 MIGA2Q7L4E1 593 aa5.35□□□□□ -1.55
BRCA1-212ENST00000473961 KANSL1Q7Z3B3 1105 aa5.35□□□□□ -1.55
BRCA1-212ENST00000473961 MIB1Q86YT6 1006 aa5.35□□□□□ -1.55
BRCA1-212ENST00000473961 ALG3Q92685 438 aa5.35□□□□□ -1.55
BRCA1-212ENST00000473961 HPS3Q969F9 1004 aa5.35□□□□□ -1.55
BRCA1-212ENST00000473961 TIFAQ96CG3 184 aa5.35□□□□□ -1.55
BRCA1-212ENST00000473961 FOXRED1Q96CU9 486 aaPredicted RBP5.35□□□□□ -1.55
BRCA1-212ENST00000473961 HIST1H2AHQ96KK5 128 aa5.35□□□□□ -1.55
BRCA1-212ENST00000473961 TNIP3Q96KP6 325 aa5.35□□□□□ -1.55
BRCA1-212ENST00000473961 KCNC2Q96PR1 638 aa5.35□□□□□ -1.55
BRCA1-212ENST00000473961 HIST1H2AJQ99878 128 aa5.35□□□□□ -1.55
BRCA1-212ENST00000473961 SLC12A5Q9H2X9 1139 aa5.35□□□□□ -1.55
BRCA1-212ENST00000473961 C19orf44Q9H6X5 657 aa5.35□□□□□ -1.55
BRCA1-212ENST00000473961 PCDH18Q9HCL0 1135 aa5.35□□□□□ -1.55
BRCA1-212ENST00000473961 UCKL1Q9NWZ5 548 aa5.35□□□□□ -1.55
BRCA1-212ENST00000473961 RTEL1Q9NZ71 1219 aa5.35□□□□□ -1.55
BRCA1-212ENST00000473961 DPP7Q9UHL4 492 aa5.35□□□□□ -1.55
BRCA1-212ENST00000473961 YBX2Q9Y2T7 364 aaKnown RBP5.35□□□□□ -1.55
BRCA1-212ENST00000473961 PCDHB6Q9Y5E3 794 aa5.35□□□□□ -1.55
BRCA1-212ENST00000473961 MYPNQ86TC9 1320 aa5.34□□□□□ -1.55
BRCA1-212ENST00000473961 ELL2O00472 640 aaPredicted RBP5.34□□□□□ -1.55
BRCA1-212ENST00000473961 LPLP06858 475 aa5.34□□□□□ -1.55
BRCA1-212ENST00000473961 PFKMP08237 780 aa5.34□□□□□ -1.55
BRCA1-212ENST00000473961 FAM193AP78312 1265 aa5.34□□□□□ -1.55
BRCA1-212ENST00000473961 PPARAQ07869 468 aa5.34□□□□□ -1.55
BRCA1-212ENST00000473961 MORC3Q14149 939 aa5.34□□□□□ -1.55
BRCA1-212ENST00000473961 GRM3Q14832 879 aa5.34□□□□□ -1.55
BRCA1-212ENST00000473961 MYBPC3Q14896 1274 aa5.34□□□□□ -1.55
BRCA1-212ENST00000473961 ZRSR2Q15696 482 aaKnown RBP5.34□□□□□ -1.55
BRCA1-212ENST00000473961 PGS1Q32NB8 556 aa5.34□□□□□ -1.55
BRCA1-212ENST00000473961 MUM1L1Q5H9M0 696 aa5.34□□□□□ -1.55
BRCA1-212ENST00000473961 ZBTB41Q5SVQ8 909 aa5.34□□□□□ -1.55
BRCA1-212ENST00000473961 THEMIS2Q5TEJ8 643 aa5.34□□□□□ -1.55
BRCA1-212ENST00000473961 KLHDC10Q6PID8 442 aa5.34□□□□□ -1.55
BRCA1-212ENST00000473961 TEPPQ6URK8 271 aa5.34□□□□□ -1.55
BRCA1-212ENST00000473961 B3GNT9Q6UX72 402 aa5.34□□□□□ -1.55
BRCA1-212ENST00000473961 DPP8Q6V1X1 898 aaPredicted RBP5.34□□□□□ -1.55
BRCA1-212ENST00000473961 RPTNQ6XPR3 784 aa5.34□□□□□ -1.55
BRCA1-212ENST00000473961 TSHZ1Q6ZSZ6 1077 aa5.34□□□□□ -1.55
BRCA1-212ENST00000473961 CHST15Q7LFX5 561 aaPredicted RBP5.34□□□□□ -1.55
BRCA1-212ENST00000473961 DENND1CQ8IV53 801 aa5.34□□□□□ -1.55
BRCA1-212ENST00000473961 GLB1L2Q8IW92 636 aa5.34□□□□□ -1.55
BRCA1-212ENST00000473961 GRAMD1CQ8IYS0 662 aa5.34□□□□□ -1.55
BRCA1-212ENST00000473961 FAM43AQ8N2R8 423 aa5.34□□□□□ -1.55
BRCA1-212ENST00000473961 CXorf38Q8TB03 319 aa5.34□□□□□ -1.55
BRCA1-212ENST00000473961 IGDCC4Q8TDY8 1250 aa5.34□□□□□ -1.55
BRCA1-212ENST00000473961 DIS3LQ8TF46 1054 aaKnown RBP5.34□□□□□ -1.55
BRCA1-212ENST00000473961 MVB12AQ96EY5 273 aa5.34□□□□□ -1.55
BRCA1-212ENST00000473961 BORCS6Q96GS4 357 aa5.34□□□□□ -1.55
BRCA1-212ENST00000473961 WRNIP1Q96S55 665 aa5.34□□□□□ -1.55
BRCA1-212ENST00000473961 ADI1Q9BV57 179 aa5.34□□□□□ -1.55
BRCA1-212ENST00000473961 KMT5AQ9NQR1 393 aa5.34□□□□□ -1.55
BRCA1-212ENST00000473961 GALNT8Q9NY28 637 aa5.34□□□□□ -1.55
BRCA1-212ENST00000473961 KCMF1Q9P0J7 381 aa5.34□□□□□ -1.55
BRCA1-212ENST00000473961 BTBD7Q9P203 1132 aa5.34□□□□□ -1.55
BRCA1-212ENST00000473961 PRSS50Q9UI38 385 aa5.34□□□□□ -1.55
BRCA1-212ENST00000473961 DENND2AQ9ULE3 1009 aa5.34□□□□□ -1.55
BRCA1-212ENST00000473961 CDY2AQ9Y6F7 541 aa5.34□□□□□ -1.55
BRCA1-212ENST00000473961 H3BML4 177 aa5.33□□□□□ -1.56
BRCA1-212ENST00000473961 SUV39H1O43463 412 aa5.33□□□□□ -1.56
BRCA1-212ENST00000473961 PCDH8O95206 1070 aa5.33□□□□□ -1.56
BRCA1-212ENST00000473961 ZBED1O96006 694 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms