RNA–Protein interactions for RNA: ENST00000473829.1

PTCD3-210, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 587 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-210ENST00000473829 MUTP22033 750 aa21.07■□□□□ 0.96
PTCD3-210ENST00000473829 GATMP50440 423 aa21.07■□□□□ 0.96
PTCD3-210ENST00000473829 ERVK-21P61565 698 aa21.07■□□□□ 0.96
PTCD3-210ENST00000473829 ARL6IP4Q66PJ3 421 aaKnown RBP21.07■□□□□ 0.96
PTCD3-210ENST00000473829 C1orf112Q9NSG2 853 aa21.07■□□□□ 0.96
PTCD3-210ENST00000473829 DDX19AQ9NUU7 478 aaKnown RBP21.07■□□□□ 0.96
PTCD3-210ENST00000473829 KIAA1024Q9UPX6 916 aa21.07■□□□□ 0.96
PTCD3-210ENST00000473829 CLIC4Q9Y696 253 aa21.07■□□□□ 0.96
PTCD3-210ENST00000473829 LINC00271P0C7V0 271 aa21.06■□□□□ 0.96
PTCD3-210ENST00000473829 ARL2P36404 184 aa21.06■□□□□ 0.96
PTCD3-210ENST00000473829 GRIN1Q05586 938 aa21.06■□□□□ 0.96
PTCD3-210ENST00000473829 CAPSQ13938 189 aa21.06■□□□□ 0.96
PTCD3-210ENST00000473829 KRT79Q5XKE5 535 aa21.06■□□□□ 0.96
PTCD3-210ENST00000473829 SLC24A5Q71RS6 500 aa21.06■□□□□ 0.96
PTCD3-210ENST00000473829 MAEAQ7L5Y9 396 aa21.06■□□□□ 0.96
PTCD3-210ENST00000473829 KCNK18Q7Z418 384 aa21.06■□□□□ 0.96
PTCD3-210ENST00000473829 RNF149Q8NC42 400 aa21.06■□□□□ 0.96
PTCD3-210ENST00000473829 TGS1Q96RS0 853 aaKnown RBP21.06■□□□□ 0.96
PTCD3-210ENST00000473829 POLR3FQ9H1D9 316 aaPredicted RBP21.06■□□□□ 0.96
PTCD3-210ENST00000473829 ARHGEF35A5YM69 484 aa21.05■□□□□ 0.96
PTCD3-210ENST00000473829 E9PMD0 336 aa21.05■□□□□ 0.96
PTCD3-210ENST00000473829 SFPQP23246 707 aaKnown RBP eCLIP21.05■□□□□ 0.96
PTCD3-210ENST00000473829 GLRA2P23416 452 aa21.05■□□□□ 0.96
PTCD3-210ENST00000473829 FAM189BP81408 668 aa21.05■□□□□ 0.96
PTCD3-210ENST00000473829 PTPAQ15257 358 aa21.05■□□□□ 0.96
PTCD3-210ENST00000473829 PADI6Q6TGC4 694 aa21.05■□□□□ 0.96
PTCD3-210ENST00000473829 SPRYD3Q8NCJ5 442 aa21.05■□□□□ 0.96
PTCD3-210ENST00000473829 GDPD5Q8WTR4 605 aa21.05■□□□□ 0.96
PTCD3-210ENST00000473829 PNMA5Q96PV4 448 aa21.05■□□□□ 0.96
PTCD3-210ENST00000473829 GAS2L1Q99501 681 aaPredicted RBP21.05■□□□□ 0.96
PTCD3-210ENST00000473829 BHMT2Q9H2M3 363 aa21.05■□□□□ 0.96
PTCD3-210ENST00000473829 STK24Q9Y6E0 443 aa21.05■□□□□ 0.96
PTCD3-210ENST00000473829 ASAP2O43150 1006 aa21.04■□□□□ 0.96
PTCD3-210ENST00000473829 LPXNO60711 386 aa21.04■□□□□ 0.96
PTCD3-210ENST00000473829 STAG3L1P0CL83 205 aa21.04■□□□□ 0.96
PTCD3-210ENST00000473829 MXD4Q14582 209 aaPredicted RBP21.04■□□□□ 0.96
PTCD3-210ENST00000473829 FAM43BQ6ZT52 329 aaPredicted RBP21.04■□□□□ 0.96
PTCD3-210ENST00000473829 MAFAQ8NHW3 353 aaPredicted RBP21.04■□□□□ 0.96
PTCD3-210ENST00000473829 INO80BQ9C086 356 aaPredicted RBP21.04■□□□□ 0.96
PTCD3-210ENST00000473829 LRFN2Q9ULH4 789 aa21.04■□□□□ 0.96
PTCD3-210ENST00000473829 BMP15O95972 392 aa21.03■□□□□ 0.96
PTCD3-210ENST00000473829 HSP90AA1P07900 732 aaKnown RBP21.03■□□□□ 0.96
PTCD3-210ENST00000473829 ZSCAN20P17040 1043 aaPredicted RBP21.03■□□□□ 0.96
PTCD3-210ENST00000473829 CYP11B2P19099 503 aa21.03■□□□□ 0.96
PTCD3-210ENST00000473829 PTENP60484 403 aa21.03■□□□□ 0.96
PTCD3-210ENST00000473829 GRB10Q13322 594 aa21.03■□□□□ 0.96
PTCD3-210ENST00000473829 PAN2Q504Q3 1202 aaKnown RBP21.03■□□□□ 0.96
PTCD3-210ENST00000473829 HYIQ5T013 277 aa21.03■□□□□ 0.96
PTCD3-210ENST00000473829 CATSPER4Q7RTX7 472 aa21.03■□□□□ 0.96
PTCD3-210ENST00000473829 SRGAP1Q7Z6B7 1085 aa21.03■□□□□ 0.96
PTCD3-210ENST00000473829 MCPH1Q8NEM0 835 aa21.03■□□□□ 0.96
PTCD3-210ENST00000473829 BSNDQ8WZ55 320 aa21.03■□□□□ 0.96
PTCD3-210ENST00000473829 RNF19AQ9NV58 838 aa21.03■□□□□ 0.96
PTCD3-210ENST00000473829 TMEM161AQ9NX61 479 aa21.03■□□□□ 0.96
PTCD3-210ENST00000473829 PIN4Q9Y237 131 aaKnown RBP21.03■□□□□ 0.96
PTCD3-210ENST00000473829 PCDHB7Q9Y5E2 793 aa21.03■□□□□ 0.96
PTCD3-210ENST00000473829 FGFR1P11362 822 aa21.02■□□□□ 0.96
PTCD3-210ENST00000473829 ATF7P17544 494 aaPredicted RBP21.02■□□□□ 0.96
PTCD3-210ENST00000473829 IGFBP4P22692 258 aa21.02■□□□□ 0.96
PTCD3-210ENST00000473829 PHKA2P46019 1235 aa21.02■□□□□ 0.96
PTCD3-210ENST00000473829 PKP1Q13835 747 aa21.02■□□□□ 0.96
PTCD3-210ENST00000473829 BTG3Q14201 252 aaPredicted RBP21.02■□□□□ 0.96
PTCD3-210ENST00000473829 ZRSR1Q15695 479 aaKnown RBP21.02■□□□□ 0.96
PTCD3-210ENST00000473829 EPC2Q52LR7 807 aa21.02■□□□□ 0.96
PTCD3-210ENST00000473829 FAM102BQ5T8I3 360 aa21.02■□□□□ 0.96
PTCD3-210ENST00000473829 ECHDC2Q86YB7 292 aa21.02■□□□□ 0.96
PTCD3-210ENST00000473829 IFNLR1Q8IU57 520 aaPredicted RBP21.02■□□□□ 0.96
PTCD3-210ENST00000473829 CMTR2Q8IYT2 770 aaKnown RBP21.02■□□□□ 0.96
PTCD3-210ENST00000473829 FIBCD1Q8N539 461 aa21.02■□□□□ 0.96
PTCD3-210ENST00000473829 USP28Q96RU2 1077 aa21.02■□□□□ 0.96
PTCD3-210ENST00000473829 PLIN2Q99541 437 aa21.02■□□□□ 0.96
PTCD3-210ENST00000473829 POLD4Q9HCU8 107 aa21.02■□□□□ 0.96
PTCD3-210ENST00000473829 AGPAT5Q9NUQ2 364 aa21.02■□□□□ 0.96
PTCD3-210ENST00000473829 MRPL42Q9Y6G3 142 aaKnown RBP21.02■□□□□ 0.96
PTCD3-210ENST00000473829 ATG2AQ2TAZ0 1938 aa21.02■□□□□ 0.95
PTCD3-210ENST00000473829 UNC80Q8N2C7 3258 aa21.02■□□□□ 0.95
PTCD3-210ENST00000473829 EYA4O95677 639 aa21.01■□□□□ 0.95
PTCD3-210ENST00000473829 CEBPZQ03701 1054 aaKnown RBP21.01■□□□□ 0.95
PTCD3-210ENST00000473829 MBTD1Q05BQ5 628 aa21.01■□□□□ 0.95
PTCD3-210ENST00000473829 TFDP1Q14186 410 aa21.01■□□□□ 0.95
PTCD3-210ENST00000473829 FOXD4L5Q5VV16 416 aaPredicted RBP21.01■□□□□ 0.95
PTCD3-210ENST00000473829 TMEM192Q8IY95 271 aa21.01■□□□□ 0.95
PTCD3-210ENST00000473829 FBXO22Q8NEZ5 403 aa21.01■□□□□ 0.95
PTCD3-210ENST00000473829 LRRC15Q8TF66 581 aa21.01■□□□□ 0.95
PTCD3-210ENST00000473829 FOXD4L4Q8WXT5 416 aaPredicted RBP21.01■□□□□ 0.95
PTCD3-210ENST00000473829 ZSCAN16Q9H4T2 348 aaPredicted RBP21.01■□□□□ 0.95
PTCD3-210ENST00000473829 ELAC1Q9H777 363 aaKnown RBP21.01■□□□□ 0.95
PTCD3-210ENST00000473829 CHST12Q9NRB3 414 aa21.01■□□□□ 0.95
PTCD3-210ENST00000473829 HCSTQ9UBK5 93 aa21.01■□□□□ 0.95
PTCD3-210ENST00000473829 DNM3Q9UQ16 869 aa21.01■□□□□ 0.95
PTCD3-210ENST00000473829 PRRC2BQ5JSZ5 2229 aaKnown RBP21■□□□□ 0.95
PTCD3-210ENST00000473829 A0A0U1RQF3 1178 aa21■□□□□ 0.95
PTCD3-210ENST00000473829 MARCKSP29966 332 aaPredicted RBP21■□□□□ 0.95
PTCD3-210ENST00000473829 HOXA11P31270 313 aaPredicted RBP21■□□□□ 0.95
PTCD3-210ENST00000473829 POU5F1BQ06416 359 aa21■□□□□ 0.95
PTCD3-210ENST00000473829 TMEM119Q4V9L6 283 aa21■□□□□ 0.95
PTCD3-210ENST00000473829 ZNF598Q86UK7 904 aaKnown RBP21■□□□□ 0.95
PTCD3-210ENST00000473829 CABP7Q86V35 215 aa21■□□□□ 0.95
PTCD3-210ENST00000473829 CLP1Q92989 425 aaKnown RBP21■□□□□ 0.95
PTCD3-210ENST00000473829 AK8Q96MA6 479 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms