RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 DGKIO75912 1065 aa14.5□□□□□ -0.09
SHROOM3-204ENST00000473602 VTNP04004 478 aa14.5□□□□□ -0.09
SHROOM3-204ENST00000473602 DNAJB1P25685 340 aa14.5□□□□□ -0.09
SHROOM3-204ENST00000473602 U2AF2P26368 475 aaKnown RBP eCLIP14.5□□□□□ -0.09
SHROOM3-204ENST00000473602 MCM7P33993 719 aa14.5□□□□□ -0.09
SHROOM3-204ENST00000473602 DNM2P50570 870 aa14.5□□□□□ -0.09
SHROOM3-204ENST00000473602 PTPN5P54829 565 aa14.5□□□□□ -0.09
SHROOM3-204ENST00000473602 KIZQ2M2Z5 673 aa14.5□□□□□ -0.09
SHROOM3-204ENST00000473602 MTERF2Q49AM1 385 aa14.5□□□□□ -0.09
SHROOM3-204ENST00000473602 ANO5Q75V66 913 aa14.5□□□□□ -0.09
SHROOM3-204ENST00000473602 CEP89Q96ST8 783 aa14.5□□□□□ -0.09
SHROOM3-204ENST00000473602 LXNQ9BS40 222 aa14.5□□□□□ -0.09
SHROOM3-204ENST00000473602 ZSWIM4Q9H7M6 989 aa14.5□□□□□ -0.09
SHROOM3-204ENST00000473602 ERVK-5Q9HDB9 667 aa14.5□□□□□ -0.09
SHROOM3-204ENST00000473602 CLEC1BQ9P126 229 aa14.5□□□□□ -0.09
SHROOM3-204ENST00000473602 AKT3Q9Y243 479 aa14.5□□□□□ -0.09
SHROOM3-204ENST00000473602 GINS2Q9Y248 185 aa14.5□□□□□ -0.09
SHROOM3-204ENST00000473602 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.5□□□□□ -0.09
SHROOM3-204ENST00000473602 DDX11L8A8MPP1 907 aa14.49□□□□□ -0.09
SHROOM3-204ENST00000473602 WNT7AO00755 349 aa14.49□□□□□ -0.09
SHROOM3-204ENST00000473602 MAFO75444 373 aaPredicted RBP14.49□□□□□ -0.09
SHROOM3-204ENST00000473602 NLRP11P59045 1033 aaKnown RBP14.49□□□□□ -0.09
SHROOM3-204ENST00000473602 ZXDAP98168 799 aa14.49□□□□□ -0.09
SHROOM3-204ENST00000473602 TTC38Q5R3I4 469 aa14.49□□□□□ -0.09
SHROOM3-204ENST00000473602 OTUD6AQ7L8S5 288 aa14.49□□□□□ -0.09
SHROOM3-204ENST00000473602 SUGP1Q8IWZ8 645 aaKnown RBP14.49□□□□□ -0.09
SHROOM3-204ENST00000473602 LRRC71Q8N4P6 559 aa14.49□□□□□ -0.09
SHROOM3-204ENST00000473602 SPPL3Q8TCT6 385 aa14.49□□□□□ -0.09
SHROOM3-204ENST00000473602 TMEM40Q8WWA1 233 aa14.49□□□□□ -0.09
SHROOM3-204ENST00000473602 P2RX5Q93086 422 aa14.49□□□□□ -0.09
SHROOM3-204ENST00000473602 PPP2R3CQ969Q6 453 aa14.49□□□□□ -0.09
SHROOM3-204ENST00000473602 OSMRQ99650 979 aa14.49□□□□□ -0.09
SHROOM3-204ENST00000473602 CYP26B1Q9NR63 512 aa14.49□□□□□ -0.09
SHROOM3-204ENST00000473602 NOC2LQ9Y3T9 749 aaKnown RBP14.49□□□□□ -0.09
SHROOM3-204ENST00000473602 MRPL42Q9Y6G3 142 aaKnown RBP14.49□□□□□ -0.09
SHROOM3-204ENST00000473602 ZDBF2Q9HCK1 2354 aa14.49□□□□□ -0.09
SHROOM3-204ENST00000473602 CFAP54Q96N23 3096 aa14.48□□□□□ -0.09
SHROOM3-204ENST00000473602 TMEM150BA6NC51 233 aa14.48□□□□□ -0.09
SHROOM3-204ENST00000473602 LOC730098B7Z3J9 87 aa14.48□□□□□ -0.09
SHROOM3-204ENST00000473602 GAS2O43903 313 aaKnown RBP14.48□□□□□ -0.09
SHROOM3-204ENST00000473602 LYPLA2O95372 231 aa14.48□□□□□ -0.09
SHROOM3-204ENST00000473602 ITGB1P05556 798 aa14.48□□□□□ -0.09
SHROOM3-204ENST00000473602 EIF4BP23588 611 aaKnown RBP14.48□□□□□ -0.09
SHROOM3-204ENST00000473602 GJB2P29033 226 aa14.48□□□□□ -0.09
SHROOM3-204ENST00000473602 YWHABP31946 246 aaKnown RBP14.48□□□□□ -0.09
SHROOM3-204ENST00000473602 RFC5P40937 340 aa14.48□□□□□ -0.09
SHROOM3-204ENST00000473602 TXKP42681 527 aa14.48□□□□□ -0.09
SHROOM3-204ENST00000473602 GPC3P51654 580 aa14.48□□□□□ -0.09
SHROOM3-204ENST00000473602 TCF15Q12870 199 aa14.48□□□□□ -0.09
SHROOM3-204ENST00000473602 NFX1Q12986 1120 aaKnown RBP14.48□□□□□ -0.09
SHROOM3-204ENST00000473602 ADGRD2Q7Z7M1 963 aa14.48□□□□□ -0.09
SHROOM3-204ENST00000473602 RBM23Q86U06 439 aaKnown RBP14.48□□□□□ -0.09
SHROOM3-204ENST00000473602 EFHBQ8N7U6 833 aa14.48□□□□□ -0.09
SHROOM3-204ENST00000473602 KLHL23Q8NBE8 558 aa14.48□□□□□ -0.09
SHROOM3-204ENST00000473602 SMRP1Q8NCR6 262 aa14.48□□□□□ -0.09
SHROOM3-204ENST00000473602 LINC01599Q8WXQ3 324 aa14.48□□□□□ -0.09
SHROOM3-204ENST00000473602 SLC7A3Q8WY07 619 aa14.48□□□□□ -0.09
SHROOM3-204ENST00000473602 DYDC2Q96IM9 177 aa14.48□□□□□ -0.09
SHROOM3-204ENST00000473602 HSD17B14Q9BPX1 270 aa14.48□□□□□ -0.09
SHROOM3-204ENST00000473602 EIF2AK1Q9BQI3 630 aaKnown RBP14.48□□□□□ -0.09
SHROOM3-204ENST00000473602 ADAMTS10Q9H324 1103 aa14.48□□□□□ -0.09
SHROOM3-204ENST00000473602 TMX1Q9H3N1 280 aa14.48□□□□□ -0.09
SHROOM3-204ENST00000473602 CDHR5Q9HBB8 845 aa14.48□□□□□ -0.09
SHROOM3-204ENST00000473602 C1orf112Q9NSG2 853 aa14.48□□□□□ -0.09
SHROOM3-204ENST00000473602 RGL1Q9NZL6 768 aa14.48□□□□□ -0.09
SHROOM3-204ENST00000473602 ZFHX2Q9C0A1 2572 aaPredicted RBP14.48□□□□□ -0.09
SHROOM3-204ENST00000473602 SLITRK3O94933 977 aa14.47□□□□□ -0.09
SHROOM3-204ENST00000473602 OR52Z1P0C646 297 aa14.47□□□□□ -0.09
SHROOM3-204ENST00000473602 STAG3L1P0CL83 205 aa14.47□□□□□ -0.09
SHROOM3-204ENST00000473602 ATP2B1P20020 1258 aa14.47□□□□□ -0.09
SHROOM3-204ENST00000473602 NRIP1P48552 1158 aa14.47□□□□□ -0.09
SHROOM3-204ENST00000473602 CYP4A11Q02928 519 aa14.47□□□□□ -0.09
SHROOM3-204ENST00000473602 COASYQ13057 564 aa14.47□□□□□ -0.09
SHROOM3-204ENST00000473602 TMEM266Q2M3C6 531 aa14.47□□□□□ -0.09
SHROOM3-204ENST00000473602 NAALADL2Q58DX5 795 aa14.47□□□□□ -0.09
SHROOM3-204ENST00000473602 PLA2G4FQ68DD2 849 aa14.47□□□□□ -0.09
SHROOM3-204ENST00000473602 RTN4RL1Q86UN2 441 aaPredicted RBP14.47□□□□□ -0.09
SHROOM3-204ENST00000473602 ZNF410Q86VK4 478 aa14.47□□□□□ -0.09
SHROOM3-204ENST00000473602 FAM228AQ86W67 206 aa14.47□□□□□ -0.09
SHROOM3-204ENST00000473602 NPAS4Q8IUM7 802 aa14.47□□□□□ -0.09
SHROOM3-204ENST00000473602 POF1BQ8WVV4 589 aa14.47□□□□□ -0.09
SHROOM3-204ENST00000473602 CEP170P1Q96L14 293 aa14.47□□□□□ -0.09
SHROOM3-204ENST00000473602 SCLT1Q96NL6 688 aa14.47□□□□□ -0.09
SHROOM3-204ENST00000473602 PPP1R16BQ96T49 567 aa14.47□□□□□ -0.09
SHROOM3-204ENST00000473602 PRRX2Q99811 253 aa14.47□□□□□ -0.09
SHROOM3-204ENST00000473602 TMEM60Q9H2L4 133 aa14.47□□□□□ -0.09
SHROOM3-204ENST00000473602 DHX33Q9H6R0 707 aaKnown RBP14.47□□□□□ -0.09
SHROOM3-204ENST00000473602 WRAP73Q9P2S5 460 aaPredicted RBP14.47□□□□□ -0.09
SHROOM3-204ENST00000473602 ST3GAL5Q9UNP4 418 aa14.47□□□□□ -0.09
SHROOM3-204ENST00000473602 SMC3Q9UQE7 1217 aa14.47□□□□□ -0.09
SHROOM3-204ENST00000473602 GTF3C3Q9Y5Q9 886 aa14.47□□□□□ -0.09
SHROOM3-204ENST00000473602 CACNA1HO95180 2353 aa14.46□□□□□ -0.09
SHROOM3-204ENST00000473602 DENND3A2RUS2 1198 aa14.46□□□□□ -0.09
SHROOM3-204ENST00000473602 POTEMA6NI47 508 aa14.46□□□□□ -0.09
SHROOM3-204ENST00000473602 GLP2RO95838 553 aa14.46□□□□□ -0.09
SHROOM3-204ENST00000473602 DARSP14868 501 aaKnown RBP14.46□□□□□ -0.09
SHROOM3-204ENST00000473602 SARSP49591 514 aaKnown RBP14.46□□□□□ -0.09
SHROOM3-204ENST00000473602 POLGP54098 1239 aaPredicted RBP14.46□□□□□ -0.09
SHROOM3-204ENST00000473602 NPEPPSP55786 919 aa14.46□□□□□ -0.09
SHROOM3-204ENST00000473602 CTTNQ14247 550 aaKnown RBP14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms