RNA–Protein interactions for RNA: ENST00000473522.1

RPUSD3-214, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-214ENST00000473522 ZNF396Q96N95 335 aaPredicted RBP19.65■□□□□ 0.74
RPUSD3-214ENST00000473522 SCLT1Q96NL6 688 aa19.65■□□□□ 0.74
RPUSD3-214ENST00000473522 TRAIPQ9BWF2 469 aa19.65■□□□□ 0.74
RPUSD3-214ENST00000473522 CCSER1Q9C0I3 900 aa19.65■□□□□ 0.74
RPUSD3-214ENST00000473522 RNF216Q9NWF9 866 aaPredicted RBP19.65■□□□□ 0.74
RPUSD3-214ENST00000473522 DGKIO75912 1065 aa19.64■□□□□ 0.73
RPUSD3-214ENST00000473522 UPP2O95045 317 aa19.64■□□□□ 0.73
RPUSD3-214ENST00000473522 BRD1O95696 1058 aa19.64■□□□□ 0.73
RPUSD3-214ENST00000473522 ZSCAN20P17040 1043 aaPredicted RBP19.64■□□□□ 0.73
RPUSD3-214ENST00000473522 SFPQP23246 707 aaKnown RBP eCLIP19.64■□□□□ 0.73
RPUSD3-214ENST00000473522 MARCKSP29966 332 aaPredicted RBP19.64■□□□□ 0.73
RPUSD3-214ENST00000473522 CEBPZQ03701 1054 aaKnown RBP19.64■□□□□ 0.73
RPUSD3-214ENST00000473522 TFDP1Q14186 410 aa19.64■□□□□ 0.73
RPUSD3-214ENST00000473522 GRIN2CQ14957 1233 aa19.64■□□□□ 0.73
RPUSD3-214ENST00000473522 TMEM119Q4V9L6 283 aa19.64■□□□□ 0.73
RPUSD3-214ENST00000473522 FAM117BQ6P1L5 589 aa19.64■□□□□ 0.73
RPUSD3-214ENST00000473522 NPAS4Q8IUM7 802 aa19.64■□□□□ 0.73
RPUSD3-214ENST00000473522 SYT2Q8N9I0 419 aaPredicted RBP19.64■□□□□ 0.73
RPUSD3-214ENST00000473522 GUCD1Q96NT3 240 aa19.64■□□□□ 0.73
RPUSD3-214ENST00000473522 CSRNP2Q9H175 543 aa19.64■□□□□ 0.73
RPUSD3-214ENST00000473522 ELAC1Q9H777 363 aaKnown RBP19.64■□□□□ 0.73
RPUSD3-214ENST00000473522 MINDY3Q9H8M7 445 aa19.64■□□□□ 0.73
RPUSD3-214ENST00000473522 RC3H2Q9HBD1 1191 aaKnown RBP19.64■□□□□ 0.73
RPUSD3-214ENST00000473522 GPRC5CQ9NQ84 441 aa19.64■□□□□ 0.73
RPUSD3-214ENST00000473522 CHD9Q3L8U1 2897 aa19.63■□□□□ 0.73
RPUSD3-214ENST00000473522 KAT6AQ92794 2004 aa19.63■□□□□ 0.73
RPUSD3-214ENST00000473522 DENND3A2RUS2 1198 aa19.63■□□□□ 0.73
RPUSD3-214ENST00000473522 LCHNA4D1U4 455 aa19.63■□□□□ 0.73
RPUSD3-214ENST00000473522 ARHGEF15O94989 841 aa19.63■□□□□ 0.73
RPUSD3-214ENST00000473522 SLC34A2O95436 690 aa19.63■□□□□ 0.73
RPUSD3-214ENST00000473522 STAG3L1P0CL83 205 aa19.63■□□□□ 0.73
RPUSD3-214ENST00000473522 FGFR4P22455 802 aa19.63■□□□□ 0.73
RPUSD3-214ENST00000473522 CAPSQ13938 189 aa19.63■□□□□ 0.73
RPUSD3-214ENST00000473522 PPP2R2DQ66LE6 453 aa19.63■□□□□ 0.73
RPUSD3-214ENST00000473522 C1orf186Q6ZWK4 172 aa19.63■□□□□ 0.73
RPUSD3-214ENST00000473522 FAM161BQ96MY7 647 aa19.63■□□□□ 0.73
RPUSD3-214ENST00000473522 CDX2Q99626 313 aaPredicted RBP19.63■□□□□ 0.73
RPUSD3-214ENST00000473522 POLR3FQ9H1D9 316 aaPredicted RBP19.63■□□□□ 0.73
RPUSD3-214ENST00000473522 TFIP11Q9UBB9 837 aaKnown RBP19.63■□□□□ 0.73
RPUSD3-214ENST00000473522 ZDHHC9Q9Y397 364 aa19.63■□□□□ 0.73
RPUSD3-214ENST00000473522 A0A0U1RQF3 1178 aa19.62■□□□□ 0.73
RPUSD3-214ENST00000473522 LINC01553A4QN01 128 aa19.62■□□□□ 0.73
RPUSD3-214ENST00000473522 PPP6R2O75170 966 aa19.62■□□□□ 0.73
RPUSD3-214ENST00000473522 YEATS4O95619 227 aa19.62■□□□□ 0.73
RPUSD3-214ENST00000473522 HOXA11P31270 313 aaPredicted RBP19.62■□□□□ 0.73
RPUSD3-214ENST00000473522 PHKA2P46019 1235 aa19.62■□□□□ 0.73
RPUSD3-214ENST00000473522 FAM102BQ5T8I3 360 aa19.62■□□□□ 0.73
RPUSD3-214ENST00000473522 RINT1Q6NUQ1 792 aa19.62■□□□□ 0.73
RPUSD3-214ENST00000473522 MAEAQ7L5Y9 396 aa19.62■□□□□ 0.73
RPUSD3-214ENST00000473522 KIFAP3Q92845 792 aa19.62■□□□□ 0.73
RPUSD3-214ENST00000473522 CALML4Q96GE6 196 aa19.62■□□□□ 0.73
RPUSD3-214ENST00000473522 EPSTI1Q96J88 318 aa19.62■□□□□ 0.73
RPUSD3-214ENST00000473522 DACT1Q9NYF0 836 aa19.62■□□□□ 0.73
RPUSD3-214ENST00000473522 MYH9P35579 1960 aaKnown RBP19.61■□□□□ 0.73
RPUSD3-214ENST00000473522 GUCY2CP25092 1073 aa19.61■□□□□ 0.73
RPUSD3-214ENST00000473522 SLC12A3P55017 1021 aa19.61■□□□□ 0.73
RPUSD3-214ENST00000473522 ERVK-21P61565 698 aa19.61■□□□□ 0.73
RPUSD3-214ENST00000473522 ZRSR1Q15695 479 aaKnown RBP19.61■□□□□ 0.73
RPUSD3-214ENST00000473522 FOXD4L5Q5VV16 416 aaPredicted RBP19.61■□□□□ 0.73
RPUSD3-214ENST00000473522 USP49Q70CQ1 688 aa19.61■□□□□ 0.73
RPUSD3-214ENST00000473522 CATSPER4Q7RTX7 472 aa19.61■□□□□ 0.73
RPUSD3-214ENST00000473522 KRI1Q8N9T8 703 aaKnown RBP19.61■□□□□ 0.73
RPUSD3-214ENST00000473522 FOXD4L4Q8WXT5 416 aaPredicted RBP19.61■□□□□ 0.73
RPUSD3-214ENST00000473522 CDK5RAP3Q96JB5 506 aa19.61■□□□□ 0.73
RPUSD3-214ENST00000473522 CLIC6Q96NY7 704 aa19.61■□□□□ 0.73
RPUSD3-214ENST00000473522 YME1L1Q96TA2 773 aa19.61■□□□□ 0.73
RPUSD3-214ENST00000473522 TIPINQ9BVW5 301 aa19.61■□□□□ 0.73
RPUSD3-214ENST00000473522 TMEM161AQ9NX61 479 aa19.61■□□□□ 0.73
RPUSD3-214ENST00000473522 KCND2Q9NZV8 630 aa19.61■□□□□ 0.73
RPUSD3-214ENST00000473522 PCDHB7Q9Y5E2 793 aa19.61■□□□□ 0.73
RPUSD3-214ENST00000473522 SPTLC2O15270 562 aa19.6■□□□□ 0.73
RPUSD3-214ENST00000473522 ZNF623O75123 536 aa19.6■□□□□ 0.73
RPUSD3-214ENST00000473522 EOMESO95936 686 aa19.6■□□□□ 0.73
RPUSD3-214ENST00000473522 PLA2G4BP0C869 781 aa19.6■□□□□ 0.73
RPUSD3-214ENST00000473522 DDIT3P35638 169 aa19.6■□□□□ 0.73
RPUSD3-214ENST00000473522 MBTD1Q05BQ5 628 aa19.6■□□□□ 0.73
RPUSD3-214ENST00000473522 STK38Q15208 465 aa19.6■□□□□ 0.73
RPUSD3-214ENST00000473522 AMHR2Q16671 573 aa19.6■□□□□ 0.73
RPUSD3-214ENST00000473522 CDCA2Q69YH5 1023 aaPredicted RBP19.6■□□□□ 0.73
RPUSD3-214ENST00000473522 LRRC15Q8TF66 581 aa19.6■□□□□ 0.73
RPUSD3-214ENST00000473522 PLIN2Q99541 437 aa19.6■□□□□ 0.73
RPUSD3-214ENST00000473522 FZD8Q9H461 694 aa19.6■□□□□ 0.73
RPUSD3-214ENST00000473522 BLOC1S4Q9NUP1 217 aa19.6■□□□□ 0.73
RPUSD3-214ENST00000473522 AGPAT5Q9NUQ2 364 aa19.6■□□□□ 0.73
RPUSD3-214ENST00000473522 AXLP30530 894 aa19.59■□□□□ 0.73
RPUSD3-214ENST00000473522 NAMPTP43490 491 aa19.59■□□□□ 0.73
RPUSD3-214ENST00000473522 KARSQ15046 597 aaKnown RBP19.59■□□□□ 0.73
RPUSD3-214ENST00000473522 ARSHQ5FYA8 562 aa19.59■□□□□ 0.73
RPUSD3-214ENST00000473522 SPECC1Q5M775 1068 aa19.59■□□□□ 0.73
RPUSD3-214ENST00000473522 ZNF598Q86UK7 904 aaKnown RBP19.59■□□□□ 0.73
RPUSD3-214ENST00000473522 ECHDC2Q86YB7 292 aa19.59■□□□□ 0.73
RPUSD3-214ENST00000473522 DAW1Q8N136 415 aa19.59■□□□□ 0.73
RPUSD3-214ENST00000473522 BSNDQ8WZ55 320 aa19.59■□□□□ 0.73
RPUSD3-214ENST00000473522 TGS1Q96RS0 853 aaKnown RBP19.59■□□□□ 0.73
RPUSD3-214ENST00000473522 NTPCRQ9BSD7 190 aaKnown RBP19.59■□□□□ 0.73
RPUSD3-214ENST00000473522 RUSC1Q9BVN2 902 aa19.59■□□□□ 0.73
RPUSD3-214ENST00000473522 C17orf75Q9HAS0 396 aa19.59■□□□□ 0.73
RPUSD3-214ENST00000473522 POLD4Q9HCU8 107 aa19.59■□□□□ 0.73
RPUSD3-214ENST00000473522 RCOR1Q9UKL0 485 aa19.59■□□□□ 0.73
RPUSD3-214ENST00000473522 CFAP45Q9UL16 551 aa19.59■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms