RNA–Protein interactions for RNA: ENST00000473345.5

MCF2L-223, Transcript of MCF.2 cell line derived transforming sequence like, human

TSL 3

Gene MCF2L, Length 399 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MCF2L-223	ENST00000473345	TBC1D13	Q9NVG8	400 aa		10.89	□□□□□ -0.67
MCF2L-223	ENST00000473345	PUF60	Q9UHX1	559 aa	Known RBP	10.89	□□□□□ -0.67
MCF2L-223	ENST00000473345	PCDHA10	Q9Y5I2	948 aa		10.89	□□□□□ -0.67
MCF2L-223	ENST00000473345	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	10.88	□□□□□ -0.67
MCF2L-223	ENST00000473345		F8W810	466 aa		10.88	□□□□□ -0.67
MCF2L-223	ENST00000473345	ZC3H11A	O75152	810 aa	Known RBP eCLIP	10.88	□□□□□ -0.67
MCF2L-223	ENST00000473345	OFD1	O75665	1012 aa		10.88	□□□□□ -0.67
MCF2L-223	ENST00000473345	OAT	P04181	439 aa		10.88	□□□□□ -0.67
MCF2L-223	ENST00000473345	MYB	P10242	640 aa		10.88	□□□□□ -0.67
MCF2L-223	ENST00000473345	CTSA	P10619	480 aa		10.88	□□□□□ -0.67
MCF2L-223	ENST00000473345	PPM1A	P35813	382 aa		10.88	□□□□□ -0.67
MCF2L-223	ENST00000473345	PHKA2	P46019	1235 aa		10.88	□□□□□ -0.67
MCF2L-223	ENST00000473345	PTPN14	Q15678	1187 aa		10.88	□□□□□ -0.67
MCF2L-223	ENST00000473345	NTRK3	Q16288	839 aa		10.88	□□□□□ -0.67
MCF2L-223	ENST00000473345	TPRN	Q4KMQ1	711 aa		10.88	□□□□□ -0.67
MCF2L-223	ENST00000473345	ERICH6B	Q5W0A0	696 aa		10.88	□□□□□ -0.67
MCF2L-223	ENST00000473345	B3GNT9	Q6UX72	402 aa		10.88	□□□□□ -0.67
MCF2L-223	ENST00000473345	TAS1R1	Q7RTX1	841 aa		10.88	□□□□□ -0.67
MCF2L-223	ENST00000473345	ZNF579	Q8NAF0	562 aa	Known RBP	10.88	□□□□□ -0.67
MCF2L-223	ENST00000473345	TNPO1	Q92973	898 aa	Known RBP	10.88	□□□□□ -0.67
MCF2L-223	ENST00000473345	PHKB	Q93100	1093 aa		10.88	□□□□□ -0.67
MCF2L-223	ENST00000473345	IGSF21	Q96ID5	467 aa		10.88	□□□□□ -0.67
MCF2L-223	ENST00000473345	ANO2	Q9NQ90	1003 aa		10.88	□□□□□ -0.67
MCF2L-223	ENST00000473345	RBM28	Q9NW13	759 aa	Known RBP	10.88	□□□□□ -0.67
MCF2L-223	ENST00000473345	NR2E1	Q9Y466	385 aa		10.88	□□□□□ -0.67
MCF2L-223	ENST00000473345		A0A087WZ62	844 aa		10.87	□□□□□ -0.67
MCF2L-223	ENST00000473345	IGKV6-21	A0A0C4DH24	114 aa		10.87	□□□□□ -0.67
MCF2L-223	ENST00000473345	ESYT2	A0FGR8	921 aa		10.87	□□□□□ -0.67
MCF2L-223	ENST00000473345	FSD2	A1L4K1	749 aa		10.87	□□□□□ -0.67
MCF2L-223	ENST00000473345	KRBA1	A5PL33	1030 aa		10.87	□□□□□ -0.67
MCF2L-223	ENST00000473345	MAGEB2	O15479	319 aa		10.87	□□□□□ -0.67
MCF2L-223	ENST00000473345	CHMP2A	O43633	222 aa		10.87	□□□□□ -0.67
MCF2L-223	ENST00000473345	PSAP	P07602	524 aa		10.87	□□□□□ -0.67
MCF2L-223	ENST00000473345	CA8	P35219	290 aa		10.87	□□□□□ -0.67
MCF2L-223	ENST00000473345	MTHFR	P42898	656 aa		10.87	□□□□□ -0.67
MCF2L-223	ENST00000473345	KRT17	Q04695	432 aa		10.87	□□□□□ -0.67
MCF2L-223	ENST00000473345	CES5A	Q6NT32	575 aa		10.87	□□□□□ -0.67
MCF2L-223	ENST00000473345	AGMO	Q6ZNB7	445 aa		10.87	□□□□□ -0.67
MCF2L-223	ENST00000473345	DHX32	Q7L7V1	743 aa	Known RBP	10.87	□□□□□ -0.67
MCF2L-223	ENST00000473345	GPR149	Q86SP6	731 aa		10.87	□□□□□ -0.67
MCF2L-223	ENST00000473345	DDX53	Q86TM3	631 aa	Known RBP	10.87	□□□□□ -0.67
MCF2L-223	ENST00000473345	ADSSL1	Q8N142	457 aa		10.87	□□□□□ -0.67
MCF2L-223	ENST00000473345	TDRD5	Q8NAT2	981 aa	Known RBP	10.87	□□□□□ -0.67
MCF2L-223	ENST00000473345	FLCN	Q8NFG4	579 aa		10.87	□□□□□ -0.67
MCF2L-223	ENST00000473345	SLC5A5	Q92911	643 aa		10.87	□□□□□ -0.67
MCF2L-223	ENST00000473345	NECTIN4	Q96NY8	510 aa		10.87	□□□□□ -0.67
MCF2L-223	ENST00000473345	KLHL5	Q96PQ7	755 aa		10.87	□□□□□ -0.67
MCF2L-223	ENST00000473345	FDXACB1	Q9BRP7	624 aa	Predicted RBP	10.87	□□□□□ -0.67
MCF2L-223	ENST00000473345	MINDY3	Q9H8M7	445 aa		10.87	□□□□□ -0.67
MCF2L-223	ENST00000473345	DISC1	Q9NRI5	854 aa		10.87	□□□□□ -0.67
MCF2L-223	ENST00000473345	TBC1D22B	Q9NU19	505 aa		10.87	□□□□□ -0.67
MCF2L-223	ENST00000473345	WRAP73	Q9P2S5	460 aa	Predicted RBP	10.87	□□□□□ -0.67
MCF2L-223	ENST00000473345	INPP5F	Q9Y2H2	1132 aa		10.87	□□□□□ -0.67
MCF2L-223	ENST00000473345	IRAK3	Q9Y616	596 aa		10.87	□□□□□ -0.67
MCF2L-223	ENST00000473345	WDR81	Q562E7	1941 aa		10.87	□□□□□ -0.67
MCF2L-223	ENST00000473345	C2orf16	Q68DN1	1984 aa		10.86	□□□□□ -0.67
MCF2L-223	ENST00000473345	HOXA2	O43364	376 aa		10.86	□□□□□ -0.67
MCF2L-223	ENST00000473345	DTNB	O60941	627 aa		10.86	□□□□□ -0.67
MCF2L-223	ENST00000473345	PSMD10	O75832	226 aa		10.86	□□□□□ -0.67
MCF2L-223	ENST00000473345	EFEMP2	O95967	443 aa		10.86	□□□□□ -0.67
MCF2L-223	ENST00000473345	SSB	P05455	408 aa	Known RBP eCLIP	10.86	□□□□□ -0.67
MCF2L-223	ENST00000473345	CNP	P09543	421 aa	Known RBP	10.86	□□□□□ -0.67
MCF2L-223	ENST00000473345	SRGAP2B	P0DMP2	458 aa		10.86	□□□□□ -0.67
MCF2L-223	ENST00000473345	ZSCAN20	P17040	1043 aa	Predicted RBP	10.86	□□□□□ -0.67
MCF2L-223	ENST00000473345	AOC1	P19801	751 aa		10.86	□□□□□ -0.67
MCF2L-223	ENST00000473345	CLCN4	P51793	760 aa		10.86	□□□□□ -0.67
MCF2L-223	ENST00000473345	CLCN5	P51795	746 aa		10.86	□□□□□ -0.67
MCF2L-223	ENST00000473345	NUBP1	P53384	320 aa		10.86	□□□□□ -0.67
MCF2L-223	ENST00000473345	NPY5R	Q15761	445 aa		10.86	□□□□□ -0.67
MCF2L-223	ENST00000473345	ODR4	Q5SWX8	454 aa		10.86	□□□□□ -0.67
MCF2L-223	ENST00000473345	UBXN11	Q5T124	520 aa		10.86	□□□□□ -0.67
MCF2L-223	ENST00000473345	SMAP1	Q8IYB5	467 aa	Predicted RBP	10.86	□□□□□ -0.67
MCF2L-223	ENST00000473345	ABI1	Q8IZP0	508 aa		10.86	□□□□□ -0.67
MCF2L-223	ENST00000473345	MAP7D2	Q96T17	732 aa		10.86	□□□□□ -0.67
MCF2L-223	ENST00000473345	TRAIP	Q9BWF2	469 aa		10.86	□□□□□ -0.67
MCF2L-223	ENST00000473345	KCNK12	Q9HB15	430 aa		10.86	□□□□□ -0.67
MCF2L-223	ENST00000473345	IFT122	Q9HBG6	1241 aa		10.86	□□□□□ -0.67
MCF2L-223	ENST00000473345	MARCH5	Q9NX47	278 aa		10.86	□□□□□ -0.67
MCF2L-223	ENST00000473345	DBR1	Q9UK59	544 aa	Known RBP	10.86	□□□□□ -0.67
MCF2L-223	ENST00000473345	MED19	A0JLT2	244 aa	Predicted RBP	10.85	□□□□□ -0.67
MCF2L-223	ENST00000473345	WDR64	B1ANS9	1081 aa		10.85	□□□□□ -0.67
MCF2L-223	ENST00000473345	hCG_1984214	I3L0E3	225 aa		10.85	□□□□□ -0.67
MCF2L-223	ENST00000473345	EML1	O00423	815 aa		10.85	□□□□□ -0.67
MCF2L-223	ENST00000473345	TDP2	O95551	362 aa		10.85	□□□□□ -0.67
MCF2L-223	ENST00000473345	ALDH7A1	P49419	539 aa	Known RBP	10.85	□□□□□ -0.67
MCF2L-223	ENST00000473345	ANGPT1	Q15389	498 aa		10.85	□□□□□ -0.67
MCF2L-223	ENST00000473345	TSGA10IP	Q3SY00	556 aa		10.85	□□□□□ -0.67
MCF2L-223	ENST00000473345	MTERF2	Q49AM1	385 aa		10.85	□□□□□ -0.67
MCF2L-223	ENST00000473345	NOMO2	Q5JPE7	1267 aa		10.85	□□□□□ -0.67
MCF2L-223	ENST00000473345	ATAT1	Q5SQI0	421 aa		10.85	□□□□□ -0.67
MCF2L-223	ENST00000473345	PLA2G4F	Q68DD2	849 aa		10.85	□□□□□ -0.67
MCF2L-223	ENST00000473345	ANO5	Q75V66	913 aa		10.85	□□□□□ -0.67
MCF2L-223	ENST00000473345	CCDC105	Q8IYK2	499 aa		10.85	□□□□□ -0.67
MCF2L-223	ENST00000473345	SIX5	Q8N196	739 aa		10.85	□□□□□ -0.67
MCF2L-223	ENST00000473345	REXO1	Q8N1G1	1221 aa	Known RBP	10.85	□□□□□ -0.67
MCF2L-223	ENST00000473345	ZNF713	Q8N859	430 aa	Predicted RBP	10.85	□□□□□ -0.67
MCF2L-223	ENST00000473345	NLRP7	Q8WX94	980 aa		10.85	□□□□□ -0.67
MCF2L-223	ENST00000473345	TMEM169	Q96HH4	297 aa		10.85	□□□□□ -0.67
MCF2L-223	ENST00000473345	MYADM	Q96S97	322 aa		10.85	□□□□□ -0.67
MCF2L-223	ENST00000473345	NIFK	Q9BYG3	293 aa	Known RBP	10.85	□□□□□ -0.67

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