RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 ASCC2Q9H1I8 757 aaPredicted RBP4.24□□□□□ -1.73
XRN1-209ENST00000472625 ACBD3Q9H3P7 528 aa4.24□□□□□ -1.73
XRN1-209ENST00000472625 SH2D4AQ9H788 454 aa4.24□□□□□ -1.73
XRN1-209ENST00000472625 GPR108Q9NPR9 543 aa4.24□□□□□ -1.73
XRN1-209ENST00000472625 OGDHLQ9ULD0 1010 aa4.24□□□□□ -1.73
XRN1-209ENST00000472625 PPT2Q9UMR5 302 aa4.24□□□□□ -1.73
XRN1-209ENST00000472625 STXBP5LQ9Y2K9 1186 aa4.24□□□□□ -1.73
XRN1-209ENST00000472625 CEP290O15078 2479 aa4.24□□□□□ -1.73
XRN1-209ENST00000472625 DOCK1Q14185 1865 aa4.24□□□□□ -1.73
XRN1-209ENST00000472625 FLT1P17948 1338 aa4.23□□□□□ -1.73
XRN1-209ENST00000472625 MYH13Q9UKX3 1938 aa4.23□□□□□ -1.73
XRN1-209ENST00000472625 CDH23Q9H251 3354 aa4.23□□□□□ -1.73
XRN1-209ENST00000472625 LOC285556D6RIA3 1793 aa4.23□□□□□ -1.73
XRN1-209ENST00000472625 MAST2Q6P0Q8 1798 aa4.23□□□□□ -1.73
XRN1-209ENST00000472625 C9IYK1 514 aa4.23□□□□□ -1.73
XRN1-209ENST00000472625 DNM1LO00429 736 aa4.23□□□□□ -1.73
XRN1-209ENST00000472625 COPB2P35606 906 aa4.23□□□□□ -1.73
XRN1-209ENST00000472625 HK2P52789 917 aa4.23□□□□□ -1.73
XRN1-209ENST00000472625 RHBDL3P58872 404 aa4.23□□□□□ -1.73
XRN1-209ENST00000472625 PKN1Q16512 942 aa4.23□□□□□ -1.73
XRN1-209ENST00000472625 TREML2Q5T2D2 321 aa4.23□□□□□ -1.73
XRN1-209ENST00000472625 LCE4AQ5TA78 99 aa4.23□□□□□ -1.73
XRN1-209ENST00000472625 MPZL3Q6UWV2 235 aa4.23□□□□□ -1.73
XRN1-209ENST00000472625 LBX2Q6XYB7 198 aa4.23□□□□□ -1.73
XRN1-209ENST00000472625 RUFY4Q6ZNE9 571 aa4.23□□□□□ -1.73
XRN1-209ENST00000472625 TMC3Q7Z5M5 1100 aa4.23□□□□□ -1.73
XRN1-209ENST00000472625 TTC6Q86TZ1 520 aa4.23□□□□□ -1.73
XRN1-209ENST00000472625 LSRQ86X29 649 aaPredicted RBP4.23□□□□□ -1.73
XRN1-209ENST00000472625 ERC1Q8IUD2 1116 aa4.23□□□□□ -1.73
XRN1-209ENST00000472625 FTSJ3Q8IY81 847 aaKnown RBP4.23□□□□□ -1.73
XRN1-209ENST00000472625 TAB3Q8N5C8 712 aaPredicted RBP4.23□□□□□ -1.73
XRN1-209ENST00000472625 MB21D1Q8N884 522 aa4.23□□□□□ -1.73
XRN1-209ENST00000472625 C12orf42Q96LP6 360 aa4.23□□□□□ -1.73
XRN1-209ENST00000472625 DIRC2Q96SL1 478 aa4.23□□□□□ -1.73
XRN1-209ENST00000472625 GDF15Q99988 308 aa4.23□□□□□ -1.73
XRN1-209ENST00000472625 ASPNQ9BXN1 380 aa4.23□□□□□ -1.73
XRN1-209ENST00000472625 HDAC8Q9BY41 377 aa4.23□□□□□ -1.73
XRN1-209ENST00000472625 CABP5Q9NP86 173 aa4.23□□□□□ -1.73
XRN1-209ENST00000472625 DDX4Q9NQI0 724 aaKnown RBP4.23□□□□□ -1.73
XRN1-209ENST00000472625 LMCD1Q9NZU5 365 aa4.23□□□□□ -1.73
XRN1-209ENST00000472625 HMG20BQ9P0W2 317 aa4.23□□□□□ -1.73
XRN1-209ENST00000472625 NRBP1Q9UHY1 535 aa4.23□□□□□ -1.73
XRN1-209ENST00000472625 SERPINB13Q9UIV8 391 aa4.23□□□□□ -1.73
XRN1-209ENST00000472625 ZBTB21Q9ULJ3 1066 aa4.23□□□□□ -1.73
XRN1-209ENST00000472625 NOB1Q9ULX3 412 aaKnown RBP4.23□□□□□ -1.73
XRN1-209ENST00000472625 GABRQQ9UN88 632 aa4.23□□□□□ -1.73
XRN1-209ENST00000472625 RABGAP1Q9Y3P9 1069 aa4.23□□□□□ -1.73
XRN1-209ENST00000472625 LAMA2P24043 3122 aaKnown RBP4.23□□□□□ -1.73
XRN1-209ENST00000472625 MUC3AQ02505 3323 aa4.23□□□□□ -1.73
XRN1-209ENST00000472625 SLC15A5A6NIM6 579 aa4.22□□□□□ -1.73
XRN1-209ENST00000472625 DBX1A6NMT0 343 aa4.22□□□□□ -1.73
XRN1-209ENST00000472625 NOTOA8MTQ0 251 aa4.22□□□□□ -1.73
XRN1-209ENST00000472625 KBTBD13C9JR72 458 aa4.22□□□□□ -1.73
XRN1-209ENST00000472625 STRNO43815 780 aa4.22□□□□□ -1.73
XRN1-209ENST00000472625 GLI1P08151 1106 aa4.22□□□□□ -1.73
XRN1-209ENST00000472625 HOXC6P09630 235 aa4.22□□□□□ -1.73
XRN1-209ENST00000472625 CYP2B6P20813 491 aa4.22□□□□□ -1.73
XRN1-209ENST00000472625 ADORA1P30542 326 aa4.22□□□□□ -1.73
XRN1-209ENST00000472625 TRHRP34981 398 aaPredicted RBP4.22□□□□□ -1.73
XRN1-209ENST00000472625 MAGEA10P43363 369 aaPredicted RBP4.22□□□□□ -1.73
XRN1-209ENST00000472625 AFMP43652 599 aa4.22□□□□□ -1.73
XRN1-209ENST00000472625 ZNF165P49910 485 aa4.22□□□□□ -1.73
XRN1-209ENST00000472625 TIMM10P62072 90 aa4.22□□□□□ -1.73
XRN1-209ENST00000472625 TFCP2Q12800 502 aa4.22□□□□□ -1.73
XRN1-209ENST00000472625 MAP3K12Q12852 859 aa4.22□□□□□ -1.73
XRN1-209ENST00000472625 TTF1Q15361 905 aaPredicted RBP4.22□□□□□ -1.73
XRN1-209ENST00000472625 HSP90AB4PQ58FF6 505 aa4.22□□□□□ -1.73
XRN1-209ENST00000472625 TMEM67Q5HYA8 995 aa4.22□□□□□ -1.73
XRN1-209ENST00000472625 FAM109BQ6ICB4 259 aaPredicted RBP4.22□□□□□ -1.73
XRN1-209ENST00000472625 CCDC174Q6PII3 467 aa4.22□□□□□ -1.73
XRN1-209ENST00000472625 GPR142Q7Z601 462 aa4.22□□□□□ -1.73
XRN1-209ENST00000472625 PLEKHH3Q7Z736 793 aa4.22□□□□□ -1.73
XRN1-209ENST00000472625 TSPYL5Q86VY4 417 aaPredicted RBP4.22□□□□□ -1.73
XRN1-209ENST00000472625 CREG2Q8IUH2 290 aa4.22□□□□□ -1.73
XRN1-209ENST00000472625 ZFPM1Q8IX07 1006 aa4.22□□□□□ -1.73
XRN1-209ENST00000472625 ZNF654Q8IZM8 581 aa4.22□□□□□ -1.73
XRN1-209ENST00000472625 ABRAQ8N0Z2 381 aa4.22□□□□□ -1.73
XRN1-209ENST00000472625 DEFB123Q8N688 67 aa4.22□□□□□ -1.73
XRN1-209ENST00000472625 ARRDC4Q8NCT1 418 aa4.22□□□□□ -1.73
XRN1-209ENST00000472625 TRIB2Q92519 343 aa4.22□□□□□ -1.73
XRN1-209ENST00000472625 LPAR1Q92633 364 aa4.22□□□□□ -1.73
XRN1-209ENST00000472625 SHDQ96IW2 340 aa4.22□□□□□ -1.73
XRN1-209ENST00000472625 ALPK1Q96QP1 1244 aa4.22□□□□□ -1.73
XRN1-209ENST00000472625 SLC38A3Q99624 504 aa4.22□□□□□ -1.73
XRN1-209ENST00000472625 MEIS3Q99687 375 aa4.22□□□□□ -1.73
XRN1-209ENST00000472625 G6PC3Q9BUM1 346 aa4.22□□□□□ -1.73
XRN1-209ENST00000472625 CHMP4BQ9H444 224 aaKnown RBP4.22□□□□□ -1.73
XRN1-209ENST00000472625 AATFQ9NY61 560 aaKnown RBP eCLIP4.22□□□□□ -1.73
XRN1-209ENST00000472625 STAP2Q9UGK3 403 aa4.22□□□□□ -1.73
XRN1-209ENST00000472625 GJD2Q9UKL4 321 aa4.22□□□□□ -1.73
XRN1-209ENST00000472625 PA2G4Q9UQ80 394 aaKnown RBP4.22□□□□□ -1.73
XRN1-209ENST00000472625 EPB41L3Q9Y2J2 1087 aaPredicted RBP4.22□□□□□ -1.73
XRN1-209ENST00000472625 ROBO3Q96MS0 1386 aa4.22□□□□□ -1.73
XRN1-209ENST00000472625 SPTBN5Q9NRC6 3674 aaKnown RBP4.22□□□□□ -1.73
XRN1-209ENST00000472625 CCER2I3L3R5 266 aa4.21□□□□□ -1.74
XRN1-209ENST00000472625 COL6A1P12109 1028 aa4.21□□□□□ -1.74
XRN1-209ENST00000472625 CYP7A1P22680 504 aa4.21□□□□□ -1.74
XRN1-209ENST00000472625 TPP2P29144 1249 aaPredicted RBP4.21□□□□□ -1.74
XRN1-209ENST00000472625 MCAMP43121 646 aa4.21□□□□□ -1.74
XRN1-209ENST00000472625 CTSKP43235 329 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms