RNA–Protein interactions for RNA: ENST00000471978.5

C9orf3-213, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-213ENST00000471978 P4HBP07237 508 aaKnown RBP25.27■■□□□ 1.64
C9orf3-213ENST00000471978 FDPSP14324 419 aaKnown RBP25.27■■□□□ 1.64
C9orf3-213ENST00000471978 ZNF410Q86VK4 478 aa25.27■■□□□ 1.64
C9orf3-213ENST00000471978 LRRC43Q8N309 656 aa25.27■■□□□ 1.64
C9orf3-213ENST00000471978 GTF3C6Q969F1 213 aa25.27■■□□□ 1.64
C9orf3-213ENST00000471978 CYP26B1Q9NR63 512 aa25.27■■□□□ 1.64
C9orf3-213ENST00000471978 FAM86C2PA6NEL3 165 aa25.26■■□□□ 1.63
C9orf3-213ENST00000471978 LARGE1O95461 756 aa25.26■■□□□ 1.63
C9orf3-213ENST00000471978 EOMESO95936 686 aa25.26■■□□□ 1.63
C9orf3-213ENST00000471978 SFPQP23246 707 aaKnown RBP eCLIP25.26■■□□□ 1.63
C9orf3-213ENST00000471978 KRT2P35908 639 aa25.26■■□□□ 1.63
C9orf3-213ENST00000471978 NPEPPSP55786 919 aa25.26■■□□□ 1.63
C9orf3-213ENST00000471978 ERVFC1P60507 584 aa25.26■■□□□ 1.63
C9orf3-213ENST00000471978 NR5A1Q13285 461 aa25.26■■□□□ 1.63
C9orf3-213ENST00000471978 CLLU1OSQ5K130 101 aa25.26■■□□□ 1.63
C9orf3-213ENST00000471978 POTEDQ86YR6 584 aa25.26■■□□□ 1.63
C9orf3-213ENST00000471978 MSLNLQ96KJ4 702 aa25.26■■□□□ 1.63
C9orf3-213ENST00000471978 INO80BQ9C086 356 aaPredicted RBP25.26■■□□□ 1.63
C9orf3-213ENST00000471978 BRMS1Q9HCU9 246 aa25.26■■□□□ 1.63
C9orf3-213ENST00000471978 C11orf16Q9NQ32 467 aa25.26■■□□□ 1.63
C9orf3-213ENST00000471978 CHST12Q9NRB3 414 aa25.26■■□□□ 1.63
C9orf3-213ENST00000471978 CLEC1BQ9P126 229 aa25.26■■□□□ 1.63
C9orf3-213ENST00000471978 FAM205CA6NFA0 338 aa25.25■■□□□ 1.63
C9orf3-213ENST00000471978 C19orf67A6NJJ6 358 aa25.25■■□□□ 1.63
C9orf3-213ENST00000471978 PER2O15055 1255 aa25.25■■□□□ 1.63
C9orf3-213ENST00000471978 PLCB3Q01970 1234 aa25.25■■□□□ 1.63
C9orf3-213ENST00000471978 KCNT2Q6UVM3 1135 aa25.25■■□□□ 1.63
C9orf3-213ENST00000471978 ZNF598Q86UK7 904 aaKnown RBP25.25■■□□□ 1.63
C9orf3-213ENST00000471978 KSR1Q8IVT5 923 aa25.25■■□□□ 1.63
C9orf3-213ENST00000471978 SLC7A3Q8WY07 619 aa25.25■■□□□ 1.63
C9orf3-213ENST00000471978 MRPS27Q92552 414 aaKnown RBP25.25■■□□□ 1.63
C9orf3-213ENST00000471978 CEP170P1Q96L14 293 aa25.25■■□□□ 1.63
C9orf3-213ENST00000471978 NLRP4Q96MN2 994 aa25.25■■□□□ 1.63
C9orf3-213ENST00000471978 ZNF558Q96NG5 402 aa25.25■■□□□ 1.63
C9orf3-213ENST00000471978 WRAP73Q9P2S5 460 aaPredicted RBP25.25■■□□□ 1.63
C9orf3-213ENST00000471978 PUF60Q9UHX1 559 aaKnown RBP25.25■■□□□ 1.63
C9orf3-213ENST00000471978 LZTS1Q9Y250 596 aa25.25■■□□□ 1.63
C9orf3-213ENST00000471978 EIF5BO60841 1220 aaKnown RBP25.24■■□□□ 1.63
C9orf3-213ENST00000471978 BAG4O95429 457 aaKnown RBP25.24■■□□□ 1.63
C9orf3-213ENST00000471978 ALADP13716 330 aa25.24■■□□□ 1.63
C9orf3-213ENST00000471978 PBX3P40426 434 aa25.24■■□□□ 1.63
C9orf3-213ENST00000471978 NEK4P51957 841 aa25.24■■□□□ 1.63
C9orf3-213ENST00000471978 EPHA7Q15375 998 aa25.24■■□□□ 1.63
C9orf3-213ENST00000471978 NCAPH2Q6IBW4 605 aa25.24■■□□□ 1.63
C9orf3-213ENST00000471978 PDE12Q6L8Q7 609 aaKnown RBP25.24■■□□□ 1.63
C9orf3-213ENST00000471978 ZNF579Q8NAF0 562 aaKnown RBP25.24■■□□□ 1.63
C9orf3-213ENST00000471978 HELQQ8TDG4 1101 aa25.24■■□□□ 1.63
C9orf3-213ENST00000471978 LXNQ9BS40 222 aa25.24■■□□□ 1.63
C9orf3-213ENST00000471978 FSCN2O14926 492 aa25.23■■□□□ 1.63
C9orf3-213ENST00000471978 EYA4O95677 639 aa25.23■■□□□ 1.63
C9orf3-213ENST00000471978 GLP2RO95838 553 aa25.23■■□□□ 1.63
C9orf3-213ENST00000471978 ATF7P17544 494 aaPredicted RBP25.23■■□□□ 1.63
C9orf3-213ENST00000471978 PPM1AP35813 382 aa25.23■■□□□ 1.63
C9orf3-213ENST00000471978 POLGP54098 1239 aaPredicted RBP25.23■■□□□ 1.63
C9orf3-213ENST00000471978 TWF2Q6IBS0 349 aaKnown RBP25.23■■□□□ 1.63
C9orf3-213ENST00000471978 EXOC8Q8IYI6 725 aa25.23■■□□□ 1.63
C9orf3-213ENST00000471978 SLFN12Q8IYM2 578 aa25.23■■□□□ 1.63
C9orf3-213ENST00000471978 NSUN7Q8NE18 718 aaKnown RBP25.23■■□□□ 1.63
C9orf3-213ENST00000471978 TNFRSF25Q93038 417 aa25.23■■□□□ 1.63
C9orf3-213ENST00000471978 POP1Q99575 1024 aaKnown RBP25.23■■□□□ 1.63
C9orf3-213ENST00000471978 BARX2Q9UMQ3 279 aaPredicted RBP25.23■■□□□ 1.63
C9orf3-213ENST00000471978 PIN4Q9Y237 131 aaKnown RBP25.23■■□□□ 1.63
C9orf3-213ENST00000471978 PPME1Q9Y570 386 aa25.23■■□□□ 1.63
C9orf3-213ENST00000471978 PHKA2P46019 1235 aa25.22■■□□□ 1.63
C9orf3-213ENST00000471978 KRT17Q04695 432 aa25.22■■□□□ 1.63
C9orf3-213ENST00000471978 COASYQ13057 564 aa25.22■■□□□ 1.63
C9orf3-213ENST00000471978 PLPP4Q5VZY2 271 aa25.22■■□□□ 1.63
C9orf3-213ENST00000471978 CATSPER4Q7RTX7 472 aa25.22■■□□□ 1.63
C9orf3-213ENST00000471978 C4orf19Q8IY42 314 aa25.22■■□□□ 1.63
C9orf3-213ENST00000471978 DYDC2Q96IM9 177 aa25.22■■□□□ 1.63
C9orf3-213ENST00000471978 CDCA3Q99618 268 aaPredicted RBP25.22■■□□□ 1.63
C9orf3-213ENST00000471978 TCF25Q9BQ70 676 aa25.22■■□□□ 1.63
C9orf3-213ENST00000471978 TRAIPQ9BWF2 469 aa25.22■■□□□ 1.63
C9orf3-213ENST00000471978 MRPL9Q9BYD2 267 aaKnown RBP25.22■■□□□ 1.63
C9orf3-213ENST00000471978 ENTPD7Q9NQZ7 604 aa25.22■■□□□ 1.63
C9orf3-213ENST00000471978 SPG21Q9NZD8 308 aa25.22■■□□□ 1.63
C9orf3-213ENST00000471978 RGL1Q9NZL6 768 aa25.22■■□□□ 1.63
C9orf3-213ENST00000471978 COL4A3BPQ9Y5P4 624 aa25.22■■□□□ 1.63
C9orf3-213ENST00000471978 FSD2A1L4K1 749 aa25.21■■□□□ 1.63
C9orf3-213ENST00000471978 DCXO43602 365 aa25.21■■□□□ 1.63
C9orf3-213ENST00000471978 YWHABP31946 246 aaKnown RBP25.21■■□□□ 1.63
C9orf3-213ENST00000471978 RFC5P40937 340 aa25.21■■□□□ 1.63
C9orf3-213ENST00000471978 SPIRE1Q08AE8 756 aa25.21■■□□□ 1.63
C9orf3-213ENST00000471978 DUSP6Q16828 381 aa25.21■■□□□ 1.63
C9orf3-213ENST00000471978 OTUD6AQ7L8S5 288 aa25.21■■□□□ 1.63
C9orf3-213ENST00000471978 SMRP1Q8NCR6 262 aa25.21■■□□□ 1.63
C9orf3-213ENST00000471978 PRPF31Q8WWY3 499 aaKnown RBP25.21■■□□□ 1.63
C9orf3-213ENST00000471978 TMEM143Q96AN5 459 aa25.21■■□□□ 1.63
C9orf3-213ENST00000471978 DHX33Q9H6R0 707 aaKnown RBP25.21■■□□□ 1.63
C9orf3-213ENST00000471978 IFT122Q9HBG6 1241 aa25.21■■□□□ 1.63
C9orf3-213ENST00000471978 TRIOO75962 3097 aa25.21■■□□□ 1.63
C9orf3-213ENST00000471978 JAK2O60674 1132 aa25.2■■□□□ 1.62
C9orf3-213ENST00000471978 SKIP12755 728 aa25.2■■□□□ 1.62
C9orf3-213ENST00000471978 FOSBP53539 338 aa25.2■■□□□ 1.62
C9orf3-213ENST00000471978 RBM10P98175 930 aaKnown RBP25.2■■□□□ 1.62
C9orf3-213ENST00000471978 CYP4A11Q02928 519 aa25.2■■□□□ 1.62
C9orf3-213ENST00000471978 CTTNQ14247 550 aaKnown RBP25.2■■□□□ 1.62
C9orf3-213ENST00000471978 VN1R2Q8NFZ6 395 aa25.2■■□□□ 1.62
C9orf3-213ENST00000471978 PSPC1Q8WXF1 523 aaKnown RBP25.2■■□□□ 1.62
C9orf3-213ENST00000471978 ZSWIM4Q9H7M6 989 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms