RNA–Protein interactions for RNA: ENST00000471910.1

CDHR3-208, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 392 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-208ENST00000471910 PGM2L1Q6PCE3 622 aa6.3□□□□□ -1.4
CDHR3-208ENST00000471910 LMBR1LQ6UX01 489 aa6.3□□□□□ -1.4
CDHR3-208ENST00000471910 LARP4Q71RC2 724 aaKnown RBP eCLIP6.3□□□□□ -1.4
CDHR3-208ENST00000471910 CMIPQ8IY22 773 aa6.3□□□□□ -1.4
CDHR3-208ENST00000471910 BCL6BQ8N143 479 aaPredicted RBP6.3□□□□□ -1.4
CDHR3-208ENST00000471910 TGFBRAP1Q8WUH2 860 aa6.3□□□□□ -1.4
CDHR3-208ENST00000471910 AUTS2Q8WXX7 1259 aa6.3□□□□□ -1.4
CDHR3-208ENST00000471910 GCDHQ92947 438 aaPredicted RBP6.3□□□□□ -1.4
CDHR3-208ENST00000471910 PAWRQ96IZ0 340 aaKnown RBP6.3□□□□□ -1.4
CDHR3-208ENST00000471910 TRIM8Q9BZR9 551 aa6.3□□□□□ -1.4
CDHR3-208ENST00000471910 HAPLN2Q9GZV7 340 aa6.3□□□□□ -1.4
CDHR3-208ENST00000471910 KCTD10Q9H3F6 313 aa6.3□□□□□ -1.4
CDHR3-208ENST00000471910 JADE2Q9NQC1 790 aa6.3□□□□□ -1.4
CDHR3-208ENST00000471910 DNAJC28Q9NX36 388 aa6.3□□□□□ -1.4
CDHR3-208ENST00000471910 DDX56Q9NY93 547 aaKnown RBP6.3□□□□□ -1.4
CDHR3-208ENST00000471910 EDARQ9UNE0 448 aa6.3□□□□□ -1.4
CDHR3-208ENST00000471910 OTOL1A6NHN0 477 aaPredicted RBP6.29□□□□□ -1.4
CDHR3-208ENST00000471910 MYBL2P10244 700 aa6.29□□□□□ -1.4
CDHR3-208ENST00000471910 CCND1P24385 295 aa6.29□□□□□ -1.4
CDHR3-208ENST00000471910 GPR3P46089 330 aa6.29□□□□□ -1.4
CDHR3-208ENST00000471910 PPP2CBP62714 309 aa6.29□□□□□ -1.4
CDHR3-208ENST00000471910 PPP2CAP67775 309 aa6.29□□□□□ -1.4
CDHR3-208ENST00000471910 ADAM15Q13444 863 aa6.29□□□□□ -1.4
CDHR3-208ENST00000471910 FZD5Q13467 585 aa6.29□□□□□ -1.4
CDHR3-208ENST00000471910 CLUL1Q15846 466 aa6.29□□□□□ -1.4
CDHR3-208ENST00000471910 AGBL4Q5VU57 503 aa6.29□□□□□ -1.4
CDHR3-208ENST00000471910 GLB1L2Q8IW92 636 aa6.29□□□□□ -1.4
CDHR3-208ENST00000471910 ORAI2Q96SN7 254 aa6.29□□□□□ -1.4
CDHR3-208ENST00000471910 QRSL1Q9H0R6 528 aaKnown RBP6.29□□□□□ -1.4
CDHR3-208ENST00000471910 CCDC8Q9H0W5 538 aaPredicted RBP6.29□□□□□ -1.4
CDHR3-208ENST00000471910 MKS1Q9NXB0 559 aa6.29□□□□□ -1.4
CDHR3-208ENST00000471910 TMPRSS11EQ9UL52 423 aa6.29□□□□□ -1.4
CDHR3-208ENST00000471910 INVSQ9Y283 1065 aa6.29□□□□□ -1.4
CDHR3-208ENST00000471910 NR2E1Q9Y466 385 aa6.29□□□□□ -1.4
CDHR3-208ENST00000471910 MRFAP1Q9Y605 127 aa6.29□□□□□ -1.4
CDHR3-208ENST00000471910 SLC4A7Q9Y6M7 1214 aa6.29□□□□□ -1.4
CDHR3-208ENST00000471910 ZNF536O15090 1300 aa6.28□□□□□ -1.4
CDHR3-208ENST00000471910 SHTN1A0MZ66 631 aa6.28□□□□□ -1.4
CDHR3-208ENST00000471910 PPM1GO15355 546 aaPredicted RBP6.28□□□□□ -1.4
CDHR3-208ENST00000471910 ARHGAP6O43182 974 aa6.28□□□□□ -1.4
CDHR3-208ENST00000471910 B4GALT3O60512 393 aa6.28□□□□□ -1.4
CDHR3-208ENST00000471910 PDGFRBP09619 1106 aa6.28□□□□□ -1.4
CDHR3-208ENST00000471910 CNR2P34972 360 aa6.28□□□□□ -1.4
CDHR3-208ENST00000471910 SLC5A3P53794 718 aa6.28□□□□□ -1.4
CDHR3-208ENST00000471910 TOR2AQ5JU69 321 aa6.28□□□□□ -1.4
CDHR3-208ENST00000471910 UBXN11Q5T124 520 aa6.28□□□□□ -1.4
CDHR3-208ENST00000471910 NKD2Q969F2 451 aaPredicted RBP6.28□□□□□ -1.4
CDHR3-208ENST00000471910 UIMC1Q96RL1 719 aa6.28□□□□□ -1.4
CDHR3-208ENST00000471910 KIAA1683Q9H0B3 1180 aa6.28□□□□□ -1.4
CDHR3-208ENST00000471910 XYLT2Q9H1B5 865 aa6.28□□□□□ -1.4
CDHR3-208ENST00000471910 DPP7Q9UHL4 492 aa6.28□□□□□ -1.4
CDHR3-208ENST00000471910 PUF60Q9UHX1 559 aaKnown RBP6.28□□□□□ -1.4
CDHR3-208ENST00000471910 ZBTB21Q9ULJ3 1066 aa6.28□□□□□ -1.4
CDHR3-208ENST00000471910 PTPN22Q9Y2R2 807 aa6.28□□□□□ -1.4
CDHR3-208ENST00000471910 CDY2AQ9Y6F7 541 aa6.28□□□□□ -1.4
CDHR3-208ENST00000471910 LAMTOR5O43504 91 aa6.27□□□□□ -1.41
CDHR3-208ENST00000471910 RAC3P60763 192 aa6.27□□□□□ -1.41
CDHR3-208ENST00000471910 CDK17Q00537 523 aa6.27□□□□□ -1.41
CDHR3-208ENST00000471910 NFYCQ13952 458 aa6.27□□□□□ -1.41
CDHR3-208ENST00000471910 TRIM25Q14258 630 aaKnown RBP6.27□□□□□ -1.41
CDHR3-208ENST00000471910 ZFYVE27Q5T4F4 411 aa6.27□□□□□ -1.41
CDHR3-208ENST00000471910 FAM180AQ6UWF9 173 aa6.27□□□□□ -1.41
CDHR3-208ENST00000471910 PLA2G15Q8NCC3 412 aa6.27□□□□□ -1.41
CDHR3-208ENST00000471910 C1orf162Q8NEQ5 155 aaPredicted RBP6.27□□□□□ -1.41
CDHR3-208ENST00000471910 SSH1Q8WYL5 1049 aa6.27□□□□□ -1.41
CDHR3-208ENST00000471910 SLC7A6OSQ96CW6 309 aaPredicted RBP6.27□□□□□ -1.41
CDHR3-208ENST00000471910 FAXDC2Q96IV6 333 aa6.27□□□□□ -1.41
CDHR3-208ENST00000471910 SMAD5Q99717 465 aaKnown RBP6.27□□□□□ -1.41
CDHR3-208ENST00000471910 SEC61A2Q9H9S3 476 aa6.27□□□□□ -1.41
CDHR3-208ENST00000471910 CCM2LQ9NUG4 571 aaPredicted RBP6.27□□□□□ -1.41
CDHR3-208ENST00000471910 CTDP1Q9Y5B0 961 aaPredicted RBP6.27□□□□□ -1.41
CDHR3-208ENST00000471910 A0A0A6YYK5 440 aaPredicted RBP6.26□□□□□ -1.41
CDHR3-208ENST00000471910 TRIM75PA6NK02 468 aa6.26□□□□□ -1.41
CDHR3-208ENST00000471910 GABRDO14764 452 aa6.26□□□□□ -1.41
CDHR3-208ENST00000471910 MT-CO1P00395 513 aa6.26□□□□□ -1.41
CDHR3-208ENST00000471910 INHBBP09529 407 aa6.26□□□□□ -1.41
CDHR3-208ENST00000471910 HNRNPLP14866 589 aaKnown RBP eCLIP6.26□□□□□ -1.41
CDHR3-208ENST00000471910 IARSP41252 1262 aaKnown RBP6.26□□□□□ -1.41
CDHR3-208ENST00000471910 SRSF2Q01130 221 aaKnown RBP6.26□□□□□ -1.41
CDHR3-208ENST00000471910 MGAT5Q09328 741 aa6.26□□□□□ -1.41
CDHR3-208ENST00000471910 ABCB5Q2M3G0 1257 aa6.26□□□□□ -1.41
CDHR3-208ENST00000471910 INAVAQ3KP66 663 aa6.26□□□□□ -1.41
CDHR3-208ENST00000471910 ERICH6BQ5W0A0 696 aa6.26□□□□□ -1.41
CDHR3-208ENST00000471910 KRT40Q6A162 431 aa6.26□□□□□ -1.41
CDHR3-208ENST00000471910 GAREM2Q75VX8 874 aa6.26□□□□□ -1.41
CDHR3-208ENST00000471910 PNMA8AQ86V59 439 aaPredicted RBP6.26□□□□□ -1.41
CDHR3-208ENST00000471910 SLC41A1Q8IVJ1 513 aa6.26□□□□□ -1.41
CDHR3-208ENST00000471910 PPP1R14CQ8TAE6 165 aa6.26□□□□□ -1.41
CDHR3-208ENST00000471910 FATE1Q969F0 183 aa6.26□□□□□ -1.41
CDHR3-208ENST00000471910 FUBP3Q96I24 572 aaKnown RBP eCLIP6.26□□□□□ -1.41
CDHR3-208ENST00000471910 TEPSINQ96N21 525 aa6.26□□□□□ -1.41
CDHR3-208ENST00000471910 SOX7Q9BT81 388 aa6.26□□□□□ -1.41
CDHR3-208ENST00000471910 ASPSCR1Q9BZE9 553 aa6.26□□□□□ -1.41
CDHR3-208ENST00000471910 SLC6A15Q9H2J7 730 aa6.26□□□□□ -1.41
CDHR3-208ENST00000471910 C12orf65Q9H3J6 166 aaKnown RBP6.26□□□□□ -1.41
CDHR3-208ENST00000471910 C14orf93Q9H972 538 aaKnown RBP6.26□□□□□ -1.41
CDHR3-208ENST00000471910 IFT122Q9HBG6 1241 aa6.26□□□□□ -1.41
CDHR3-208ENST00000471910 EVLQ9UI08 416 aaPredicted RBP6.26□□□□□ -1.41
CDHR3-208ENST00000471910 RBM8AQ9Y5S9 174 aaKnown RBP6.26□□□□□ -1.41
CDHR3-208ENST00000471910 KLHL33A6NCF5 533 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms