RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 SRGAP2CP0DJJ0 459 aa21.19■□□□□ 0.98
PSPC1-203ENST00000471658 CCDC192P0DO97 292 aa21.19■□□□□ 0.98
PSPC1-203ENST00000471658 PRCPP42785 496 aa21.19■□□□□ 0.98
PSPC1-203ENST00000471658 CDK7P50613 346 aa21.19■□□□□ 0.98
PSPC1-203ENST00000471658 RTP1P59025 263 aa21.19■□□□□ 0.98
PSPC1-203ENST00000471658 C11orf57Q6ZUT1 292 aaPredicted RBP21.19■□□□□ 0.98
PSPC1-203ENST00000471658 ZNF720Q7Z2F6 126 aa21.19■□□□□ 0.98
PSPC1-203ENST00000471658 DNAJC25Q9H1X3 360 aa21.19■□□□□ 0.98
PSPC1-203ENST00000471658 KMT5AQ9NQR1 393 aa21.19■□□□□ 0.98
PSPC1-203ENST00000471658 OLFML3Q9NRN5 406 aa21.19■□□□□ 0.98
PSPC1-203ENST00000471658 ANO10Q9NW15 660 aa21.19■□□□□ 0.98
PSPC1-203ENST00000471658 SEL1LQ9UBV2 794 aa21.19■□□□□ 0.98
PSPC1-203ENST00000471658 LRRIQ4A6NIV6 560 aa21.18■□□□□ 0.98
PSPC1-203ENST00000471658 PPP1R3GB7ZBB8 358 aa21.18■□□□□ 0.98
PSPC1-203ENST00000471658 PRPF6O94906 941 aaKnown RBP21.18■□□□□ 0.98
PSPC1-203ENST00000471658 COL6A1P12109 1028 aa21.18■□□□□ 0.98
PSPC1-203ENST00000471658 EN2P19622 333 aaPredicted RBP21.18■□□□□ 0.98
PSPC1-203ENST00000471658 PTPN11Q06124 597 aaPredicted RBP21.18■□□□□ 0.98
PSPC1-203ENST00000471658 DMP1Q13316 513 aaPredicted RBP21.18■□□□□ 0.98
PSPC1-203ENST00000471658 STX1AQ16623 288 aa21.18■□□□□ 0.98
PSPC1-203ENST00000471658 COL13A1Q5TAT6 717 aaPredicted RBP21.18■□□□□ 0.98
PSPC1-203ENST00000471658 PAWRQ96IZ0 340 aaKnown RBP21.18■□□□□ 0.98
PSPC1-203ENST00000471658 NLRP4Q96MN2 994 aa21.18■□□□□ 0.98
PSPC1-203ENST00000471658 C17orf75Q9HAS0 396 aa21.18■□□□□ 0.98
PSPC1-203ENST00000471658 MYH11P35749 1972 aa21.18■□□□□ 0.98
PSPC1-203ENST00000471658 K7ENM7 598 aa21.18■□□□□ 0.98
PSPC1-203ENST00000471658 B4GALT4O60513 344 aa21.18■□□□□ 0.98
PSPC1-203ENST00000471658 GCNT3O95395 438 aa21.18■□□□□ 0.98
PSPC1-203ENST00000471658 NAMPTP43490 491 aa21.18■□□□□ 0.98
PSPC1-203ENST00000471658 NCKAP1LP55160 1127 aa21.18■□□□□ 0.98
PSPC1-203ENST00000471658 KCNA1Q09470 495 aa21.18■□□□□ 0.98
PSPC1-203ENST00000471658 MXD4Q14582 209 aaPredicted RBP21.18■□□□□ 0.98
PSPC1-203ENST00000471658 ANO6Q4KMQ2 910 aa21.18■□□□□ 0.98
PSPC1-203ENST00000471658 SLC39A5Q6ZMH5 540 aa21.18■□□□□ 0.98
PSPC1-203ENST00000471658 SERINC5Q86VE9 423 aa21.18■□□□□ 0.98
PSPC1-203ENST00000471658 RNF149Q8NC42 400 aa21.18■□□□□ 0.98
PSPC1-203ENST00000471658 TMEM161BQ8NDZ6 487 aa21.18■□□□□ 0.98
PSPC1-203ENST00000471658 SCFD1Q8WVM8 642 aa21.18■□□□□ 0.98
PSPC1-203ENST00000471658 SPIRE2Q8WWL2 714 aa21.18■□□□□ 0.98
PSPC1-203ENST00000471658 NTPCRQ9BSD7 190 aaKnown RBP21.18■□□□□ 0.98
PSPC1-203ENST00000471658 IKZF4Q9H2S9 585 aa21.18■□□□□ 0.98
PSPC1-203ENST00000471658 EPM2AIP1Q7L775 607 aaPredicted RBP21.17■□□□□ 0.98
PSPC1-203ENST00000471658 HAUS6Q7Z4H7 955 aa21.17■□□□□ 0.98
PSPC1-203ENST00000471658 NELFCDQ8IXH7 590 aa21.17■□□□□ 0.98
PSPC1-203ENST00000471658 ADSSL1Q8N142 457 aa21.17■□□□□ 0.98
PSPC1-203ENST00000471658 ANKLE1Q8NAG6 615 aa21.17■□□□□ 0.98
PSPC1-203ENST00000471658 DHX38Q92620 1227 aaKnown RBP21.17■□□□□ 0.98
PSPC1-203ENST00000471658 MAP7D2Q96T17 732 aa21.17■□□□□ 0.98
PSPC1-203ENST00000471658 STRA6Q9BX79 667 aa21.17■□□□□ 0.98
PSPC1-203ENST00000471658 CDHR5Q9HBB8 845 aa21.17■□□□□ 0.98
PSPC1-203ENST00000471658 KIAA0100Q14667 2235 aaKnown RBP21.17■□□□□ 0.98
PSPC1-203ENST00000471658 A0A087WZ62 844 aa21.16■□□□□ 0.98
PSPC1-203ENST00000471658 ASAP2O43150 1006 aa21.16■□□□□ 0.98
PSPC1-203ENST00000471658 HOXD13P35453 343 aa21.16■□□□□ 0.98
PSPC1-203ENST00000471658 GPC3P51654 580 aa21.16■□□□□ 0.98
PSPC1-203ENST00000471658 SMTNP53814 917 aa21.16■□□□□ 0.98
PSPC1-203ENST00000471658 NLRP11P59045 1033 aaKnown RBP21.16■□□□□ 0.98
PSPC1-203ENST00000471658 KIZQ2M2Z5 673 aa21.16■□□□□ 0.98
PSPC1-203ENST00000471658 KLHL10Q6JEL2 608 aa21.16■□□□□ 0.98
PSPC1-203ENST00000471658 MLKLQ8NB16 471 aa21.16■□□□□ 0.98
PSPC1-203ENST00000471658 DEPTORQ8TB45 409 aa21.16■□□□□ 0.98
PSPC1-203ENST00000471658 FDXACB1Q9BRP7 624 aaPredicted RBP21.16■□□□□ 0.98
PSPC1-203ENST00000471658 NOD1Q9Y239 953 aa21.16■□□□□ 0.98
PSPC1-203ENST00000471658 GPR32O75388 356 aa21.15■□□□□ 0.98
PSPC1-203ENST00000471658 CSDE1O75534 798 aaKnown RBP21.15■□□□□ 0.98
PSPC1-203ENST00000471658 PPP1R37O75864 691 aa21.15■□□□□ 0.98
PSPC1-203ENST00000471658 MAPTP10636 758 aaKnown RBP21.15■□□□□ 0.98
PSPC1-203ENST00000471658 PPP2R5AQ15172 486 aa21.15■□□□□ 0.98
PSPC1-203ENST00000471658 TAS1R3Q7RTX0 852 aa21.15■□□□□ 0.98
PSPC1-203ENST00000471658 GAS2L3Q86XJ1 694 aa21.15■□□□□ 0.98
PSPC1-203ENST00000471658 ADAMTS10Q9H324 1103 aa21.15■□□□□ 0.98
PSPC1-203ENST00000471658 C11orf49Q9H6J7 331 aa21.15■□□□□ 0.98
PSPC1-203ENST00000471658 ARHGAP28Q9P2N2 729 aa21.15■□□□□ 0.98
PSPC1-203ENST00000471658 USP20Q9Y2K6 914 aa21.15■□□□□ 0.98
PSPC1-203ENST00000471658 DENND3A2RUS2 1198 aa21.15■□□□□ 0.98
PSPC1-203ENST00000471658 L1TD1Q5T7N2 865 aaKnown RBP21.15■□□□□ 0.98
PSPC1-203ENST00000471658 TAF2Q6P1X5 1199 aa21.15■□□□□ 0.98
PSPC1-203ENST00000471658 FAM126BQ8IXS8 530 aa21.15■□□□□ 0.98
PSPC1-203ENST00000471658 MYOCDQ8IZQ8 938 aa21.15■□□□□ 0.98
PSPC1-203ENST00000471658 ZNF507Q8TCN5 953 aa21.15■□□□□ 0.98
PSPC1-203ENST00000471658 NLRP7Q8WX94 980 aa21.15■□□□□ 0.98
PSPC1-203ENST00000471658 MED15Q96RN5 788 aa21.15■□□□□ 0.98
PSPC1-203ENST00000471658 TSPY26PQ9H489 355 aa21.15■□□□□ 0.98
PSPC1-203ENST00000471658 MINDY3Q9H8M7 445 aa21.15■□□□□ 0.98
PSPC1-203ENST00000471658 IFT122Q9HBG6 1241 aa21.15■□□□□ 0.98
PSPC1-203ENST00000471658 GINS2Q9Y248 185 aa21.15■□□□□ 0.98
PSPC1-203ENST00000471658 STX17P56962 302 aa21.14■□□□□ 0.97
PSPC1-203ENST00000471658 GTF2BQ00403 316 aa21.14■□□□□ 0.97
PSPC1-203ENST00000471658 PTK7Q13308 1070 aa21.14■□□□□ 0.97
PSPC1-203ENST00000471658 TFDP1Q14186 410 aa21.14■□□□□ 0.97
PSPC1-203ENST00000471658 TRIM71Q2Q1W2 868 aaKnown RBP21.14■□□□□ 0.97
PSPC1-203ENST00000471658 ANP32EQ9BTT0 268 aa21.14■□□□□ 0.97
PSPC1-203ENST00000471658 ST6GALNAC4Q9H4F1 302 aa21.14■□□□□ 0.97
PSPC1-203ENST00000471658 PCDHB13Q9Y5F0 798 aa21.14■□□□□ 0.97
PSPC1-203ENST00000471658 PQBP1O60828 265 aaKnown RBP21.13■□□□□ 0.97
PSPC1-203ENST00000471658 EDN1P05305 212 aa21.13■□□□□ 0.97
PSPC1-203ENST00000471658 PMS1P54277 932 aaKnown RBP21.13■□□□□ 0.97
PSPC1-203ENST00000471658 PTENP60484 403 aa21.13■□□□□ 0.97
PSPC1-203ENST00000471658 TRIM60Q495X7 471 aa21.13■□□□□ 0.97
PSPC1-203ENST00000471658 COBLL1Q53SF7 1204 aa21.13■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms