RNA–Protein interactions for RNA: ENST00000471582.5

COL20A1-205, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 1,924 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-205ENST00000471582 DCPSQ96C86 337 aaKnown RBP20.28■□□□□ 0.84
COL20A1-205ENST00000471582 GPRASP2Q96D09 838 aa20.28■□□□□ 0.84
COL20A1-205ENST00000471582 CCDC43Q96MW1 224 aaKnown RBP20.28■□□□□ 0.84
COL20A1-205ENST00000471582 IWS1Q96ST2 819 aa20.28■□□□□ 0.84
COL20A1-205ENST00000471582 PACSIN1Q9BY11 444 aa20.28■□□□□ 0.84
COL20A1-205ENST00000471582 VIPAS39Q9H9C1 493 aa20.28■□□□□ 0.84
COL20A1-205ENST00000471582 ADAMTS5Q9UNA0 930 aa20.28■□□□□ 0.84
COL20A1-205ENST00000471582 RLFQ13129 1914 aa20.28■□□□□ 0.84
COL20A1-205ENST00000471582 SSC5DA1L4H1 1573 aa20.28■□□□□ 0.84
COL20A1-205ENST00000471582 F8VZ95 297 aa20.27■□□□□ 0.84
COL20A1-205ENST00000471582 MAPK13O15264 365 aa20.27■□□□□ 0.84
COL20A1-205ENST00000471582 NCK2O43639 380 aa20.27■□□□□ 0.84
COL20A1-205ENST00000471582 MYCLP12524 364 aaPredicted RBP20.27■□□□□ 0.84
COL20A1-205ENST00000471582 CCND2P30279 289 aa20.27■□□□□ 0.84
COL20A1-205ENST00000471582 GTF2BQ00403 316 aa20.27■□□□□ 0.84
COL20A1-205ENST00000471582 CFAP221Q4G0U5 840 aa20.27■□□□□ 0.84
COL20A1-205ENST00000471582 NSMFQ6X4W1 530 aa20.27■□□□□ 0.84
COL20A1-205ENST00000471582 SENP7Q9BQF6 1050 aa20.27■□□□□ 0.84
COL20A1-205ENST00000471582 ACBD3Q9H3P7 528 aa20.27■□□□□ 0.84
COL20A1-205ENST00000471582 KRT13P13646 458 aa20.27■□□□□ 0.84
COL20A1-205ENST00000471582 SOX5P35711 763 aa20.27■□□□□ 0.84
COL20A1-205ENST00000471582 MYL7Q01449 175 aa20.27■□□□□ 0.84
COL20A1-205ENST00000471582 CBWD6Q4V339 395 aa20.27■□□□□ 0.84
COL20A1-205ENST00000471582 CBWD3Q5JTY5 395 aa20.27■□□□□ 0.84
COL20A1-205ENST00000471582 CBWD5Q5RIA9 395 aa20.27■□□□□ 0.84
COL20A1-205ENST00000471582 ZNF746Q6NUN9 644 aaPredicted RBP20.27■□□□□ 0.84
COL20A1-205ENST00000471582 VSIG10LQ86VR7 867 aa20.27■□□□□ 0.84
COL20A1-205ENST00000471582 INTS2Q9H0H0 1204 aaKnown RBP20.27■□□□□ 0.84
COL20A1-205ENST00000471582 RNF216Q9NWF9 866 aaPredicted RBP20.27■□□□□ 0.84
COL20A1-205ENST00000471582 TMOD4Q9NZQ9 345 aa20.27■□□□□ 0.84
COL20A1-205ENST00000471582 APEX2Q9UBZ4 518 aa20.27■□□□□ 0.84
COL20A1-205ENST00000471582 A0A0A6YYK5 440 aaPredicted RBP20.26■□□□□ 0.83
COL20A1-205ENST00000471582 GRID2IPA4D2P6 1211 aa20.26■□□□□ 0.83
COL20A1-205ENST00000471582 CES2O00748 559 aa20.26■□□□□ 0.83
COL20A1-205ENST00000471582 ATP2A1O14983 1001 aa20.26■□□□□ 0.83
COL20A1-205ENST00000471582 P4HA2O15460 535 aa20.26■□□□□ 0.83
COL20A1-205ENST00000471582 N4BP1O75113 896 aaKnown RBP20.26■□□□□ 0.83
COL20A1-205ENST00000471582 CCNE2O96020 404 aa20.26■□□□□ 0.83
COL20A1-205ENST00000471582 CCDC172P0C7W6 258 aa20.26■□□□□ 0.83
COL20A1-205ENST00000471582 HMGCS2P54868 508 aa20.26■□□□□ 0.83
COL20A1-205ENST00000471582 UGCGQ16739 394 aa20.26■□□□□ 0.83
COL20A1-205ENST00000471582 USP50Q70EL3 339 aaPredicted RBP20.26■□□□□ 0.83
COL20A1-205ENST00000471582 SULF1Q8IWU6 871 aa20.26■□□□□ 0.83
COL20A1-205ENST00000471582 FZD1Q9UP38 647 aa20.26■□□□□ 0.83
COL20A1-205ENST00000471582 ATP9AO75110 1047 aa20.25■□□□□ 0.83
COL20A1-205ENST00000471582 CXCR5P32302 372 aa20.25■□□□□ 0.83
COL20A1-205ENST00000471582 BAATQ14032 418 aaPredicted RBP20.25■□□□□ 0.83
COL20A1-205ENST00000471582 GJB7Q6PEY0 223 aa20.25■□□□□ 0.83
COL20A1-205ENST00000471582 INPP4AQ96PE3 977 aaPredicted RBP20.25■□□□□ 0.83
COL20A1-205ENST00000471582 COL11A1P12107 1806 aaPredicted RBP20.25■□□□□ 0.83
COL20A1-205ENST00000471582 TESPA1A2RU30 521 aaPredicted RBP20.25■□□□□ 0.83
COL20A1-205ENST00000471582 GLTPD2A6NH11 291 aa20.25■□□□□ 0.83
COL20A1-205ENST00000471582 BACH1O14867 736 aa20.25■□□□□ 0.83
COL20A1-205ENST00000471582 EVI5O60447 810 aa20.25■□□□□ 0.83
COL20A1-205ENST00000471582 TRIM49P0CI25 452 aa20.25■□□□□ 0.83
COL20A1-205ENST00000471582 TRIM49CP0CI26 452 aa20.25■□□□□ 0.83
COL20A1-205ENST00000471582 DSG3P32926 999 aa20.25■□□□□ 0.83
COL20A1-205ENST00000471582 NCKAP1LP55160 1127 aa20.25■□□□□ 0.83
COL20A1-205ENST00000471582 MCCD1P59942 119 aaPredicted RBP20.25■□□□□ 0.83
COL20A1-205ENST00000471582 GLE1Q53GS7 698 aaKnown RBP20.25■□□□□ 0.83
COL20A1-205ENST00000471582 CCNI2Q6ZMN8 369 aaPredicted RBP20.25■□□□□ 0.83
COL20A1-205ENST00000471582 HAUS6Q7Z4H7 955 aa20.25■□□□□ 0.83
COL20A1-205ENST00000471582 NLRX1Q86UT6 975 aa20.25■□□□□ 0.83
COL20A1-205ENST00000471582 DDX55Q8NHQ9 600 aaKnown RBP eCLIP20.25■□□□□ 0.83
COL20A1-205ENST00000471582 VTI1AQ96AJ9 217 aa20.25■□□□□ 0.83
COL20A1-205ENST00000471582 HVCN1Q96D96 273 aa20.25■□□□□ 0.83
COL20A1-205ENST00000471582 WNK4Q96J92 1243 aa20.25■□□□□ 0.83
COL20A1-205ENST00000471582 SUGCTQ9HAC7 445 aa20.25■□□□□ 0.83
COL20A1-205ENST00000471582 DNAJC12Q9UKB3 198 aa20.25■□□□□ 0.83
COL20A1-205ENST00000471582 RIPK3Q9Y572 518 aa20.25■□□□□ 0.83
COL20A1-205ENST00000471582 NR3C2P08235 984 aa20.24■□□□□ 0.83
COL20A1-205ENST00000471582 H2AFZP0C0S5 128 aa20.24■□□□□ 0.83
COL20A1-205ENST00000471582 DRAP1Q14919 205 aaPredicted RBP20.24■□□□□ 0.83
COL20A1-205ENST00000471582 SNRNP48Q6IEG0 339 aaKnown RBP20.24■□□□□ 0.83
COL20A1-205ENST00000471582 H2AFVQ71UI9 128 aa20.24■□□□□ 0.83
COL20A1-205ENST00000471582 MAEAQ7L5Y9 396 aa20.24■□□□□ 0.83
COL20A1-205ENST00000471582 XXYLT1Q8NBI6 393 aa20.24■□□□□ 0.83
COL20A1-205ENST00000471582 SLC30A5Q8TAD4 765 aa20.24■□□□□ 0.83
COL20A1-205ENST00000471582 ZC3H15Q8WU90 426 aaKnown RBP20.24■□□□□ 0.83
COL20A1-205ENST00000471582 PSMB7Q99436 277 aa20.24■□□□□ 0.83
COL20A1-205ENST00000471582 MOV10L1Q9BXT6 1211 aaKnown RBP20.24■□□□□ 0.83
COL20A1-205ENST00000471582 ZNF214Q9UL59 606 aaPredicted RBP20.24■□□□□ 0.83
COL20A1-205ENST00000471582 DDX3XO00571 662 aaKnown RBP eCLIP20.23■□□□□ 0.83
COL20A1-205ENST00000471582 PMM2O15305 246 aa20.23■□□□□ 0.83
COL20A1-205ENST00000471582 FTCDO95954 541 aa20.23■□□□□ 0.83
COL20A1-205ENST00000471582 EPHX2P34913 555 aa20.23■□□□□ 0.83
COL20A1-205ENST00000471582 CETN1Q12798 172 aa20.23■□□□□ 0.83
COL20A1-205ENST00000471582 NSUN6Q8TEA1 469 aaKnown RBP20.23■□□□□ 0.83
COL20A1-205ENST00000471582 PDE11AQ9HCR9 933 aa20.23■□□□□ 0.83
COL20A1-205ENST00000471582 PCDHA10Q9Y5I2 948 aa20.23■□□□□ 0.83
COL20A1-205ENST00000471582 SCN4AP35499 1836 aa20.23■□□□□ 0.83
COL20A1-205ENST00000471582 MYPNQ86TC9 1320 aa20.23■□□□□ 0.83
COL20A1-205ENST00000471582 DKC1O60832 514 aaKnown RBP eCLIP20.23■□□□□ 0.83
COL20A1-205ENST00000471582 USP2O75604 605 aaPredicted RBP20.23■□□□□ 0.83
COL20A1-205ENST00000471582 VAMP7P51809 220 aa20.23■□□□□ 0.83
COL20A1-205ENST00000471582 NPEPPSP55786 919 aa20.23■□□□□ 0.83
COL20A1-205ENST00000471582 PRKG1Q13976 671 aa20.23■□□□□ 0.83
COL20A1-205ENST00000471582 PLS1Q14651 629 aa20.23■□□□□ 0.83
COL20A1-205ENST00000471582 XKR9Q5GH70 373 aa20.23■□□□□ 0.83
COL20A1-205ENST00000471582 LRRC57Q8N9N7 239 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms