RNA–Protein interactions for RNA: ENST00000471438.2

CSMD2-208, Transcript of CUB and Sushi multiple domains 2, human

TSL 5

Gene CSMD2, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CSMD2-208	ENST00000471438	ZRANB2	O95218	330 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	TPM1	P09493	284 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	SKIL	P12757	684 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	FDPS	P14324	419 aa	Known RBP	4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	ZNF20	P17024	532 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	SDHB	P21912	280 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	TGM1	P22735	817 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	CMA1	P23946	247 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	U2AF2	P26368	475 aa	Known RBP eCLIP	4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	PDIA3	P30101	505 aa	Known RBP	4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	RNF4	P78317	190 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	NEXN	Q0ZGT2	675 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	MPP2	Q14168	576 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	BMS1	Q14692	1282 aa	Known RBP	4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	NCAPH	Q15003	741 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	CAMK4	Q16566	473 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	TPD52L1	Q16890	204 aa	Predicted RBP	4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	CWF19L2	Q2TBE0	894 aa	Known RBP	4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	CT47A1	Q5JQC4	288 aa	Predicted RBP	4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	C1orf141	Q5JVX7	400 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	EPHA10	Q5JZY3	1008 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	AXDND1	Q5T1B0	1012 aa	Predicted RBP	4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	FAM173B	Q6P4H8	233 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	ZNF790	Q6PG37	636 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	C11orf57	Q6ZUT1	292 aa	Predicted RBP	4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	STOX1	Q6ZVD7	989 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	USP51	Q70EK9	711 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	BRAP	Q7Z569	592 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	LDHD	Q86WU2	507 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	CKAP2L	Q8IYA6	745 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	KRT222	Q8N1A0	295 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438		Q8N1X5	172 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	GOLM1	Q8NBJ4	401 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	SPC24	Q8NBT2	197 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	LINC00301	Q8NCQ3	95 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	CCDC150	Q8NCX0	1101 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	FBXO18	Q8NFZ0	1043 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	LINC01599	Q8WXQ3	324 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	USP28	Q96RU2	1077 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	NOL10	Q9BSC4	688 aa	Known RBP	4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	FSD1	Q9BTV5	496 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	C1QTNF3	Q9BXJ4	246 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	SRRT	Q9BXP5	876 aa	Known RBP	4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	CCDC8	Q9H0W5	538 aa	Predicted RBP	4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	BOLA2	Q9H3K6	86 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	GOLPH3L	Q9H4A5	285 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	DBNL	Q9UJU6	430 aa	Known RBP	4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	PCDHA7	Q9UN72	937 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	HPSE	Q9Y251	543 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	STXBP5L	Q9Y2K9	1186 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	NHS	Q6T4R5	1651 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	PHLPP2	Q6ZVD8	1323 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	PASK	Q96RG2	1323 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	TIAM2	Q8IVF5	1701 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	MYH8	P13535	1937 aa		4.15	□□□□□ -1.75
CSMD2-208	ENST00000471438	NID2	Q14112	1375 aa		4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	RBM47	A0AV96	593 aa	Known RBP	4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	NOTO	A8MTQ0	251 aa		4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438		E7EWF7	191 aa		4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438		H3BQV1	296 aa		4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	RNF113A	O15541	343 aa	Known RBP	4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	BUB1B	O60566	1050 aa	Predicted RBP	4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	KIN	O60870	393 aa	Known RBP	4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	PPP6R2	O75170	966 aa		4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	GC	P02774	474 aa		4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	ZFY	P08048	801 aa	Predicted RBP	4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	HSPD1	P10809	573 aa	Known RBP	4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	KCNJ4	P48050	445 aa		4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	TUBB4B	P68371	445 aa		4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	FOXO4	P98177	505 aa		4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	CAP1	Q01518	475 aa		4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	SLC20A2	Q08357	652 aa		4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	TFCP2	Q12800	502 aa		4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	TBX2	Q13207	712 aa	Predicted RBP	4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	SLC14A2	Q15849	920 aa		4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	LDLRAD1	Q5T700	205 aa		4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	E4F1	Q66K89	784 aa	Predicted RBP	4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	TRIM65	Q6PJ69	517 aa		4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	CCDC73	Q6ZRK6	1079 aa		4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	ATG9A	Q7Z3C6	839 aa		4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	REC114	Q7Z4M0	266 aa		4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	DRC7	Q8IY82	874 aa		4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	CEP57L1	Q8IYX8	460 aa		4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	NLGN1	Q8N2Q7	840 aa		4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	PLBD2	Q8NHP8	589 aa		4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	KCNG4	Q8TDN1	519 aa		4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	MRPS27	Q92552	414 aa	Known RBP	4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	ZNF512B	Q96KM6	892 aa	Predicted RBP	4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	CAPNS2	Q96L46	248 aa		4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	C16orf45	Q96MC5	204 aa	Predicted RBP	4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	C8orf49	Q96NF6	230 aa		4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	LRRC3	Q9BY71	257 aa		4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	KRTAP3-1	Q9BYR8	98 aa		4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	CSTF2T	Q9H0L4	616 aa	Known RBP eCLIP	4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	HSD3B7	Q9H2F3	369 aa		4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	SLC52A2	Q9HAB3	445 aa		4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	ZNF446	Q9NWS9	450 aa		4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	ZMYM5	Q9UJ78	669 aa		4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	ZNF215	Q9UL58	517 aa	Predicted RBP	4.14	□□□□□ -1.75
CSMD2-208	ENST00000471438	NUP98	P52948	1817 aa		4.14	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms