RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 IFT122Q9HBG6 1241 aa19.68■□□□□ 0.74
VPS72-204ENST00000471423 GBF1Q92538 1859 aa19.68■□□□□ 0.74
VPS72-204ENST00000471423 MGEA5O60502 916 aa19.67■□□□□ 0.74
VPS72-204ENST00000471423 NCLP19338 710 aaKnown RBP19.67■□□□□ 0.74
VPS72-204ENST00000471423 GLRA2P23416 452 aa19.67■□□□□ 0.74
VPS72-204ENST00000471423 TXLNAP40222 546 aa19.67■□□□□ 0.74
VPS72-204ENST00000471423 CAPSQ13938 189 aa19.67■□□□□ 0.74
VPS72-204ENST00000471423 FAM117BQ6P1L5 589 aa19.67■□□□□ 0.74
VPS72-204ENST00000471423 KCNG4Q8TDN1 519 aa19.67■□□□□ 0.74
VPS72-204ENST00000471423 RUSC1Q9BVN2 902 aa19.67■□□□□ 0.74
VPS72-204ENST00000471423 CFAP45Q9UL16 551 aa19.67■□□□□ 0.74
VPS72-204ENST00000471423 ENPP3O14638 875 aa19.66■□□□□ 0.74
VPS72-204ENST00000471423 PLA2G4BP0C869 781 aa19.66■□□□□ 0.74
VPS72-204ENST00000471423 SFPQP23246 707 aaKnown RBP eCLIP19.66■□□□□ 0.74
VPS72-204ENST00000471423 DNAJB2P25686 324 aa19.66■□□□□ 0.74
VPS72-204ENST00000471423 PHKA2P46019 1235 aa19.66■□□□□ 0.74
VPS72-204ENST00000471423 TFDP1Q14186 410 aa19.66■□□□□ 0.74
VPS72-204ENST00000471423 RTN4RL1Q86UN2 441 aaPredicted RBP19.66■□□□□ 0.74
VPS72-204ENST00000471423 INO80BQ9C086 356 aaPredicted RBP19.66■□□□□ 0.74
VPS72-204ENST00000471423 TSPYL2Q9H2G4 693 aaPredicted RBP19.66■□□□□ 0.74
VPS72-204ENST00000471423 MINDY3Q9H8M7 445 aa19.66■□□□□ 0.74
VPS72-204ENST00000471423 POLD4Q9HCU8 107 aa19.66■□□□□ 0.74
VPS72-204ENST00000471423 ATP6V1DQ9Y5K8 247 aa19.66■□□□□ 0.74
VPS72-204ENST00000471423 DENND3A2RUS2 1198 aa19.65■□□□□ 0.74
VPS72-204ENST00000471423 CUTAO60888 179 aa19.65■□□□□ 0.74
VPS72-204ENST00000471423 MYOGP15173 224 aa19.65■□□□□ 0.74
VPS72-204ENST00000471423 SLC12A3P55017 1021 aa19.65■□□□□ 0.74
VPS72-204ENST00000471423 KRT85P78386 507 aa19.65■□□□□ 0.74
VPS72-204ENST00000471423 NUCB2P80303 420 aa19.65■□□□□ 0.74
VPS72-204ENST00000471423 RINT1Q6NUQ1 792 aa19.65■□□□□ 0.74
VPS72-204ENST00000471423 C1orf186Q6ZWK4 172 aa19.65■□□□□ 0.74
VPS72-204ENST00000471423 SYT2Q8N9I0 419 aaPredicted RBP19.65■□□□□ 0.74
VPS72-204ENST00000471423 ADAM2Q99965 735 aa19.65■□□□□ 0.74
VPS72-204ENST00000471423 ZBED2Q9BTP6 218 aa19.65■□□□□ 0.74
VPS72-204ENST00000471423 BLOC1S4Q9NUP1 217 aa19.65■□□□□ 0.74
VPS72-204ENST00000471423 CCDC39Q9UFE4 941 aa19.65■□□□□ 0.74
VPS72-204ENST00000471423 MSRAQ9UJ68 235 aa19.65■□□□□ 0.74
VPS72-204ENST00000471423 YBX2Q9Y2T7 364 aaKnown RBP19.65■□□□□ 0.74
VPS72-204ENST00000471423 CDH23Q9H251 3354 aa19.64■□□□□ 0.73
VPS72-204ENST00000471423 LRRIQ4A6NIV6 560 aa19.64■□□□□ 0.73
VPS72-204ENST00000471423 HIP1RO75146 1068 aa19.64■□□□□ 0.73
VPS72-204ENST00000471423 UPP2O95045 317 aa19.64■□□□□ 0.73
VPS72-204ENST00000471423 GJB5O95377 273 aa19.64■□□□□ 0.73
VPS72-204ENST00000471423 IBSPP21815 317 aaPredicted RBP19.64■□□□□ 0.73
VPS72-204ENST00000471423 ME1P48163 572 aa19.64■□□□□ 0.73
VPS72-204ENST00000471423 PTENP60484 403 aa19.64■□□□□ 0.73
VPS72-204ENST00000471423 RAD51AP2Q09MP3 1159 aa19.64■□□□□ 0.73
VPS72-204ENST00000471423 DHX8Q14562 1220 aaKnown RBP19.64■□□□□ 0.73
VPS72-204ENST00000471423 RAB30Q15771 203 aa19.64■□□□□ 0.73
VPS72-204ENST00000471423 CATSPER4Q7RTX7 472 aa19.64■□□□□ 0.73
VPS72-204ENST00000471423 SRGAP1Q7Z6B7 1085 aa19.64■□□□□ 0.73
VPS72-204ENST00000471423 BSNDQ8WZ55 320 aa19.64■□□□□ 0.73
VPS72-204ENST00000471423 RAD54LQ92698 747 aa19.64■□□□□ 0.73
VPS72-204ENST00000471423 KIFAP3Q92845 792 aa19.64■□□□□ 0.73
VPS72-204ENST00000471423 TOP1MTQ969P6 601 aa19.64■□□□□ 0.73
VPS72-204ENST00000471423 RCOR1Q9UKL0 485 aa19.64■□□□□ 0.73
VPS72-204ENST00000471423 PCDHA11Q9Y5I1 949 aa19.64■□□□□ 0.73
VPS72-204ENST00000471423 TLL1O43897 1013 aa19.63■□□□□ 0.73
VPS72-204ENST00000471423 POU5F1BQ06416 359 aa19.63■□□□□ 0.73
VPS72-204ENST00000471423 MCM6Q14566 821 aa19.63■□□□□ 0.73
VPS72-204ENST00000471423 DSC3Q14574 896 aa19.63■□□□□ 0.73
VPS72-204ENST00000471423 AXDND1Q5T1B0 1012 aaPredicted RBP19.63■□□□□ 0.73
VPS72-204ENST00000471423 LARP4BQ92615 738 aaKnown RBP19.63■□□□□ 0.73
VPS72-204ENST00000471423 TIFAQ96CG3 184 aa19.63■□□□□ 0.73
VPS72-204ENST00000471423 NKX2-4Q9H2Z4 354 aa19.63■□□□□ 0.73
VPS72-204ENST00000471423 PCDHA7Q9UN72 937 aa19.63■□□□□ 0.73
VPS72-204ENST00000471423 PIN4Q9Y237 131 aaKnown RBP19.63■□□□□ 0.73
VPS72-204ENST00000471423 A0A087X0B3 334 aa19.62■□□□□ 0.73
VPS72-204ENST00000471423 INO80B-WBP1J3KQ70 363 aa19.62■□□□□ 0.73
VPS72-204ENST00000471423 ZSCAN20P17040 1043 aaPredicted RBP19.62■□□□□ 0.73
VPS72-204ENST00000471423 GUCY2CP25092 1073 aa19.62■□□□□ 0.73
VPS72-204ENST00000471423 MAPK7Q13164 816 aa19.62■□□□□ 0.73
VPS72-204ENST00000471423 RRAGBQ5VZM2 374 aa19.62■□□□□ 0.73
VPS72-204ENST00000471423 SHC4Q6S5L8 630 aa19.62■□□□□ 0.73
VPS72-204ENST00000471423 FAM43BQ6ZT52 329 aaPredicted RBP19.62■□□□□ 0.73
VPS72-204ENST00000471423 GPBP1Q86WP2 473 aa19.62■□□□□ 0.73
VPS72-204ENST00000471423 IFNLR1Q8IU57 520 aaPredicted RBP19.62■□□□□ 0.73
VPS72-204ENST00000471423 DAW1Q8N136 415 aa19.62■□□□□ 0.73
VPS72-204ENST00000471423 LEO1Q8WVC0 666 aaPredicted RBP19.62■□□□□ 0.73
VPS72-204ENST00000471423 SPATA32Q96LK8 384 aa19.62■□□□□ 0.73
VPS72-204ENST00000471423 NFKBIZQ9BYH8 718 aa19.62■□□□□ 0.73
VPS72-204ENST00000471423 RGS18Q9NS28 235 aa19.62■□□□□ 0.73
VPS72-204ENST00000471423 C1orf112Q9NSG2 853 aa19.62■□□□□ 0.73
VPS72-204ENST00000471423 STK17AQ9UEE5 414 aa19.62■□□□□ 0.73
VPS72-204ENST00000471423 NPHP3-ACAD11A0A0J9YXS1 232 aa19.61■□□□□ 0.73
VPS72-204ENST00000471423 C9IYK1 514 aa19.61■□□□□ 0.73
VPS72-204ENST00000471423 CA3P07451 260 aa19.61■□□□□ 0.73
VPS72-204ENST00000471423 NAMPTP43490 491 aa19.61■□□□□ 0.73
VPS72-204ENST00000471423 CACNB1Q02641 598 aaPredicted RBP19.61■□□□□ 0.73
VPS72-204ENST00000471423 MBTD1Q05BQ5 628 aa19.61■□□□□ 0.73
VPS72-204ENST00000471423 PPP2R5AQ15172 486 aa19.61■□□□□ 0.73
VPS72-204ENST00000471423 NAALADL2Q58DX5 795 aa19.61■□□□□ 0.73
VPS72-204ENST00000471423 ARSHQ5FYA8 562 aa19.61■□□□□ 0.73
VPS72-204ENST00000471423 CDCA2Q69YH5 1023 aaPredicted RBP19.61■□□□□ 0.73
VPS72-204ENST00000471423 GPR153Q6NV75 609 aa19.61■□□□□ 0.73
VPS72-204ENST00000471423 CCDC73Q6ZRK6 1079 aa19.61■□□□□ 0.73
VPS72-204ENST00000471423 NPAS4Q8IUM7 802 aa19.61■□□□□ 0.73
VPS72-204ENST00000471423 PDILTQ8N807 584 aa19.61■□□□□ 0.73
VPS72-204ENST00000471423 IFT74Q96LB3 600 aa19.61■□□□□ 0.73
VPS72-204ENST00000471423 DRC1Q96MC2 740 aa19.61■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms