RNA–Protein interactions for RNA: ENST00000471235.1

HDAC7-220, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 1,012 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-220ENST00000471235 PBX2P40425 430 aa21.93■■□□□ 1.1
HDAC7-220ENST00000471235 RABGGTBP53611 331 aa21.93■■□□□ 1.1
HDAC7-220ENST00000471235 MXD4Q14582 209 aaPredicted RBP21.93■■□□□ 1.1
HDAC7-220ENST00000471235 FAM102BQ5T8I3 360 aa21.93■■□□□ 1.1
HDAC7-220ENST00000471235 MYOCDQ8IZQ8 938 aa21.93■■□□□ 1.1
HDAC7-220ENST00000471235 RASSF8Q8NHQ8 419 aa21.93■■□□□ 1.1
HDAC7-220ENST00000471235 RUSC1Q9BVN2 902 aa21.93■■□□□ 1.1
HDAC7-220ENST00000471235 FTHL17Q9BXU8 183 aa21.93■■□□□ 1.1
HDAC7-220ENST00000471235 PBX4Q9BYU1 374 aa21.93■■□□□ 1.1
HDAC7-220ENST00000471235 CSDE1O75534 798 aaKnown RBP21.92■■□□□ 1.1
HDAC7-220ENST00000471235 SRGAP2CP0DJJ0 459 aa21.92■■□□□ 1.1
HDAC7-220ENST00000471235 DNAJB2P25686 324 aa21.92■■□□□ 1.1
HDAC7-220ENST00000471235 ANP32AP39687 249 aaKnown RBP21.92■■□□□ 1.1
HDAC7-220ENST00000471235 RTN4RL1Q86UN2 441 aaPredicted RBP21.92■■□□□ 1.1
HDAC7-220ENST00000471235 RNF149Q8NC42 400 aa21.92■■□□□ 1.1
HDAC7-220ENST00000471235 BLOC1S4Q9NUP1 217 aa21.92■■□□□ 1.1
HDAC7-220ENST00000471235 CFAP45Q9UL16 551 aa21.92■■□□□ 1.1
HDAC7-220ENST00000471235 PLA2G4BP0C869 781 aa21.91■■□□□ 1.1
HDAC7-220ENST00000471235 SFPQP23246 707 aaKnown RBP eCLIP21.91■■□□□ 1.1
HDAC7-220ENST00000471235 SLC12A3P55017 1021 aa21.91■■□□□ 1.1
HDAC7-220ENST00000471235 TFDP1Q14186 410 aa21.91■■□□□ 1.1
HDAC7-220ENST00000471235 DSC3Q14574 896 aa21.91■■□□□ 1.1
HDAC7-220ENST00000471235 RAB30Q15771 203 aa21.91■■□□□ 1.1
HDAC7-220ENST00000471235 RINT1Q6NUQ1 792 aa21.91■■□□□ 1.1
HDAC7-220ENST00000471235 SYT2Q8N9I0 419 aaPredicted RBP21.91■■□□□ 1.1
HDAC7-220ENST00000471235 KCNG4Q8TDN1 519 aa21.91■■□□□ 1.1
HDAC7-220ENST00000471235 BSNDQ8WZ55 320 aa21.91■■□□□ 1.1
HDAC7-220ENST00000471235 TSPYL2Q9H2G4 693 aaPredicted RBP21.91■■□□□ 1.1
HDAC7-220ENST00000471235 MINDY3Q9H8M7 445 aa21.91■■□□□ 1.1
HDAC7-220ENST00000471235 YBX2Q9Y2T7 364 aaKnown RBP21.91■■□□□ 1.1
HDAC7-220ENST00000471235 ENPP3O14638 875 aa21.9■■□□□ 1.1
HDAC7-220ENST00000471235 CUTAO60888 179 aa21.9■■□□□ 1.1
HDAC7-220ENST00000471235 GJB5O95377 273 aa21.9■■□□□ 1.1
HDAC7-220ENST00000471235 SSBP05455 408 aaKnown RBP eCLIP21.9■■□□□ 1.1
HDAC7-220ENST00000471235 TXLNAP40222 546 aa21.9■■□□□ 1.1
HDAC7-220ENST00000471235 PHKA2P46019 1235 aa21.9■■□□□ 1.1
HDAC7-220ENST00000471235 NUCB2P80303 420 aa21.9■■□□□ 1.1
HDAC7-220ENST00000471235 FAM117BQ6P1L5 589 aa21.9■■□□□ 1.1
HDAC7-220ENST00000471235 C1orf186Q6ZWK4 172 aa21.9■■□□□ 1.1
HDAC7-220ENST00000471235 SRGAP1Q7Z6B7 1085 aa21.9■■□□□ 1.1
HDAC7-220ENST00000471235 IFNLR1Q8IU57 520 aaPredicted RBP21.9■■□□□ 1.1
HDAC7-220ENST00000471235 RAD54LQ92698 747 aa21.9■■□□□ 1.1
HDAC7-220ENST00000471235 INO80BQ9C086 356 aaPredicted RBP21.9■■□□□ 1.1
HDAC7-220ENST00000471235 PCDHA11Q9Y5I1 949 aa21.9■■□□□ 1.1
HDAC7-220ENST00000471235 MYOGP15173 224 aa21.89■■□□□ 1.09
HDAC7-220ENST00000471235 NCLP19338 710 aaKnown RBP21.89■■□□□ 1.09
HDAC7-220ENST00000471235 PTENP60484 403 aa21.89■■□□□ 1.09
HDAC7-220ENST00000471235 KRT85P78386 507 aa21.89■■□□□ 1.09
HDAC7-220ENST00000471235 MAPK7Q13164 816 aa21.89■■□□□ 1.09
HDAC7-220ENST00000471235 AXDND1Q5T1B0 1012 aaPredicted RBP21.89■■□□□ 1.09
HDAC7-220ENST00000471235 FAM43BQ6ZT52 329 aaPredicted RBP21.89■■□□□ 1.09
HDAC7-220ENST00000471235 ADAM2Q99965 735 aa21.89■■□□□ 1.09
HDAC7-220ENST00000471235 NKX2-4Q9H2Z4 354 aa21.89■■□□□ 1.09
HDAC7-220ENST00000471235 POLD4Q9HCU8 107 aa21.89■■□□□ 1.09
HDAC7-220ENST00000471235 CCDC39Q9UFE4 941 aa21.89■■□□□ 1.09
HDAC7-220ENST00000471235 RCOR1Q9UKL0 485 aa21.89■■□□□ 1.09
HDAC7-220ENST00000471235 ATP6V1DQ9Y5K8 247 aa21.89■■□□□ 1.09
HDAC7-220ENST00000471235 MYO9BQ13459 2157 aa21.88■■□□□ 1.09
HDAC7-220ENST00000471235 A0A087X0B3 334 aa21.88■■□□□ 1.09
HDAC7-220ENST00000471235 DENND3A2RUS2 1198 aa21.88■■□□□ 1.09
HDAC7-220ENST00000471235 LRRIQ4A6NIV6 560 aa21.88■■□□□ 1.09
HDAC7-220ENST00000471235 HIP1RO75146 1068 aa21.88■■□□□ 1.09
HDAC7-220ENST00000471235 GUCY2CP25092 1073 aa21.88■■□□□ 1.09
HDAC7-220ENST00000471235 POU5F1BQ06416 359 aa21.88■■□□□ 1.09
HDAC7-220ENST00000471235 MCM6Q14566 821 aa21.88■■□□□ 1.09
HDAC7-220ENST00000471235 GPR153Q6NV75 609 aa21.88■■□□□ 1.09
HDAC7-220ENST00000471235 CATSPER4Q7RTX7 472 aa21.88■■□□□ 1.09
HDAC7-220ENST00000471235 DAW1Q8N136 415 aa21.88■■□□□ 1.09
HDAC7-220ENST00000471235 KIFAP3Q92845 792 aa21.88■■□□□ 1.09
HDAC7-220ENST00000471235 TOP1MTQ969P6 601 aa21.88■■□□□ 1.09
HDAC7-220ENST00000471235 TIFAQ96CG3 184 aa21.88■■□□□ 1.09
HDAC7-220ENST00000471235 NFKBIZQ9BYH8 718 aa21.88■■□□□ 1.09
HDAC7-220ENST00000471235 RGS18Q9NS28 235 aa21.88■■□□□ 1.09
HDAC7-220ENST00000471235 MSRAQ9UJ68 235 aa21.88■■□□□ 1.09
HDAC7-220ENST00000471235 PCDHA7Q9UN72 937 aa21.88■■□□□ 1.09
HDAC7-220ENST00000471235 TLL1O43897 1013 aa21.87■■□□□ 1.09
HDAC7-220ENST00000471235 UPP2O95045 317 aa21.87■■□□□ 1.09
HDAC7-220ENST00000471235 ME1P48163 572 aa21.87■■□□□ 1.09
HDAC7-220ENST00000471235 MBTD1Q05BQ5 628 aa21.87■■□□□ 1.09
HDAC7-220ENST00000471235 CDCA2Q69YH5 1023 aaPredicted RBP21.87■■□□□ 1.09
HDAC7-220ENST00000471235 SHC4Q6S5L8 630 aa21.87■■□□□ 1.09
HDAC7-220ENST00000471235 GPBP1Q86WP2 473 aa21.87■■□□□ 1.09
HDAC7-220ENST00000471235 LEO1Q8WVC0 666 aaPredicted RBP21.87■■□□□ 1.09
HDAC7-220ENST00000471235 LARP4BQ92615 738 aaKnown RBP21.87■■□□□ 1.09
HDAC7-220ENST00000471235 ZBED2Q9BTP6 218 aa21.87■■□□□ 1.09
HDAC7-220ENST00000471235 TIPINQ9BVW5 301 aa21.87■■□□□ 1.09
HDAC7-220ENST00000471235 C1orf112Q9NSG2 853 aa21.87■■□□□ 1.09
HDAC7-220ENST00000471235 AGPAT5Q9NUQ2 364 aa21.87■■□□□ 1.09
HDAC7-220ENST00000471235 STK17AQ9UEE5 414 aa21.87■■□□□ 1.09
HDAC7-220ENST00000471235 TDRD15B5MCY1 1934 aaKnown RBP21.86■■□□□ 1.09
HDAC7-220ENST00000471235 ATG2AQ2TAZ0 1938 aa21.86■■□□□ 1.09
HDAC7-220ENST00000471235 ADGRA3Q8IWK6 1321 aa21.86■■□□□ 1.09
HDAC7-220ENST00000471235 C9IYK1 514 aa21.86■■□□□ 1.09
HDAC7-220ENST00000471235 NAMPTP43490 491 aa21.86■■□□□ 1.09
HDAC7-220ENST00000471235 SARSP49591 514 aaKnown RBP21.86■■□□□ 1.09
HDAC7-220ENST00000471235 HTRA4P83105 476 aaPredicted RBP21.86■■□□□ 1.09
HDAC7-220ENST00000471235 RAD51AP2Q09MP3 1159 aa21.86■■□□□ 1.09
HDAC7-220ENST00000471235 DHX8Q14562 1220 aaKnown RBP21.86■■□□□ 1.09
HDAC7-220ENST00000471235 PPP2R5AQ15172 486 aa21.86■■□□□ 1.09
HDAC7-220ENST00000471235 NAALADL2Q58DX5 795 aa21.86■■□□□ 1.09
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms