RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 DDX46Q7L014 1031 aaKnown RBP5.75□□□□□ -1.49
COL9A1-206ENST00000470652 FILIP1Q7Z7B0 1213 aa5.75□□□□□ -1.49
COL9A1-206ENST00000470652 RNF180Q86T96 592 aa5.75□□□□□ -1.49
COL9A1-206ENST00000470652 TTC9BQ8N6N2 239 aa5.75□□□□□ -1.49
COL9A1-206ENST00000470652 RTF1Q92541 710 aaKnown RBP5.75□□□□□ -1.49
COL9A1-206ENST00000470652 NEIL1Q96FI4 390 aaPredicted RBP5.75□□□□□ -1.49
COL9A1-206ENST00000470652 MEGF9Q9H1U4 602 aa5.75□□□□□ -1.49
COL9A1-206ENST00000470652 OR10A2Q9H208 303 aa5.75□□□□□ -1.49
COL9A1-206ENST00000470652 TMX1Q9H3N1 280 aa5.75□□□□□ -1.49
COL9A1-206ENST00000470652 CAAP1Q9H8G2 361 aa5.75□□□□□ -1.49
COL9A1-206ENST00000470652 MSL2Q9HCI7 577 aa5.75□□□□□ -1.49
COL9A1-206ENST00000470652 SPTLC3Q9NUV7 552 aa5.75□□□□□ -1.49
COL9A1-206ENST00000470652 USP36Q9P275 1121 aaKnown RBP5.75□□□□□ -1.49
COL9A1-206ENST00000470652 NR2E1Q9Y466 385 aa5.75□□□□□ -1.49
COL9A1-206ENST00000470652 PCF11O94913 1555 aaKnown RBP5.75□□□□□ -1.49
COL9A1-206ENST00000470652 GPR42O15529 346 aa5.74□□□□□ -1.49
COL9A1-206ENST00000470652 ARHGAP6O43182 974 aa5.74□□□□□ -1.49
COL9A1-206ENST00000470652 TGM5O43548 720 aa5.74□□□□□ -1.49
COL9A1-206ENST00000470652 PRPF6O94906 941 aaKnown RBP5.74□□□□□ -1.49
COL9A1-206ENST00000470652 LSP1P33241 339 aa5.74□□□□□ -1.49
COL9A1-206ENST00000470652 ADCYAP1R1P41586 468 aa5.74□□□□□ -1.49
COL9A1-206ENST00000470652 RNF151Q2KHN1 245 aa5.74□□□□□ -1.49
COL9A1-206ENST00000470652 KLHDC10Q6PID8 442 aa5.74□□□□□ -1.49
COL9A1-206ENST00000470652 KANSL1Q7Z3B3 1105 aa5.74□□□□□ -1.49
COL9A1-206ENST00000470652 BMP8AQ7Z5Y6 402 aa5.74□□□□□ -1.49
COL9A1-206ENST00000470652 THNSL2Q86YJ6 484 aa5.74□□□□□ -1.49
COL9A1-206ENST00000470652 BCL6BQ8N143 479 aaPredicted RBP5.74□□□□□ -1.49
COL9A1-206ENST00000470652 ZNF610Q8N9Z0 462 aa5.74□□□□□ -1.49
COL9A1-206ENST00000470652 USP7Q93009 1102 aa5.74□□□□□ -1.49
COL9A1-206ENST00000470652 GFM2Q969S9 779 aaKnown RBP5.74□□□□□ -1.49
COL9A1-206ENST00000470652 LOXL4Q96JB6 756 aa5.74□□□□□ -1.49
COL9A1-206ENST00000470652 PTPN18Q99952 460 aa5.74□□□□□ -1.49
COL9A1-206ENST00000470652 KRTAP9-8Q9BYQ0 159 aa5.74□□□□□ -1.49
COL9A1-206ENST00000470652 KIAA1683Q9H0B3 1180 aa5.74□□□□□ -1.49
COL9A1-206ENST00000470652 PUF60Q9UHX1 559 aaKnown RBP5.74□□□□□ -1.49
COL9A1-206ENST00000470652 FAM184BQ9ULE4 1060 aa5.74□□□□□ -1.49
COL9A1-206ENST00000470652 PLB1Q6P1J6 1458 aa5.74□□□□□ -1.49
COL9A1-206ENST00000470652 MATN3O15232 486 aa5.73□□□□□ -1.49
COL9A1-206ENST00000470652 ZEB2O60315 1214 aa5.73□□□□□ -1.49
COL9A1-206ENST00000470652 H2AFYO75367 372 aaKnown RBP5.73□□□□□ -1.49
COL9A1-206ENST00000470652 APOL3O95236 402 aa5.73□□□□□ -1.49
COL9A1-206ENST00000470652 CR2P20023 1033 aa5.73□□□□□ -1.49
COL9A1-206ENST00000470652 SOX5P35711 763 aa5.73□□□□□ -1.49
COL9A1-206ENST00000470652 STAT3P40763 770 aa5.73□□□□□ -1.49
COL9A1-206ENST00000470652 MASP1P48740 699 aa5.73□□□□□ -1.49
COL9A1-206ENST00000470652 MYBPC3Q14896 1274 aa5.73□□□□□ -1.49
COL9A1-206ENST00000470652 TERF2Q15554 542 aa5.73□□□□□ -1.49
COL9A1-206ENST00000470652 KIAA1841Q6NSI8 718 aa5.73□□□□□ -1.49
COL9A1-206ENST00000470652 TAX1BP1Q86VP1 789 aa5.73□□□□□ -1.49
COL9A1-206ENST00000470652 SLC16A11Q8NCK7 471 aa5.73□□□□□ -1.49
COL9A1-206ENST00000470652 CHST13Q8NET6 341 aa5.73□□□□□ -1.49
COL9A1-206ENST00000470652 OR5AN1Q8NGI8 311 aa5.73□□□□□ -1.49
COL9A1-206ENST00000470652 LPPQ93052 612 aa5.73□□□□□ -1.49
COL9A1-206ENST00000470652 LRRC37BQ96QE4 947 aa5.73□□□□□ -1.49
COL9A1-206ENST00000470652 TTC1Q99614 292 aa5.73□□□□□ -1.49
COL9A1-206ENST00000470652 MYL10Q9BUA6 226 aa5.73□□□□□ -1.49
COL9A1-206ENST00000470652 POFUT1Q9H488 388 aa5.73□□□□□ -1.49
COL9A1-206ENST00000470652 EMC7Q9NPA0 242 aa5.73□□□□□ -1.49
COL9A1-206ENST00000470652 MSRAQ9UJ68 235 aa5.73□□□□□ -1.49
COL9A1-206ENST00000470652 DENND2AQ9ULE3 1009 aa5.73□□□□□ -1.49
COL9A1-206ENST00000470652 SYNPO2Q9UMS6 1093 aa5.73□□□□□ -1.49
COL9A1-206ENST00000470652 RAB11FIP3O75154 756 aa5.72□□□□□ -1.49
COL9A1-206ENST00000470652 BPIP17213 487 aa5.72□□□□□ -1.49
COL9A1-206ENST00000470652 ANTXR2P58335 489 aa5.72□□□□□ -1.49
COL9A1-206ENST00000470652 TBR1Q16650 682 aa5.72□□□□□ -1.49
COL9A1-206ENST00000470652 EGFLAMQ63HQ2 1017 aa5.72□□□□□ -1.49
COL9A1-206ENST00000470652 ESPNLQ6ZVH7 1005 aa5.72□□□□□ -1.49
COL9A1-206ENST00000470652 GIMAP8Q8ND71 665 aaPredicted RBP5.72□□□□□ -1.49
COL9A1-206ENST00000470652 CHAC2Q8WUX2 184 aa5.72□□□□□ -1.49
COL9A1-206ENST00000470652 ZNF496Q96IT1 587 aaPredicted RBP5.72□□□□□ -1.49
COL9A1-206ENST00000470652 PITHD1Q9GZP4 211 aaPredicted RBP5.72□□□□□ -1.49
COL9A1-206ENST00000470652 IFT22Q9H7X7 185 aa5.72□□□□□ -1.49
COL9A1-206ENST00000470652 SRRDQ9UH36 339 aa5.72□□□□□ -1.49
COL9A1-206ENST00000470652 OAZ3Q9UMX2 235 aa5.72□□□□□ -1.49
COL9A1-206ENST00000470652 PRKAB1Q9Y478 270 aa5.72□□□□□ -1.49
COL9A1-206ENST00000470652 ADCY10Q96PN6 1610 aa5.72□□□□□ -1.49
COL9A1-206ENST00000470652 EFCAB5A4FU69 1503 aa5.71□□□□□ -1.5
COL9A1-206ENST00000470652 CDK13Q14004 1512 aaKnown RBP5.71□□□□□ -1.5
COL9A1-206ENST00000470652 A0A0A6YYJ9 748 aa5.71□□□□□ -1.5
COL9A1-206ENST00000470652 PATE3B3GLJ2 98 aa5.71□□□□□ -1.5
COL9A1-206ENST00000470652 ADAM15Q13444 863 aa5.71□□□□□ -1.5
COL9A1-206ENST00000470652 DDB1Q16531 1140 aa5.71□□□□□ -1.5
COL9A1-206ENST00000470652 ATP13A4Q4VNC1 1196 aa5.71□□□□□ -1.5
COL9A1-206ENST00000470652 FRMD7Q6ZUT3 714 aa5.71□□□□□ -1.5
COL9A1-206ENST00000470652 DNERQ8NFT8 737 aa5.71□□□□□ -1.5
COL9A1-206ENST00000470652 NKD2Q969F2 451 aaPredicted RBP5.71□□□□□ -1.5
COL9A1-206ENST00000470652 DYDC2Q96IM9 177 aa5.71□□□□□ -1.5
COL9A1-206ENST00000470652 HAPLN2Q9GZV7 340 aa5.71□□□□□ -1.5
COL9A1-206ENST00000470652 C12orf65Q9H3J6 166 aaKnown RBP5.71□□□□□ -1.5
COL9A1-206ENST00000470652 MTG2Q9H4K7 406 aa5.71□□□□□ -1.5
COL9A1-206ENST00000470652 POLR3BQ9NW08 1133 aaPredicted RBP5.71□□□□□ -1.5
COL9A1-206ENST00000470652 KCNG1Q9UIX4 513 aa5.71□□□□□ -1.5
COL9A1-206ENST00000470652 MAGEL2Q9UJ55 1249 aa5.71□□□□□ -1.5
COL9A1-206ENST00000470652 CTDP1Q9Y5B0 961 aaPredicted RBP5.71□□□□□ -1.5
COL9A1-206ENST00000470652 ST20-MTHFSA0A0A6YYL1 179 aa5.7□□□□□ -1.5
COL9A1-206ENST00000470652 PMS2P1A4D2B8 440 aa5.7□□□□□ -1.5
COL9A1-206ENST00000470652 MATN2O00339 956 aa5.7□□□□□ -1.5
COL9A1-206ENST00000470652 CDC14BO60729 498 aa5.7□□□□□ -1.5
COL9A1-206ENST00000470652 CPEP16870 476 aa5.7□□□□□ -1.5
COL9A1-206ENST00000470652 HGFACQ04756 655 aa5.7□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms