RNA–Protein interactions for RNA: ENST00000470356.3

HMG20B-209, Transcript of high mobility group 20B, humanhuman

TSL 1 (best)

Gene HMG20B, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-209ENST00000470356 KRT2P35908 639 aa35.1■■■■□ 3.21
HMG20B-209ENST00000470356 NDUFV1P49821 464 aa35.1■■■■□ 3.21
HMG20B-209ENST00000470356 SMAD4Q13485 552 aaKnown RBP35.1■■■■□ 3.21
HMG20B-209ENST00000470356 EPHA7Q15375 998 aa35.1■■■■□ 3.21
HMG20B-209ENST00000470356 TMEM31Q5JXX7 168 aa35.1■■■■□ 3.21
HMG20B-209ENST00000470356 PDE12Q6L8Q7 609 aaKnown RBP35.1■■■■□ 3.21
HMG20B-209ENST00000470356 RHPN2Q8IUC4 686 aa35.1■■■■□ 3.21
HMG20B-209ENST00000470356 LRRC43Q8N309 656 aa35.1■■■■□ 3.21
HMG20B-209ENST00000470356 RNF169Q8NCN4 708 aa35.1■■■■□ 3.21
HMG20B-209ENST00000470356 TNFRSF25Q93038 417 aa35.1■■■■□ 3.21
HMG20B-209ENST00000470356 MSLNLQ96KJ4 702 aa35.1■■■■□ 3.21
HMG20B-209ENST00000470356 TLE6Q9H808 572 aa35.1■■■■□ 3.21
HMG20B-209ENST00000470356 LZTS1Q9Y250 596 aa35.1■■■■□ 3.21
HMG20B-209ENST00000470356 PPME1Q9Y570 386 aa35.1■■■■□ 3.21
HMG20B-209ENST00000470356 PCDHGC5Q9Y5F6 944 aa35.1■■■■□ 3.21
HMG20B-209ENST00000470356 C19orf67A6NJJ6 358 aa35.09■■■■□ 3.21
HMG20B-209ENST00000470356 GPR37L1O60883 481 aa35.09■■■■□ 3.21
HMG20B-209ENST00000470356 SFPQP23246 707 aaKnown RBP eCLIP35.09■■■■□ 3.21
HMG20B-209ENST00000470356 NEK4P51957 841 aa35.09■■■■□ 3.21
HMG20B-209ENST00000470356 PLCB3Q01970 1234 aa35.09■■■■□ 3.21
HMG20B-209ENST00000470356 NR5A1Q13285 461 aa35.09■■■■□ 3.21
HMG20B-209ENST00000470356 CLLU1OSQ5K130 101 aa35.09■■■■□ 3.21
HMG20B-209ENST00000470356 RBM23Q86U06 439 aaKnown RBP35.09■■■■□ 3.21
HMG20B-209ENST00000470356 POTEDQ86YR6 584 aa35.09■■■■□ 3.21
HMG20B-209ENST00000470356 SLFN12Q8IYM2 578 aa35.09■■■■□ 3.21
HMG20B-209ENST00000470356 TRAIPQ9BWF2 469 aa35.09■■■■□ 3.21
HMG20B-209ENST00000470356 BRMS1Q9HCU9 246 aa35.09■■■■□ 3.21
HMG20B-209ENST00000470356 CLEC1BQ9P126 229 aa35.09■■■■□ 3.21
HMG20B-209ENST00000470356 RAPGEFL1Q9UHV5 662 aa35.09■■■■□ 3.21
HMG20B-209ENST00000470356 C5orf42Q9H799 3197 aa35.09■■■■□ 3.21
HMG20B-209ENST00000470356 FAM205CA6NFA0 338 aa35.08■■■■□ 3.21
HMG20B-209ENST00000470356 NPEPPSP55786 919 aa35.08■■■■□ 3.21
HMG20B-209ENST00000470356 ERVFC1P60507 584 aa35.08■■■■□ 3.21
HMG20B-209ENST00000470356 KCNT2Q6UVM3 1135 aa35.08■■■■□ 3.21
HMG20B-209ENST00000470356 EXOC8Q8IYI6 725 aa35.08■■■■□ 3.21
HMG20B-209ENST00000470356 NSUN7Q8NE18 718 aaKnown RBP35.08■■■■□ 3.21
HMG20B-209ENST00000470356 WRAP73Q9P2S5 460 aaPredicted RBP35.08■■■■□ 3.21
HMG20B-209ENST00000470356 FSCN2O14926 492 aa35.07■■■■□ 3.2
HMG20B-209ENST00000470356 BAG4O95429 457 aaKnown RBP35.07■■■■□ 3.2
HMG20B-209ENST00000470356 EYA4O95677 639 aa35.07■■■■□ 3.2
HMG20B-209ENST00000470356 ATF7P17544 494 aaPredicted RBP35.07■■■■□ 3.2
HMG20B-209ENST00000470356 KSR1Q8IVT5 923 aa35.07■■■■□ 3.2
HMG20B-209ENST00000470356 C4orf19Q8IY42 314 aa35.07■■■■□ 3.2
HMG20B-209ENST00000470356 SLC7A3Q8WY07 619 aa35.07■■■■□ 3.2
HMG20B-209ENST00000470356 MRPS27Q92552 414 aaKnown RBP35.07■■■■□ 3.2
HMG20B-209ENST00000470356 ZNF558Q96NG5 402 aa35.07■■■■□ 3.2
HMG20B-209ENST00000470356 C11orf16Q9NQ32 467 aa35.07■■■■□ 3.2
HMG20B-209ENST00000470356 PUF60Q9UHX1 559 aaKnown RBP35.07■■■■□ 3.2
HMG20B-209ENST00000470356 PPM1AP35813 382 aa35.06■■■■□ 3.2
HMG20B-209ENST00000470356 SPIRE1Q08AE8 756 aa35.06■■■■□ 3.2
HMG20B-209ENST00000470356 ZNF579Q8NAF0 562 aaKnown RBP35.06■■■■□ 3.2
HMG20B-209ENST00000470356 CEP170P1Q96L14 293 aa35.06■■■■□ 3.2
HMG20B-209ENST00000470356 LXNQ9BS40 222 aa35.06■■■■□ 3.2
HMG20B-209ENST00000470356 DHX33Q9H6R0 707 aaKnown RBP35.06■■■■□ 3.2
HMG20B-209ENST00000470356 GLP2RO95838 553 aa35.05■■■■□ 3.2
HMG20B-209ENST00000470356 ALADP13716 330 aa35.05■■■■□ 3.2
HMG20B-209ENST00000470356 RFC5P40937 340 aa35.05■■■■□ 3.2
HMG20B-209ENST00000470356 PHKA2P46019 1235 aa35.05■■■■□ 3.2
HMG20B-209ENST00000470356 COASYQ13057 564 aa35.05■■■■□ 3.2
HMG20B-209ENST00000470356 NLRP4Q96MN2 994 aa35.05■■■■□ 3.2
HMG20B-209ENST00000470356 CDCA3Q99618 268 aaPredicted RBP35.05■■■■□ 3.2
HMG20B-209ENST00000470356 RGL1Q9NZL6 768 aa35.05■■■■□ 3.2
HMG20B-209ENST00000470356 FSD2A1L4K1 749 aa35.04■■■■□ 3.2
HMG20B-209ENST00000470356 NCAPH2Q6IBW4 605 aa35.04■■■■□ 3.2
HMG20B-209ENST00000470356 HELQQ8TDG4 1101 aa35.04■■■■□ 3.2
HMG20B-209ENST00000470356 POP1Q99575 1024 aaKnown RBP35.04■■■■□ 3.2
HMG20B-209ENST00000470356 ZSWIM4Q9H7M6 989 aa35.04■■■■□ 3.2
HMG20B-209ENST00000470356 IFT122Q9HBG6 1241 aa35.04■■■■□ 3.2
HMG20B-209ENST00000470356 SPG21Q9NZD8 308 aa35.04■■■■□ 3.2
HMG20B-209ENST00000470356 COL4A3BPQ9Y5P4 624 aa35.04■■■■□ 3.2
HMG20B-209ENST00000470356 PER2O15055 1255 aa35.03■■■■□ 3.2
HMG20B-209ENST00000470356 SKIP12755 728 aa35.03■■■■□ 3.2
HMG20B-209ENST00000470356 YWHABP31946 246 aaKnown RBP35.03■■■■□ 3.2
HMG20B-209ENST00000470356 POLGP54098 1239 aaPredicted RBP35.03■■■■□ 3.2
HMG20B-209ENST00000470356 KRT17Q04695 432 aa35.03■■■■□ 3.2
HMG20B-209ENST00000470356 DUSP6Q16828 381 aa35.03■■■■□ 3.2
HMG20B-209ENST00000470356 TWF2Q6IBS0 349 aaKnown RBP35.03■■■■□ 3.2
HMG20B-209ENST00000470356 OTUD6AQ7L8S5 288 aa35.03■■■■□ 3.2
HMG20B-209ENST00000470356 SMRP1Q8NCR6 262 aa35.03■■■■□ 3.2
HMG20B-209ENST00000470356 RSPH1Q8WYR4 309 aa35.03■■■■□ 3.2
HMG20B-209ENST00000470356 MRPL9Q9BYD2 267 aaKnown RBP35.03■■■■□ 3.2
HMG20B-209ENST00000470356 PIN4Q9Y237 131 aaKnown RBP35.03■■■■□ 3.2
HMG20B-209ENST00000470356 CATSPER4Q7RTX7 472 aa35.02■■■■□ 3.2
HMG20B-209ENST00000470356 PRPF31Q8WWY3 499 aaKnown RBP35.02■■■■□ 3.2
HMG20B-209ENST00000470356 DYDC2Q96IM9 177 aa35.02■■■■□ 3.2
HMG20B-209ENST00000470356 BARX2Q9UMQ3 279 aaPredicted RBP35.02■■■■□ 3.2
HMG20B-209ENST00000470356 BTBD18B2RXH4 712 aa35.01■■■■□ 3.2
HMG20B-209ENST00000470356 JAK2O60674 1132 aa35.01■■■■□ 3.2
HMG20B-209ENST00000470356 SEC24BO95487 1268 aa35.01■■■■□ 3.2
HMG20B-209ENST00000470356 PBX3P40426 434 aa35.01■■■■□ 3.2
HMG20B-209ENST00000470356 PSPC1Q8WXF1 523 aaKnown RBP35.01■■■■□ 3.2
HMG20B-209ENST00000470356 TMEM143Q96AN5 459 aa35.01■■■■□ 3.2
HMG20B-209ENST00000470356 NGRNQ9NPE2 291 aaKnown RBP35.01■■■■□ 3.2
HMG20B-209ENST00000470356 PCDHA12Q9UN75 941 aa35.01■■■■□ 3.2
HMG20B-209ENST00000470356 FAM86C2PA6NEL3 165 aa35■■■■□ 3.19
HMG20B-209ENST00000470356 GAS2O43903 313 aaKnown RBP35■■■■□ 3.19
HMG20B-209ENST00000470356 ZNF623O75123 536 aa35■■■■□ 3.19
HMG20B-209ENST00000470356 TRIM29Q14134 588 aa35■■■■□ 3.19
HMG20B-209ENST00000470356 CTTNQ14247 550 aaKnown RBP35■■■■□ 3.19
HMG20B-209ENST00000470356 DIS3L2Q8IYB7 885 aaKnown RBP35■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms